Gavialis gangeticus (Gharial): 109292622
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Entry
109292622 CDS
T07453
Symbol
TAF4
Name
(RefSeq) transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109292622 (TAF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ggn03021
]
109292622 (TAF4)
03036 Chromosome and associated proteins [BR:
ggn03036
]
109292622 (TAF4)
Transcription machinery [BR:
ggn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
109292622 (TAF4)
Coactivators
SAGA/TFTC/STAGA complex
109292622 (TAF4)
Chromosome and associated proteins [BR:
ggn03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
109292622 (TAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
tRNA-synt_1c
Motif
Other DBs
NCBI-GeneID:
109292622
NCBI-ProteinID:
XP_019365705
LinkDB
All DBs
Position
Unknown
AA seq
1107 aa
AA seq
DB search
MAAGSDLLDEVFLNTEVDEKVVSDLVGSLESQLAASAHHHPPHKAQEPLRAAGGLLGNHV
VSGSGSGGSSPSPSPAGAGAGGGGAHVHSEGGGKMGLSAPEVPKAGAGGVQGGVINHNTR
SQSSALDGATTTSTSTTTAAATAAAAGGGGGSEVTAAPGTLSQGKSVVISTMATSLSTRN
GKIGTTTVQTLNGSNVVMNSHHSGSAAFSGTPATANPVSAPAVAPLVNNGPGSVGKANTV
NAVLPSASSTVIQTSFLSTAVSSASSSPTVISSQPPPSIGSGGATVALVRPPIHTAGPTV
AAAAAATQNGSNTVINSTISVGNFPAVAAATVGSGVALQTSLVNSQPGSSVSAAPTTQVI
KSESPKTIVQAVSQQQTLAASGQPSTTGGNMIIGQTMQAGLSNVAPNPGGIPPAAPGTPT
GMAKGTANTVAQNLPRTPAATTSGIRATLTPTVLAPRLPQPPQNPTNIQNFQLPPGMVLV
RSENGQFLMIPQQALAQMQAQAHAQSQSQNTMTPRPATPTSASPVQISAVQAPGAPIIAR
QVTPTTIIKQVSQAQTTVQPTTTLQRPPVVQPQIVLGGTAQTTTLGTATAVQTGTAQRTV
QGATAASTAATETMENVKKCKNFLSTLIKLASSGKQSTETAANVKELVQNLLDGKIEAED
FTSRLYRELNSSPQPYLVPFLKRSLPALRQLTPDSAAFIQQSQQQQPTTQATTALTAVML
SGSVQRTAGKATATVTSTLQQPVISITQPTQVGVSKQGQSTPLVIQQSQKAGTLIRPPQV
TLTQTPMVTLRQPHSRIMLTTPQQIQLNQLQTVPVVKPTVLPGSKAISTISMQAAAAQKN
KLKEPGGGSFRDDDDINDVASMAGVNLSEESARILATNSELVGTLTRSCKDEAFLFSAPL
QRRILEIGKKHGITDIHPDVVSYVSHAAQQRLQNLVEKLSETAQQKNISYKDDERYEQAS
DVRAQLKFFEQLDQIEKQRKDEQEREILMRAAKSRSRQEDPEQLRLKQKAKEMQQQELAQ
MRQRDANLTALAAIGPRKKRKVDSPGSGSGTEGSGTSSAVPGSSGVGTTRQFTRQRITRV
NLRDLIFCLENERETSHSLVLYKAFLK
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggctcggatctgctggatgaggttttcctgaacacggaggtggacgagaag
gtggtgagcgacctggtgggctccctggagtcgcagctggcggcctccgcccaccatcac
ccgccccacaaggcgcaggagccgctgcgggccgccggggggctgctggggaaccatgtt
gtgagcggcagcggcagcggcggcagcagcccgagccccagcccggcgggagcgggagca
ggaggcggcggcgcccatgtccacagcgagggcggaggcaagatggggctcagcgccccc
gaggtccccaaagcaggcgctggaggagtgcaagggggtgttattaaccataacaccagg
tcccagagttcagctctggatggagctacaacgaccagcaccagcaccaccactgcagca
gctacagcagcagctgcaggaggaggaggaggatctgaagttactgctgctccagggacc
ctcagtcagggcaaatcggtggttatcagcaccatggcaacctccttgtccaccaggaat
ggcaaaattgggaccacaaccgtgcaaactttgaatgggagtaatgtggtgatgaactct
caccactccggaagtgctgctttctctgggactcctgcaactgctaatcctgtttctgca
cctgctgttgcccctctagttaacaatggacctggatcggtggggaaagcaaatactgtt
