Gavialis gangeticus (Gharial): 109292568
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Entry
109292568 CDS
T07453
Symbol
ARHGEF12
Name
(RefSeq) rho guanine nucleotide exchange factor 12
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn04270
Vascular smooth muscle contraction
ggn04625
C-type lectin receptor signaling pathway
ggn04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
109292568 (ARHGEF12)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
109292568 (ARHGEF12)
09153 Circulatory system
04270 Vascular smooth muscle contraction
109292568 (ARHGEF12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ggn04131
]
109292568 (ARHGEF12)
Membrane trafficking [BR:
ggn04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
109292568 (ARHGEF12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PH_13
PDZ
PDZ_6
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
109292568
NCBI-ProteinID:
XP_019365617
LinkDB
All DBs
Position
Unknown
AA seq
1441 aa
AA seq
DB search
MRAGVQTGDRIIKVNGTLVTHSNHLEVVKLIKSGSYVALTVQGRPPGSPQIPLADSEVDP
AAFGHMSPIMTSPHSPGTSGNAERITNPVLMGEENNIVHNQKVEILRKMLQKEQEQLQSL
QEDYSRTPTPRLLKEIQEAKKHIPQLQEQLSKATGSPQDGVLSSRLVAESLQISEVETES
GEGLSKIESSGDGFRPNSDIADSPRSGLKERVYLDESPEKSEIQDTDSQSSIGSPSSRMA
PQIIGAEDDDFDTEHEQINGQCSCFQNMELLKSRPAHLAVFLHHVVSQFDPAALLCYLYA
DLYKQTNSKETRRVFLEFNQLFLDRAANLKVPVPDEVSLDLEKRRPELIPEELHRHYILT
MQDKVLPEIQRNLEDFRQKRSMGLTLAEGELTKLDAERVRDRSVLEKERACAEQIIAKIE
EVLVSSQPLEEDKSSTMQYVILTYMKYLGVRVKEPRSLEQKRGRIGFLPKIKQSIKKEKE
GEEKVKRRGFPSILGPPRRPSRHDSGAIGRAMEMQKQRHPKYLSTASSVSPEPPDSGKTR
QSGSSSDGTDVAYPTANPMSPLTSGPFTSPEASKDSETGPKQTGEVLPSSDSVDGTPRTP
NATFDFPSPPLDHLQEEEGELERTAELGTPKPFRKMESLGYGDVQSEDELYDFDTDTDPP
NWQQLVSRELLLGLKPYEIKRQEVINELFYTERAHVRTLKVLHQVFYQRVSREGILTPSD
LRKIFSNLEDILLLHTGLNDQMKSVRKRKETSVIDQIGEDLLTWFSGPGEENLKHAAATF
CSNQPFALEVIKSRQKKDSRFQTFVQDAESNPLCRRLQLKDIIPTEMQRLTKYPLLLDSI
AKYSELPEEKEKVKKAADHCRQILNYVNQAVKESENKQHLEDYQRRLDLSYLKQAEDPML
DEFRNLDLTKRKMIHEGPLTWKVNRDKTIDLYTLLLEDILVLLQKQDDKLVLRCHSKILA
STADSKHIFSPVIKLNTVLVRQVATDNKAFFVISMSENGAHIYELVAQTVSEKNAWQDLI
AQMAGTVKTEASTRRVIPLPQPGPGEEEREEEEQKLKDEQPDIPASSMQSPDKELGLEPS
LLLKTQSPSAVMSEKSEVEDLLVTERQFGKEQQEDELVLKDSSACYEQATADVPFRVSEE
RWALDALRSLGLLKQLLVQQLGLSEKRTLEDWQHFPRFRTVSQGAWAESGNQGGLQHSDN
NKMHQPGVDRMSVRPGTSEPAACYGIRTSAEFPASQDAVQLVSRDARSGNNVVMDLVSMN
VETPLTELEGVGPDDNGEHFFDAREAHSDDNPSEGEVTERKEDVEVQLRISGNYLILDGY
GTVQESSTDDEVSSLLLQCTAGNTSLDTAQQQHVSPREAQSDGGSSLFAEFMASRWATVE
ESSSGAPSPAFSAESRIQMMQYIRKIEADLEHLKEIEENYATLLRQRLAGSAPTDEHSDK
S
NT seq
4326 nt
NT seq
+upstream
nt +downstream
nt
atgcgggctggagttcagacgggtgatcgaattatcaaggtgaatgggactcttgtaaca
cactcaaatcatttggaggtggtcaagctgatcaagtcgggttcctatgtagctctcact
gtgcaggggcgcccaccagggtcgccccagattccgttagctgattccgaagtggatccg
gcagcattcgggcatatgtcacccatcatgacctctccccattcgcctggcacgtctgga
aatgcagaaaggattaccaacccggtattaatgggggaggagaacaatattgttcacaac
cagaaagtggagattttgagaaagatgttgcaaaaggaacaagagcagctgcagtcctta
caggaagattacagccgaacacccaccccacgactgctcaaggagattcaggaagccaag
aaacacatccctcagctgcaggagcaactgtccaaagccacaggctctcctcaggatgga
gttttgtcctcccgattagtggctgagtctttgcagatcagtgaagttgagacggagagt
ggggaagggctgagcaaaattgagtcaagtggcgatggcttccggccaaacagcgacatt
gctgatagtcctcggagtggcctgaaggagcgagtttacctggatgagagcccagagaag
agcgaaattcaggatactgattcacagtccagtattgggagcccctcctcccgcatggca
cctcagatcatcggagcagaggatgatgactttgacactgaacacgagcagattaatggg
cagtgcagctgtttccaaaacatggagctgttgaagtctcgcccggctcacctagctgtg
ttcctgcatcacgtggtgtcccagtttgaccctgcagccttgctctgctatctctatgcg
gacttgtacaaacagaccaactccaaagagactcgtcgtgtcttccttgagtttaaccag
