Gavialis gangeticus (Gharial): 109291781
Help
Entry
109291781 CDS
T07453
Symbol
EXOSC7
Name
(RefSeq) exosome complex component RRP42 isoform X1
KO
K12589
exosome complex component RRP42
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109291781 (EXOSC7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ggn03019
]
109291781 (EXOSC7)
Messenger RNA biogenesis [BR:
ggn03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
109291781 (EXOSC7)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
109291781 (EXOSC7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
109291781
NCBI-ProteinID:
XP_019364436
LinkDB
All DBs
Position
Unknown
AA seq
291 aa
AA seq
DB search
MASVVLSEAEKVYVVHGVQEDLRVDGRGCEDYRCIEVETDVVSNTSGSARVKLGHTDILV
GVKAEMGTPKLEKPDEGYLEFFVDCSANATPEFEGRGGEELGTEIANTLYRIFSNDSSID
LKSLCINPREHCWILYVDVLLLECGGNLFDAISVAVKAALFNTRIPKVRVLEIEEGSREI
ELSDDPYDCIRLNVENVPCIITLSKIGCRHVVDATLQEEACSLASLLISVTSKGLLTCMK
KLGKGSLDPESIFEMMETGKKVGKVLHASLQKILDKEESLGTTRQKVGFLG
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctgtggtgctgagcgaggcggagaaggtctacgtcgtgcacggggtccaggag
gatcttcgagtagatggccgtggctgtgaagactatagatgcattgaagtagaaacagat
gtggtatcaaacacaagtggatctgcaagggtgaagcttggccacactgacatcttggta
ggagtcaaagctgaaatgggaacgccgaagctggagaaaccagatgaaggttacctggaa
ttctttgttgattgttcagcaaatgctactcctgaatttgaaggccggggaggagaagag
ctgggcacagaaatagcaaatacgttgtacagaatatttagtaatgacagcagcatagat
ctaaaatcgctttgtattaaccccagagaacactgttggattctctatgttgatgtcttg
ttactggaatgtggtggaaatctctttgatgcaatctctgttgcagtgaaggcagctctt
ttcaatacaaggatacctaaagtacgtgttctagagattgaagaaggttcaagagaaatt
gagctgtctgatgacccttatgactgtattcgacttaatgtggaaaatgtaccctgcatc
atcacattaagcaaaattggttgtagacatgtggttgatgctactcttcaggaggaagca
tgctctttggctagcctgcttatttctgtgaccagcaaaggcttgcttacttgtatgaag
aaactaggcaaaggtagtcttgatccagagagtatctttgagatgatggagacaggaaaa
aaggtcggcaaggtgttgcatgcttccctacagaagatcttagacaaagaagaaagttta
gggactacgcgacagaaagttggattcctgggatga
DBGET
integrated database retrieval system