aatgctgttttgccatcagcttccagcactgtcatccagacttctttcctcagcactgct
gtctcctctgcctcttcctcacccacggtgatctcctcacagccaccaccaagcattgga
agcgggggggctactgtagcactggtgaggccaccgattcatacagcaggacccacggtt
gctgcagctgctgcagccacccagaatgggagcaatactgtgatcaattcaaccatcagt
gtggggaattttcctgctgttgctgcagccactgtgggatctggagttgccctccagaca
tcgcttgtgaacagccaacctggttccagtgtgtcggcagcccccaccacgcaggtcatc
aaatcagagtctcctaaaactatagtgcaggcagtttcccaacagcagacactggctgct
agtggccagcccagtactacagggggtaacatgatcattgggcaaactatgcaagctggg
ctctctaatgtggcccccaatcctggtgggatacctccagcagctcctggtactcctacg
gggatggctaagggcactgccaatacagtggcacaaaatctgccaaggactccagcagca
acgacaagtggtatcagagcaactttgactcctacagttttagcacctcgtctgcctcag
ccacctcagaatccaactaatattcagaactttcagttgccgccaggcatggtccttgta
cgtagtgagaatgggcagttcctgatgattcctcaacaagcattggcacagatgcaggca
caggcacatgcccagtcccagtctcagaataccatgactcctcgtccggcaacacctacc
agtgcttctccagtacagatttcggcagtccaggctcctggagcacctattattgcacgg
caggtgacaccaactactattatcaaacaagtctctcaggctcagacaactgtacaaccc
acaacaacgctacagcgtcctcctgtagtacagcctcagattgttctgggtggtactgcg
caaacaactacattaggaacagcaacagctgtacagactggaactgctcaaagaacagtg
caaggagcaacagcagcctccactgctgccacagaaactatggaaaatgtgaagaaatgc
aagaattttctgtccacattaataaaactggcttcatctggaaaacagtctacagaaact
gcagcaaatgtcaaagagctagtgcagaacttgttggatggcaaaatcgaagcggaagat
tttaccagtaggctgtaccgagaacttaattcttcacctcagccttaccttgtgcctttc
ctgaagaggagtttacctgccttgagacagttaaccccagactcagcggcttttattcag
caaagtcagcagcagcagcccacgacgcaagcaacaactgctcttacagcagtgatgctg
agtggctcagttcagcgcacagcggggaaggccactgccactgtaacgagtactcttcaa
caacctgtaatcagtataacacagcctacgcaagttggggttagcaaacaagggcaatct
acaccactggttatccaacagtctcaaaaagcagggacattaataaggcctccacaggta
acgttgacacaaacccctatggtaacactgcggcaaccccatagtcgtattatgctcaca
actcctcaacaaattcaattgaatcaacttcagacagtacctgtggtaaaaccaacagta
ttacctggaagcaaagctatttccactatttcaatgcaagcagctgccgctcagaagaat
aaattgaaagaacctggaggaggttcttttagggatgatgatgatattaatgacgttgca
tcaatggctggagtcaacctatcagaagagagtgcacggatattggcaacaaactctgaa
ttagtgggcacgttaacaaggtcttgtaaagatgaagccttcctcttttcagcacctttg
caaagaaggatattagaaataggtaaaaaacatggaataacggatatccatcctgatgta
gttagctatgtgtctcatgccgcacaacagcgattacaaaatcttgtggaaaaattatca
gagactgcccagcaaaagaatatttcttacaaggatgatgaaagatatgagcaagcaagt
gatgttcgggctcagctcaagttctttgaacaacttgatcaaatagaaaaacagagaaaa
gatgaacaagaaagggaaattttaatgcgcgcagcaaagtctcggtctagacaagaagat
ccggaacaacttaggttgaaacagaaggccaaggagatgcagcaacaagagctagcacaa
atgagacagagggatgccaacttaactgcattagctgcaattggtcctaggaagaaaagg
aaagttgattcaccaggatctgggtcggggacagagggatccggtacaagctcagcagtc
ccaggcagttctggagttggaacaaccaggcagtttacgcgacaaaggataacgcgggtg
aacctcagggacctcatattttgtttagaaaatgagcgcgagacaagccattcactagtg
ctatataaagcattccttaagtaa
DBGET
integrated database retrieval system
