Gavialis gangeticus (Gharial): 109292390
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Entry
109292390 CDS
T07453
Symbol
DHX35
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35 isoform X1
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
ggn
Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ggn03041
]
109292390 (DHX35)
Enzymes [BR:
ggn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
109292390 (DHX35)
Spliceosome [BR:
ggn03041
]
Complex C
Other components
Complex C specific factors
109292390 (DHX35)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
AAA_22
ABC_tran
DEAD
AAA_19
AAA_30
nSTAND3
AAA_7
Cas3-like_C_2
UPF0203
Motif
Other DBs
NCBI-GeneID:
109292390
NCBI-ProteinID:
XP_019365328
LinkDB
All DBs
Position
Unknown
AA seq
712 aa
AA seq
DB search
MAAPAGPGKFWKPGTEGPGVSISEERQSTSEINGVNIIYNPYASLSIEQQRQKLPIFKLR
NHILYLVENYQTLVIVGETGCGKTTQIPQYLAEAGWTAEGRVVGVTQPRRVAAVSVAGRV
AEERGAMLGHDVGYCIRFDDCTDPQATRIKFLTDGMLVREMMADPLLTRYSVLMLDEAHE
RTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNQNETSDPSKDTSVILTVEG
RTFPVDVFYIQSPVPDYVKSTVETVMKIHQMESDGDILAFLTGQEEVETVVSMLIEQARA
LSRTGMKKHLRVLPLYAGLPSSEQMKVFERVSHSVRKVIVATNIAETSITIHGISSVIDC
GFMKLRAYNPKTAIECLVVVPVSKASANQRAGRAGRNRSGKCYRLYTEEDFEKLPQSTVP
EMQRSNLSPVILQLKALGIDNVLRFPFLSPPPAQSMVQALELLYALGGLDKHCRLTEPLG
MRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNVFVLPPNQKAQATRQHRKFAV
EEGDHLTMLNVYEAFIKHSKSSQWCQEHFLNYKGLVRATIVREQLKKLLVKFKVPKKSSE
GDPDPVLRCIVSGFFANAAKFHSTGAYRTIRDDHELHIHPTSVLYAEKPPRWVVYNEVIQ
TSKYYMRDVTAIESAWLLELAPHFYQQGTVRNRHRPQTHLSLRAKRVKVDDH
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcccgcgggcccggggaagttctggaagccgggcacagaaggtcctggtgtc
agcatctcagaggagagacagagcacttctgaaattaatggtgtaaacatcatctataat
ccttatgcttctctttctattgaacaacagagacaaaagttgccaatttttaagcttaga
aatcacatactgtacctggtggaaaactatcagactctggtgattgttggagaaacagga
tgtggcaaaaccacccagattccacaatacttagcagaagctggctggacggctgaaggg
agggtagttggagtgactcagcctcgcagagttgctgctgtttcagttgcaggccgagtg
gctgaggaaagaggcgctatgctgggtcatgatgttggatattgtattcgttttgatgat
tgcacagaccctcaggctacaagaattaagtttctgactgatggtatgttggtgagggag
atgatggctgacccattactaacaagatacagtgtcctcatgctggatgaagcgcatgaa
agaaccctgtatacagacattgccattggcttattaaaaaagattcaaaagaaacgaggg
gatctgcgactgattgtagcatcggctaccctggatgcagagaaatttagagatttcttc
aatcaaaatgagactagtgaccccagcaaggataccagtgtgattcttactgtggaaggg
agaacttttccagtggatgtcttttatatacagagccctgttccagattatgtcaaatca
actgtagaaaccgtgatgaaaattcaccagatggagagtgatggggatatattggccttt
ctaactggccaggaggaagtagaaactgttgtttctatgctgatagaacaggctcgagcc
ctttctcgtactgggatgaagaaacacctccgtgttctccctttgtatgctgggcttcct
tcctctgagcagatgaaagtatttgagagggtttcacacagtgtcagaaaggtgattgtg
gccaccaatattgctgaaacatccattaccattcatgggatctcatctgtgattgactgt
ggctttatgaaacttcgggcctataatcccaaaacagccattgaatgccttgtagttgtt
ccagtgtcaaaggcatcagctaatcagagagcaggacgtgcaggccgaaaccgctctgga
aaatgttataggctttacacagaggaagactttgagaagttgccacagtccactgttcca
gaaatgcagcggagtaacctgtcacccgtcatattgcagttgaaagctttgggaattgac
aatgtgctcaggttccccttcctctctccaccccctgcacaatcaatggtgcaagctttg
gaattgctgtatgctttaggaggtttggataaacactgtcgtctaacagaacctcttggt
atgagaatagcagagtttcctttgaaccctatgtttgcaaagatgctgctggaatcagga
aattttggctgctcccaggaaatcttgagtattgctgccatgatgcagattcagaatgtg
tttgtgctccctccaaaccaaaaagcacaagctacaaggcaacacagaaaatttgctgtg
gaagaaggcgatcatctcactatgctaaatgtttatgaagcttttattaaacacagcaag
agttctcagtggtgtcaggagcactttctaaactacaaagggcttgtcagagccacaatt
gtgagagagcagctgaaaaagcttcttgtcaaatttaaagtaccgaagaagtccagtgaa
ggtgacccagatcccgttttgagatgtatagtttctggattctttgctaatgcagccaaa
ttccactccacaggagcttataggaccatccgtgatgaccatgaactgcacattcatccc
acctcagtgctgtatgcagagaaacctcctcgctgggtagtctacaatgaggtcatacag
acctccaagtactacatgagagatgtgactgctattgaatctgcttggttattggaactg
gcacctcacttttaccaacaaggaacggtacggaatcgacatagaccccaaacgcacctt
tccttgagggcaaaaagagttaaagtggatgaccattga
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