ttgttcctggaccgagctgcgaacctgaaggtcccagttccagacgaagtttctttagat
ctagaaaagagaaggccagaactcattccagaagagctgcaccgccattacatcctaact
atgcaagataaagtccttccagagatccagaggaatttggaagacttcagacagaagcgt
agcatgggcctgaccttggcagagggcgaactgactaagctggacgcggaacgagtccgt
gaccggagcgtgctggagaaggagagagcatgtgcagagcagataattgccaaaattgaa
gaagttctggtgtcatctcaacctttggaagaggacaagagctccaccatgcagtacgtg
attctcacctacatgaaatacttgggggtgagagtcaaagagccccggagtctggagcag
aagcgtggacgtattggtttcctgccaaagattaagcaaagtataaagaaagagaaagaa
ggggaggaaaaggtgaagaggagaggtttccctagcatcctgggaccgccgagaagaccg
agtcgccatgacagtggtgcaattggcagagccatggaaatgcagaagcagcgccatcca
aagtacttatccacagcctcttctgttagcccagagccaccagactctggcaaaacacgc
cagagtggatcttccagcgatggcacagatgtagcatacccaactgctaatcctatgtct
cccctgacttcgggaccttttacctccccagaggcaagcaaagatagtgagacaggcccc
aagcagactggagaagttctaccatctagtgactctgtggatggcaccccccgcacacct
aatgccacctttgatttcccttccccacccctggaccacttgcaggaagaggagggagaa
cttgagagaacagctgagttgggaacaccaaaacctttccgcaagatggagagcttgggc
tatggggatgtccaaagtgaggatgaactgtatgattttgatacagacactgatcctccc
aactggcagcagcttgtgagtcgagagttgctgctggggctgaaaccctatgaaatcaaa
cgccaagaagtgattaatgagctgttttacacagagcgagctcatgtccgcacgctgaag
gttctgcatcaggtcttctaccagcgcgtctcccgtgaagggatcctcactccctcggat
ctgcggaagatcttttccaacctggaggacatccttctgctccacactggcttgaacgat
cagatgaaaagtgtccgaaaaaggaaggagacatcggttattgatcagattggagaggac
ttactaacttggttcagtggaccaggagaggagaacctgaaacatgcagcagccaccttc
tgtagtaaccagccctttgctttagaggtgatcaaatcacggcagaagaaggactcgcgc
ttccagacctttgtgcaggatgccgagagtaatccgctgtgtcgccggttgcaattgaag
gatatcattcccactgagatgcagagactgactaaatacccccttctgttggatagtatt
gctaagtattcagaactgcctgaggagaaggagaaagtgaagaaagcagcggatcactgc
cgtcaaatccttaactatgtgaaccaagctgtcaaagagtcggagaacaagcagcattta
gaagattatcagcgtcgtctcgacctgtcttacctgaagcaggcagaagaccctatgctg
gatgagtttcggaatttagatttaaccaagcggaagatgattcacgaaggacctctgact
tggaaggtgaatcgggacaagactatagatctctacaccttgctcttggaagatattctg
gtgctgttgcaaaagcaagatgacaaactggtgctgcggtgtcacagtaagatcctggca
tctactgctgacagcaagcacatattcagccctgtgatcaagctgaacactgtgctagtt
cgccaggtggcaacagataacaaagctttctttgtcatctccatgtcagaaaatggcgcc
catatttacgaactagtggcgcagaccgtttcggaaaaaaacgcatggcaggacctgata
gctcagatggcagggacagtgaaaactgaggcttccaccagaagggtgataccattacca
cagccagggcctggcgaagaagagcgtgaggaagaggagcagaagttgaaagatgagcag
cctgatattccagccagcagcatgcagagtccagataaagagttgggccttgagccttcc
ctcttactgaagacccagtctccttcagctgtcatgtcagagaagtctgaagtagaagat
ctcctcgtgacagagaggcagtttggcaaagagcagcaggaagacgagcttgtgctgaaa
gactcctctgcgtgctacgaacaagcgaccgcagacgtgcctttccgagtctcagaagag
cggtgggcactggatgcgttaaggagcttgggcttgttgaaacagttgttggtgcagcag
cttggcttgtcggagaagaggacccttgaagactggcagcattttcccaggtttaggaca
gtttcccaaggtgcttgggcagaaagtggaaaccagggtggactgcagcactctgataat
aacaagatgcaccagcctggagtggaccggatgtctgtcagacctggaactagtgaaccc
gcagcttgttacggtatccggacttcagctgaattcccagcttcacaggatgccgtgcag
ctggtatctagagacgccaggtcaggtaataatgtagtaatggaccttgtaagcatgaac
gtggagaccccgctcacggagctggaaggagtgggtcctgatgacaatggagagcacttc
tttgatgcccgcgaggcccacagcgacgacaacccgtccgaaggagaagtgacggaaagg
aaggaggatgtggaggtgcagttacggatctcaggaaattatttgatccttgacggatat
ggaacggtgcaggaaagctccacggacgacgaggtgtcttcgctactcctacagtgcact
gcaggcaacacctctctggacactgcgcagcagcaacacgtttcccccagggaggcccag
tcggacggggggagctccctgtttgccgagttcatggcctcccgctgggcgactgtggag
gagtccagctccggagcaccaagccccgccttctctgcagagtcacgtatccagatgatg
cagtacattcgcaagatcgaggctgaccttgaacacttaaaggagatcgaggaaaattat
gccactctccttcgccaaaggctggctggatcagcccccacagatgagcactcagacaaa
agttag
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integrated database retrieval system
