Gavialis gangeticus (Gharial): 109292123
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Entry
109292123 CDS
T07453
Symbol
LAMB1
Name
(RefSeq) laminin subunit beta-1
KO
K05636
laminin, beta 1
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn04510
Focal adhesion
ggn04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109292123 (LAMB1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109292123 (LAMB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
ATG17_like
F5_F8_type_C
BNR_6
Motif
Other DBs
NCBI-GeneID:
109292123
NCBI-ProteinID:
XP_019364944
LinkDB
All DBs
Position
Unknown
AA seq
1788 aa
AA seq
DB search
MGGLRAGAYGLLLGLWVAVGAAQEPEYSYGCAEGSCYPATGDLLIGRASQLSASSTCGLR
RPEPYCIVSHLQEDKKCFTCDSRDPFHDTLNTDSHRIENVVTTFAPNRLKLWWQSENGLE
NVTLQLNLEAEFHFTHLIMTFKAFRPAAMLIERSSDFGKTWQVYRYFAYDCENSFPGVST
GPMKKVDDIICDSRYSDIEPSTEGEVIFRVLDPAFRIEDPYSPRIQNLLKITNLRIKFTK
LHTLGDNLLDSRMEIKEKYYYAIYDMVVRGNCFCYGHASECAPVEGFSEEVEGMVHGHCM
CRHNTKGLNCEQCLDFYHDLPWKPAEGRNSNACKRCNCNGHSTQCHFDMAVYVTTGNTSG
GVCDDCQHNTMGHNCEQCKPFYFQHPERNIRDPNICEPCTCDPAGSQNGGICDRYTDFSA
GLIAGQCRCKFFVEGERCDICKEGFYGLSSDNPTGCLSCACNPLGTLPGGNPCDSETGNC
YCKRLVTGKHCDQCLPEHWGLSNDMDGCRPCDCDQGGALNNNCSSESGQCECRPHMIGRQ
CNEVEPGYYFISLDHYIYEAEEANFGPGVSIIERQYPQDRTPSWTGIGFVRVPEGAFLEF
YIDNIPYSMEYDILIRYEPQLPDQWEKAVITVSRPGKIPTSSRCGNTIPDDDNQMVSLSP
GSRYVVLPRPVCFEKGLNYTIRLELPQYSILDTEMESPYTLIDSLVLMPYCKSLDIFTVG
GSGEDAVTNSAWETFQRYRCLENSRSVVKTPMTDVCKNIIFSISALLHETALTCQCNPQG
SVSSVCDPNGGQCHCRPNVVGRKCDRCAPGTYGFGPNGCKACECHVQGSVHSFCHSETGQ
CHCFHGVYGRQCDQCLPGYWGFPSCQSCQCNGHADGCDPYTGECLNCRDYTMGHNCERCL
GGFYGDPVLGSGDHCRPCPCPDGPESGRQFASSCYQDPITLQVVCVCNMGYIGSRCEACA
SGFFGNPSEIDGACQECPCNDNIDATDPEACDKQSGTCLKCLYHTEGENCHLCKDGYYGN
ALQQDCRKCVCNYLGTVQEHCSTSEDCKCERTTGQCHCLPNVIGQNCDRCALNTWKLASG
TGCELCDCDIARSFGPSCNEFTGQCQCMPGFGGRTCSECQEFFWGDPDVECQACDCDPRG
IQTPQCNRSTGLCVCNEGVEGPRCDKCTRGYSGIFPDCAPCHQCFALWDIIIRELTNKTQ
RFLDRANALKITGVSGPYQQTLNNLEEKLNEIKNIIAQNPAAEPLKNIGNLFEEAEKLRA
DVTEKITNLEEELSVIALNSNGTDTELSALETDAKSLDRVVKLLAEQLELIKISDVRGAL
DSITKYFQMSLEAEERVNASTLHPDSLVEQSAQLRQEVEDLIHEKEAQFKAKQEEQSHLL
DELAGKLQNLDLSEAAAKTCGTPSGASCAESECGGLNCRTEEGEKKCGGPGCEGLVTMAH
STWQKAMDFDRDVLSALAEIEQLSKLVSEAKLRADEAKQNAQEVLLKTNATKEQVDKSNE
DLRNLIKQIREFLMQESADLDSIETVANEVLTMNMPSTPKELQSLTEDIRKHVESLSDVE
VILEQSAGDIAKAEMLLDEAKKASKSATDVKVTADMVKEALEEAEKAQSAAEKAIKQADK
DIKGTQDLLTSIESENAASEETLNNATQRLTKLEKSMEELKQKAAATSENVEEIEQTVST
VKQNAEEVKQVLDRELNDKYKRVENLVAKKAEESAEVRKKAGILQNEAKALLAQANNKLQ
LLKDLEDTYENNRKVLEDKAKQLVELEETVRSLLQSISQKVAVYSTCL
NT seq
5367 nt
NT seq
+upstream
nt +downstream
nt
atgggcgggttgcgggcgggcgcgtacgggctgctgctagggctgtgggtcgcggttggc
gcggcgcaggagcccgagtacagctacggctgcgccgaggggagctgctacccggccacg
ggcgacctgctcatcggccgcgcctcgcagctgtccgcgtcctccacgtgcgggctgcgg
