Gavialis gangeticus (Gharial): 109292649
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Entry
109292649 CDS
T07453
Symbol
CTCFL
Name
(RefSeq) transcriptional repressor CTCFL
KO
K23195
transcriptional repressor CTCF
Organism
ggn
Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ggn03000
]
109292649 (CTCFL)
03036 Chromosome and associated proteins [BR:
ggn03036
]
109292649 (CTCFL)
Transcription factors [BR:
ggn03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
109292649 (CTCFL)
Chromosome and associated proteins [BR:
ggn03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
109292649 (CTCFL)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_6
zf-C2H2_ZN142
C2CH-3rd_BIRD-IDD
zf-C2H2_7th_ZNF462
zf-C2H2_15
DUF7479
zf-AtTam37
zf-C2HE
Zn_ribbon_8
zf-C2H2_11
Zn_ribbon_Nudix
Motif
Other DBs
NCBI-GeneID:
109292649
NCBI-ProteinID:
XP_019365743
LinkDB
All DBs
Position
Unknown
AA seq
382 aa
AA seq
DB search
MSSLNRHMKIHSDEKPHLCHLCLRAFRTVTLLRNHMNTHTGTRPYKCSDCDMAFVTSGEL
ARHRRYKHTLEKPFKCTLCKYCSVEASKLKRHIRSHTGERPYHCSLCSYASKDTYKLKRH
MITHSGEKPYQCYVCQARFTQSGTMKIHILQKHSENVPRHQCPHCETVIARKSDLRVHLR
NLHSHLAVALKCSYCEAVFHERYALIQHKKTHRNEKKFKCDQCSYACKQERHLIVHKRIH
TGEKPFICLCCSKCFRQKQLLTVHFRKYHDSDFKPTVFECPKCGKSYSRWSNMHKHAETC
GFTRANAVRSSKGSKGKKKRCRSLEYAKQEAVDQGSFQDASIMNMEDCGTEIVPVTYDIE
MTTPREQKTEMTCEMLFNTMDK
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagccttaaccgccacatgaaaatccattctgatgaaaaaccccacctgtgccat
ctctgcctaagggctttccgtacagttactctcctgcgtaaccacatgaacacacataca
gggaccaggccatataaatgcagtgactgtgacatggcatttgtgaccagcggtgagctt
gcacgacacaggcgttataagcatactctagaaaagccctttaagtgcacactgtgtaaa
tactgtagtgtagaagcaagcaaattgaagcggcacatccgctcacacacaggagagcgt
ccttaccactgctctctctgtagttatgctagtaaggatacctataagctgaaaagacac
atgataactcattcaggtgaaaaaccatatcagtgttatgtttgtcaggcaagattcaca
caaagtggcaccatgaaaatccacatattgcagaagcatagtgaaaatgtaccaagacat
cagtgtccacattgtgagacagttattgcaaggaaaagtgacttacgtgtccacttacga
aacctgcattcccacctggctgtggccttgaagtgcagttactgtgaagcagtcttccac
gagcgctacgctctcattcagcacaagaaaacgcatagaaacgagaagaaattcaaatgt
gatcagtgcagctatgcgtgcaagcaggaacgacatttgatcgtgcataagcgcatccac
actggcgagaagcccttcatttgtctgtgttgcagtaaatgtttccgacagaagcagctt
ctgactgttcatttcaggaaataccatgattctgattttaaaccaacagtttttgagtgt
cctaagtgtggcaagagctactcacgctggagtaacatgcataagcatgctgaaacctgt
ggatttacgagagcaaacgctgttagatccagcaaaggaagcaagggtaaaaagaagaga
tgtaggagcctagaatatgctaagcaagaagctgttgatcagggatcattccaagacgct
tccattatgaacatggaggattgtggcactgagattgttcctgtcacatatgacatagaa
atgactaccccaagggagcagaaaacagaaatgacatgtgaaatgctcttcaacacgatg
gacaaataa
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