Gavialis gangeticus (Gharial): 109292145
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Entry
109292145 CDS
T07453
Symbol
PUS7
Name
(RefSeq) pseudouridylate synthase 7 homolog isoform X1
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
ggn
Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ggn03016
]
109292145 (PUS7)
Enzymes [BR:
ggn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
109292145 (PUS7)
Transfer RNA biogenesis [BR:
ggn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
109292145 (PUS7)
Prokaryotic type
109292145 (PUS7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruD
PUS7L_N
R3H
Motif
Other DBs
NCBI-GeneID:
109292145
NCBI-ProteinID:
XP_019364974
LinkDB
All DBs
Position
Unknown
AA seq
694 aa
AA seq
DB search
MGLGCEAPEILSLLIQRWTLKQPVQRICISFLNRPYILHCALNMETVDMTSVSLKRPHCE
DGEANLDEIKRQKISEEASKTVDGSDLKIDTVAEKSKKLLPEDTKDEIIPNEEGEEQEDE
ELEETDDDGDPESFADMMKHGLTECDVGITKFVSSHKGFSGILKERYSDFVVHEIGKDGH
VSHLDDFTVPVDNEDPSEEVFTVLSDEDKQRLEELQLFKNKETSVAIEVIEDTKEKRTVI
HQAVKSLFPGLETKTEDRDGKKYIVAYHAAGKKALANPRKHSWPKSRGNYCHFVLYKENK
DTMDAINVLSKFLRVKPNIFSYMGTKDKRAITVQEIAVLRITAQRLAHLNKCLMNFKLGN
FSYKSHPLKLGELQGNHFTVVLRNITGTDEQVQQAMQSLKEIGFINYYGMQRFGTTAVPT
YQIGRAILQNNWNEVMDLILKPRPGAEKGYLVKCREEWARTKDPSAALKKLPVKRCVEGQ
LLRGLSKYGMKNIISAFAIIPRNNRLMYIHSYQSYVWNNTVSKRIEEYGLKAVPGDLVLK
GATAVHIEEADVEDYTIHDVVMPLPGFDVIYPKHKIGDAYKEMLTADNLDINNMRHRIRD
YSLSGAYRKIIIRPQNVNWEVVAYDDPKIPLFNTDLDKLEEKPLPVLPKEGKFRALKMEF
SLPPSTYATMAIREVLKMDTSIKNQTQLNTTWLR
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgggtttggggtgtgaagctcctgaaattctgtctttgctgatccagaggtggaccttg
aagcagccagtgcagaggatctgcatttcattccttaaccgaccttatattctacactgt
gccttaaacatggaaactgtagacatgactagtgtatcattgaaacgtcctcattgtgag
gatggagaggctaacttggatgaaattaaaagacagaagatctcagaggaggcttctaag
actgtagatggttctgacctgaaaattgatactgtggctgaaaaatcaaagaaattgttg
cctgaggacacaaaagatgaaataatcccaaatgaggaaggtgaggagcaagaagatgag
gaactggaggaaactgatgacgatggggacccagagagctttgcagacatgatgaagcat
gggctgacagagtgtgatgttggcataaccaaatttgttagctcacacaaagggttttct
ggaatcttaaaagagagatactctgacttcgttgttcatgaaataggaaaagatgggcat
gtaagccatttagatgactttactgttccagtggataatgaggatccttcagaggaagta
tttacagttttgtcagatgaagacaagcaacgtttagaagagctccagctttttaagaat
aaagaaactagtgttgccatagaggtcattgaagacaccaaagagaaaagaacagttatc
caccaggctgtgaagtccttgtttcctgggttagaaactaaaacagaagaccgagatggg
aaaaaatatattgttgcttatcatgctgctgggaaaaaggcactggcaaatccaagaaaa
cactcttggccaaaatctaggggaaactactgtcactttgtattatataaggaaaacaag
gatacaatggatgctattaatgtgctgtcaaagtttttaagagttaagccaaacatattt
tcctacatgggaaccaaagataaaagagctataactgtccaagagattgctgttcttaga
attactgcacaaagacttgcacatttgaacaaatgtttgatgaactttaagttgggaaat
tttagttacaagagccatccactgaaattgggagaactgcaagggaaccatttcacagtt
gttctcaggaatataacaggaactgatgaacaagtacaacaagcaatgcagtctctcaag
gaaattggattcattaattattatggaatgcaaagatttggaaccacagctgttcctaca
tatcagattggaagagctattctacaaaataactggaatgaagttatggatttaatatta
aaaccacgacctggagctgaaaaagggtatttagtaaaatgtagagaagagtgggcaagg
actaaagatccatcagcggccctcaaaaaactacctgtaaaaaggtgtgtggaaggacag
cttctacggggactttcaaagtatggaatgaagaatataatctctgcatttgccataata
ccaaggaataatcgtctgatgtatattcacagctatcagagttatgtatggaataacact
gtgagcaagagaatagaagaatatgggcttaaagctgtaccaggagaccttgtccttaaa
ggagccacagctgttcatattgaggaagcagatgttgaggactatactatccatgatgta
gtgatgccattacctgggtttgatgttatatacccaaagcataaaattggtgatgcctac
aaggaaatgctaactgctgacaatcttgatatcaacaacatgagacacagaattagagat
tattcattgtctggagcttacagaaagatcatcattcgacctcagaatgtcaactgggag
gttgttgcatatgatgatccgaaaatcccattatttaatacggacttggacaaattggag
gaaaaaccattacctgtccttcctaaagagggtaaattcagggccttgaagatggaattc
tctcttcctccttccacttatgctaccatggcaattcgagaagtcttaaaaatggacacg
agtataaaaaaccagacacagctgaatactacatggcttcgctga
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