cggcccgagccctactgcatcgtcagccacctccaggaggacaaaaagtgtttcacgtgt
gactcccgtgatcccttccatgacactctcaacactgatagtcatcgcattgaaaatgtg
gtcacaacgtttgctccaaaccgactgaagctttggtggcagtcagaaaatggtttggaa
aacgtaactctccagctcaatctggaggctgaattccatttcactcatctcatcatgacc
ttcaaggcattccgcccagctgcaatgcttatagaaagatcatctgattttggaaaaacc
tggcaagtatatagatactttgcatatgattgtgagaattcgtttcctggagtttcaact
ggacccatgaagaaagtagacgatatcatttgtgattcccgatattctgacattgagcct
tcaactgagggagaggtcatatttcgtgttttagatcctgcttttagaattgaagaccca
tatagtccaaggattcagaacctattaaagatcacaaatttaagaatcaaattcaccaag
ttgcacactttgggagacaaccttttggattctagaatggaaatcaaagagaagtactac
tatgccatttatgacatggtggttcgtgggaactgtttctgttatggacatgccagtgag
tgtgcaccagtagaaggttttagcgaagaagtggaaggaatggtccatgggcactgcatg
tgcaggcataataccaaaggactaaactgtgaacagtgtttggatttctaccatgattta
ccatggaaaccagctgaaggccgcaatagtaatgcatgtaaaaggtgcaattgcaatgga
cactcaacccagtgccattttgatatggctgtatacgtcacaactggaaataccagtggt
ggagtgtgtgatgactgccaacataacacaatgggacacaactgtgagcaatgcaaacct
ttttacttccagcatccagagagaaatatacgggacccaaacatctgcgagccttgtact
tgtgatccagcgggctcccaaaatggtggaatatgtgatcgttatactgacttttctgct
ggccttattgctggacagtgccgctgtaaattttttgtggaaggggaacgatgtgatatc
tgcaaagaaggattttatggattaagttcagataacccaaccggatgtctatcttgtgca
tgtaatcctttggggactcttcctggagggaatccttgtgattcagagacaggaaactgc
tactgtaagcgactagtaacaggaaagcactgtgaccaatgtttgcctgaacactggggt
ctgagcaatgacatggatggatgtcggccttgtgactgtgaccaagggggagcgctaaac
aataactgctcaagtgaatctggacagtgcgagtgcaggccccatatgattggacgtcag
tgcaatgaagtggaacctggctattatttcatttcattagaccattatatctatgaagca
gaggaagccaactttggtcctggagtgagcatcattgaacgccaatatcctcaagatcgt
accccatcatggactggaataggatttgtaagagtccctgaaggggcattcctggaattc
tacatagacaatattccatattctatggagtatgacattttgattcgttatgagccacag
ttaccagaccaatgggaaaaagctgttatcactgtgtcacgcccaggcaagattccaact
agtagccgatgtggtaacaccattcctgatgatgacaatcagatggtatcgctatcacca
ggctcgagatatgtagtcctcccacgcccagtgtgttttgaaaagggactgaattacact
attcgtctggagctcccacagtattccatcctggatactgagatggaaagtccgtatact
ctcattgattctcttgttcttatgccttactgcaaatcactggacatattcacggttgga
ggctcaggagaagatgcagtcactaacagtgcttgggaaacctttcaaagatatcggtgc
ctggaaaacagcaggagtgtggtgaaaaccccaatgacagatgtctgcaagaatattatt
ttcagtatctctgcattgttacatgagacagcattaacttgccagtgcaaccctcaaggc
tcagtaagttcagtgtgtgaccctaatggaggacaatgtcattgccgtccaaatgttgtt
ggaagaaaatgtgacagatgtgctcctggcacttacgggtttggacctaatggctgcaaa
gcttgtgaatgtcatgttcaaggctctgttcattccttctgtcactctgagactggccag
tgccactgcttccatggagtttatggtcgtcagtgtgatcagtgcttacctggatactgg
ggctttcccagctgtcagtcttgccagtgtaatggccatgcagatggctgtgatccctac
actggggagtgcttgaattgccgcgattacacaatgggtcacaactgtgaaagatgcctt
ggtggcttttatggagatcctgtcctgggatcaggcgatcattgtcggccttgtccttgc
ccagatggcccagaaagcgggcgtcagtttgccagcagctgttatcaggatcctattact
