Gavialis gangeticus (Gharial): 109293145
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Entry
109293145 CDS
T07453
Symbol
DDX52
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
ggn
Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ggn03009
]
109293145 (DDX52)
Enzymes [BR:
ggn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109293145 (DDX52)
Ribosome biogenesis [BR:
ggn03009
]
Eukaryotic type
90S particles
Helicases
109293145 (DDX52)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
AAA_19
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
109293145
NCBI-ProteinID:
XP_019366494
LinkDB
All DBs
Position
Unknown
AA seq
605 aa
AA seq
DB search
MDSHALFRRLGAGARFDVKRFSRDARRFGVVKGPGPGSVAPASLDFFSVRETGPLSTPGT
DGAAAWTPAAESPGWVGKPTSDSVNGSSCVLMFLGLERKRTRESESSRGKKKKKTSETIS
ASELPENDGILWMSSLEAKLKNTREMGEKKPTAEKLEQLRQEKINHFRNKYKINVQGTDL
PEPIATFEQLQKEYKIHPKIMQNVESAGFQVPTPIQMQAIPVMLHGRELLASAPTGSGKT
LAFSIPILTHLKQPMNKGFRALIISPTRELASQTHRELVKLSEGTGFRIHMIHKAAEAAK
KFGPKSSQKFDVLVTTPNRLIYLLKQDPPAIDLTRVEWLVVDESDKLFEDGKSGFRDQLA
SIFLACTSHVIKRAMFSATFAHDVEQWCKLNLDNVILVSVGARNSAAETVEQELLFVGSE
TGKLLAVRELVKKGFTPPVLVFVQSIERAKELFHELIYEGINVDVIHADKTQQQRDNIVH
SFRAGKIWVLICTALLARGIDFKGVNMVINYDFPTSAVEYIHRIGRTGRAGHTGKALTFF
TEDDKPLLRSVASVIQRAGCPVPDYIKHFRKLQSKQKKKFIKKPLEREHIRTMPQYFLEK
AKRKK
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggattcgcacgcgctgtttcgccgcctgggcgcgggcgcccgcttcgacgtgaagcgc
ttcagccgcgacgcgcggcgcttcggggtggtgaaaggccccggcccgggctcggtggcc
cccgccagcctggacttcttcagcgtgcgtgagactgggcccctgagtacccctgggaca
gacggcgctgcagcctggacgcctgctgcggagtcaccaggttgggtcgggaagcccacg
tctgactcagtaaatggcagttcttgtgttcttatgtttttagggctcgaaaggaagaga
acaagagaaagtgagagttccagggggaagaaaaagaagaaaacctcagaaactatttct
gcgtcggaacttcctgaaaatgatgggatattgtggatgtcctcgttggaagcaaagctt
aaaaatacaagagaaatgggagaaaagaaacccactgcagaaaaactggaacagctcaga
caggaaaagataaaccatttccgaaacaagtacaagattaatgtgcaaggtacagatctt
cctgaaccaattgccacatttgagcaacttcaaaaggagtataaaatccaccctaaaata
atgcagaacgttgaatctgctggcttccaggtccccacgccaattcagatgcaagccatt
cctgtcatgcttcatggtcgggaactcctggcttcagctcctactggatctgggaagacc
ttggcttttagcattcctatcttaacacatctgaaacaaccgatgaacaaaggatttaga
gcactgatcatctctcctactagagaacttgctagtcaaacacacagagagctggtaaag
ttgtctgagggaacaggcttcagaatacatatgatccataaagcagctgaagcagccaag
aagtttgggcccaaatcatctcagaagtttgatgtgctagtgaccactccaaacagactc
atttatttactaaaacaagatcctccagcaatagatttgaccagggttgagtggctggtg
gtggacgagtcggacaaactctttgaagatgggaagtcagggttccgtgaccagctggcc
tccatcttcctggcttgcacatctcatgtcatcaaaagagctatgttcagcgcaactttt
gcacatgatgtagagcagtggtgtaaactcaacctggataatgtcattttggtgtcagtt
ggagcaagaaactctgcagcagagacagtggaacaagagctcttgtttgttggatcggag
acaggaaagctgctggcagtgagagaactggttaaaaagggtttcacgcctcctgtactt
gtttttgtgcagtccatcgaaagggctaaagagcttttccatgagcttatttatgaaggt
atcaatgtggatgttatccatgctgacaaaacgcagcagcagagagataacatagtgcac
agttttagagctgggaagatttgggtgcttatatgcacggccttgctggcccgagggatt
gacttcaaaggagtgaatatggtcattaactatgacttcccaaccagtgctgtggaatat
attcacaggataggtcggactgggagagcaggacatacgggaaaagcactcactttcttt
actgaagatgacaaacctttattacgaagtgtagctagtgttattcagcgggctggctgt
cctgtgccagactatataaaacacttccgtaaactgcaaagcaaacaaaagaagaaattt
attaagaagccactggaaagggagcacattcgtaccatgcctcagtacttcttagaaaaa
gcaaaaaggaaaaagtaa
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