Gavialis gangeticus (Gharial): 109292574
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Entry
109292574 CDS
T07453
Symbol
SOX18
Name
(RefSeq) transcription factor SOX-18
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
ggn
Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ggn03000
]
109292574 (SOX18)
Transcription factors [BR:
ggn03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
109292574 (SOX18)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sox17_18_mid
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
109292574
NCBI-ProteinID:
XP_019365627
LinkDB
All DBs
Position
Unknown
AA seq
314 aa
AA seq
DB search
MNAFMVWAKDERKRLAQQNPDLHNAVLSKMLGQSWKALSTSDKRPFVEEAERLRLQHLQD
HPNYKYRPRRKKQAKKIKRMEPNILLHNLSQPCSDSFGMNHHSGSQPAHHQPPPLNHFRE
LHSMGSDIENYGLPTPEMSPLDVLEQTEPAFFPPHMQEDCSMMPFRGYHPHHQMEFPQDK
SIGRDMAMPYAQTPSHLTDAMRTPHPSSIYYNQICSGPQNGLSTHLGQLSPPPESHHLDS
VDHLNQTELWTDVDRNEFDQYLNMSRTRPEPSGLPYHVSLSKVTPRSISCEESSLISALS
DASSAVYYSPCITG
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccttcatggtgtgggccaaggacgagcgcaagcgcctggcgcagcagaacccc
gacctgcacaacgccgtgctcagcaagatgctgggccagtcgtggaaagccctgagcacc
agtgacaagcgccccttcgtggaggaggcagagaggctgaggcttcagcatctgcaagat
caccccaactacaagtaccgcccaaggagaaagaagcaagccaagaaaatcaagaggatg
gaacccaatatccttctccataacctttcccagccttgcagtgacagcttcggcatgaat
catcacagtggcagccagcctgcccaccaccagcctcccccacttaaccacttcagagaa
ctccactccatggggtcagatattgaaaactatggcttgccaactcctgagatgtctccc
ttggatgtcttggaacagaccgagccagcgtttttccctcctcacatgcaggaggactgc
agcatgatgccctttagaggctaccacccccatcaccagatggagtttccccaagacaag
tccattgggcgggacatggcgatgccgtacgctcagaccccatcgcatttgaccgatgct
atgaggactccccacccatctagcatatactacaaccaaatatgctctggacctcagaat
ggcctttcgacccatctgggccagctgtcaccccctcctgagtcccaccaccttgacagt
gtagatcacttgaatcaaactgagctttggacagatgttgaccgcaatgagtttgaccag
tatttgaacatgagcaggactcgtcctgaaccttcaggactcccttaccatgtctccctg
tccaaagtgactcctagaagtatctcctgtgaggagagcagtttgatatctgcattgtcc
gacgccagcagtgccgtctactatagcccctgcatcacaggttag
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