ctacaagttgtgtgcgtctgtaacatggggtacataggaagcagatgtgaggcatgtgct
tctggcttctttggaaaccccagcgagattgatggagcctgccaggagtgcccctgtaat
gacaacatcgatgcgactgacccagaggcctgtgacaagcagtctgggacctgcctgaag
tgcctgtatcatacagagggtgaaaactgtcacctctgtaaagatgggtattatggcaat
gcactgcagcaggactgtagaaagtgtgtctgtaattacttgggcacggtgcaagagcat
tgtagcacctcggaggactgtaaatgtgagagaacaacaggtcagtgccattgccttccc
aatgtaattgggcagaactgtgatcgttgtgcattgaacacttggaagctggctagcgga
actggctgtgaactgtgtgattgtgatatcgctcgttcctttgggccatcatgtaatgag
ttcactggacagtgtcagtgcatgcctgggtttggcggtcgcacctgcagtgagtgtcaa
gagttcttctggggtgatcctgatgtggaatgccaagcttgtgactgcgatccccgtggc
atccagacccctcagtgcaatcgctccacagggttgtgtgtctgtaacgaaggggtcgag
ggccctcgctgtgacaagtgcacccgtggctactccggcatctttcctgactgtgcgcca
tgccatcagtgttttgctctgtgggacattatcatccgcgagctgaccaacaagacccag
aggttcctggacagagcaaatgccctgaaaatcactggggtcagtggcccttatcagcag
acactgaacaacctggaggagaaactgaatgaaattaaaaatatcattgctcaaaatcca
gctgctgagcccctaaagaacattggcaatctcttcgaagaagctgaaaaactcagagca
gatgttacagaaaagataaccaacctagaagaagagctatcggtgatagcactaaatagc
aatggcacagatactgaattgagtgccctcgagacagatgccaagagcttagaccgcgtt
gtgaaactactcgcggaacaactagagttaataaaaatctctgatgtgcgaggagccttg
gatagcatcaccaagtattttcagatgtctctggaggcagaagaaagggtcaatgcttcc
actcttcaccctgacagcctggtagaacagtcagctcaactgcgacaggaagtggaagac
ttgattcatgagaaagaagcccagttcaaggctaaacaagaggagcagtcacacctcctg
gatgaactcgcaggcaagctgcagaatctggatctttctgaagcagctgcaaagacatgt
ggaactccctcaggggcttcctgtgctgaatcagagtgtggcggtttgaactgcagaaca
gaagaaggagaaaagaaatgtggaggcccaggctgtgaggggctggttactatggctcac
agcacgtggcagaaagccatggattttgacagggatgtactcagcgcgttggcagaaatt
gaacagctctccaaactggtctcagaggcaaaattgagagctgatgaagcaaagcaaaat
gcacaagaagttttgctcaaaaccaacgctacaaaagagcaagttgacaaaagcaatgaa
gatctgagaaacctcattaagcaaatcagggaatttctgatgcaggaaagtgcagatctg
gacagcattgagacagttgctaatgaagtgttaaccatgaacatgccaagcacccccaag
gaattgcaatccttgaccgaagatattcgtaagcatgtggaaagcctttctgatgtagag
gttatccttgaacaaagcgcaggagatattgccaaagcggagatgctgctagatgaagct
aaaaaagcaagcaagagtgcaacagatgttaaagtcacggcagacatggtgaaagaagca
ctggaagaagctgagaaagctcaaagtgcagctgaaaaggccatcaagcaagctgataag
gacatcaaaggaacccaggacctgctcacctctattgaatctgaaaatgcagcatctgaa
gaaacactaaacaatgctactcaacgtttgactaagctagagaagagtatggaagagctt
aaacagaaagctgctgctacttcagagaatgtggaagagattgaacaaacagtttctact
gtgaaacaaaatgcagaagaagttaaacaggtactggacagggagttgaatgacaaatat
aaaagagtggaaaacctggttgccaagaaagcagaagagtctgctgaagtcaggaaaaaa
gctggaatactgcaaaatgaagctaaagcactgctggcccaggcaaacaacaaactccag
ctactcaaggatctggaggacacgtatgagaacaatcgaaaagtgttggaagacaaagca
aagcaactggtggagctggaagagacagtgcgctccctcttgcagtccatcagccaaaaa
gttgcagtttacagcacatgcttgtaa
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integrated database retrieval system