Gavialis gangeticus (Gharial): 109292412
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Entry
109292412 CDS
T07453
Symbol
SDC4
Name
(RefSeq) syndecan-4
KO
K16338
syndecan 4
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn04512
ECM-receptor interaction
ggn04514
Cell adhesion molecule (CAM) interaction
ggn04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109292412 (SDC4)
04514 Cell adhesion molecule (CAM) interaction
109292412 (SDC4)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
109292412 (SDC4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ggn00535
]
109292412 (SDC4)
Proteoglycans [BR:
ggn00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
109292412 (SDC4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
Peptidase_M50
Motif
Other DBs
NCBI-GeneID:
109292412
NCBI-ProteinID:
XP_019365359
LinkDB
All DBs
Position
Unknown
AA seq
204 aa
AA seq
DB search
MSRCPARALCAAMLLLLLAVAAVSAESVRETMTMDPQLLEEDYSSGALPDDEDVGRSSSE
STIDDDDYDLSGSGDEDDFDVLTSASTVSPVSSSDNYIPEDGGERTKDMNKNPMQNNEIV
PGGVVPLQEENLSNKISMASTGSSSIFERTEVLAALIAGGAVGLLFAIFLILLLVYRMKK
KDEGSYDLGKKPIYKKAPTNEFYA
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgctgcccggcccgtgcgctctgcgccgcgatgctgctgctgctcctggcggtc
gccgccgtctccgccgagtcggtaagggaaaccatgaccatggatccacagctgctagaa
gaagattactcctcaggcgcgttgccagatgatgaagacgttggtcgcagcagttctgaa
agcaccattgatgatgatgactatgatttatcagggtctggtgatgaagatgactttgat
gtcctgacttcagccagcacagtcagtcctgtgagctctagtgataactatatccctgaa
gacggtggggaaaggacaaaggacatgaacaaaaacccgatgcaaaacaatgagatcgtt
cctgggggagttgtgcctcttcaggaagagaacctgtccaacaagatctccatggccagc
acaggcagtagcagcatctttgaaagaacagaagtccttgcagctcttattgcaggtggg
gcagtggggctgctgtttgccatcttcctaattctccttttagtctatcgcatgaagaaa
aaggatgagggcagctatgacctgggcaagaagccaatctacaagaaagcccctacaaat
gaattttatgcttaa
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