Gavialis gangeticus (Gharial): 109293286
Help
Entry
109293286 CDS
T07453
Symbol
MED13
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13 isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
ggn
Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ggn03021
]
109293286 (MED13)
Transcription machinery [BR:
ggn03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
109293286 (MED13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Motif
Other DBs
NCBI-GeneID:
109293286
NCBI-ProteinID:
XP_019366667
LinkDB
All DBs
Position
Unknown
AA seq
2177 aa
AA seq
DB search
MSSCFVPNGASLEDCHSNLFCLADLTGIKWKRYVWQGPTSAPILFPVTEEDPILSSFSRC
LKADVLSVWRRDQRPGRRELWIFWWGDDPNFADLIHHDLAEEEDGVWENGLSYECRTLLF
KAVHNLLERCLMNRNFVRIGKWFVKPYEKDEKPINKSEHLSCSFTFFLHGDSNVCTSVEI
SQHQPVYLLSEEHLTLAQQSNSPFQVILSPFGLNGTLTGQSFKLSDSSTKKLIGEWKQFY
PITSNLKEGSEEKQEEMDWEDDSLAAVEVLVAGVRMVYPACFVLVPQTDIPAPSTVGASH
CSTTCLGVHQVPATTRDPAMSSVTLTPPTSPEEVQTAVDAQSAQKWVKFSSVSDGFSSDS
TSHHGGKIPRKLANQVVDRVWQECNMNRAQNKRKYSATSNGLCDEETADKVASWDFVEAT
QRTNCNCSRHKNLKPRNSGQQGQAPPASQQQQAAPKHKTNEKQDKGDKPQKRPLTPFHHR
VSISDDVAMEAESASQRLVITAPDSQVRFSNIRTNDVAKTPQMHGTEMANSPQPPPLSPH
PCDVVDEGVTKTPSTPQSQHFYQMPTPDSLVPSKTMEDRIDGLSQSFPAQFPEVIEPTIY
IGTAVNLEEDEADNTWKYYKVPKKKDVEFLPPPLPCDKFRDDPVVPAGQENLTSVTELMV
QCRKPLKVSDELVQQYQSKNQYLTAVASETDQEPEIDPYAFVDGDVEFLFPDNKKERQNN
ERETGKKHKAEDGTSNVTVLSHEGEDAMSLFSPSVKPEQRIAAHARTASTSLIHETDLVV
SYTDLDNLFNSDEDELTPGSKRTVNGSDDKPNCKESKTGNLDPLSCISTADLHKMYPTPP
SLEQHIMGFSPMNMNNKEYGSMDTTLGGTVLEGNSSSIGAQFRIEVDEGFCSPKPSEIKD
YSYVYKPENCQALVGCSMFAPLKTLPSQCLPPIKLPEECVFRQSWAVGKLELLPPGPAMP
FIKEGDGSTMDQEYGPAYTPQTHTPFGMPPSSAPPSNSGAGILPSPSTPRFPTPRTPRTP
RTPRGGGGPASAQGSVKYENSDLYSPASTPSTCRPLNSVEPATVPSIPEAHSLYVNLILS
ESVMNLFKDCNFDSCCICVCNMNIKGADVGVYIPDPTQEIQYRCTCGFSAVMNRKFGNNS
GLFLEDELDILGRNTEGGKEAEKRFEALRAPSVEHGGGGLKEPEKLPDELILLLQDQCTN
LFSPFGAADQDPVPKVGAVSNLVRVEERDCCNDCYLALEHGRQFMDNMSGGKVDEALVKS
TCLHHWSKRNVVDVSMQCSQDILRMLLSLQPVLQDAIQKKRTVRSWGVQGPLTWQQFHKM
AGRGSYGTDESPEPLPIPTFLLGYDYDFLVLSPFALPYWERLMLEPYGSQRDVAYVVVCP
ENEALLNGAKSFFRDLTAIYEXCRLGQHRPICKLLPDGIMRVGSTASKKLSEKLVAEWFS
QAANANNEAFSKLKLYAQVCRYELGPYLASQPLDSSLLSQINLVPPASQSVSIQPQAAGN
TGNSNTPSSTPAAATSSTMTSNSAMSSAATTTNSALTTTAASSSSTNIGSGLSANKPSSF
PPFSSMNSTTSASLPTQAAAVQNGQPGGQQQQATLQAAGISGEASSAPAPPHPEVSESTM
DRDKVGVPTDGDSHAVTYPPAIVIYIIDPFTYERKDENSSSSSVWTLGLLRCFMEMVQIL
PSSIRNIVSVQIVPCQYLLQPVKHEDRQIYTQHLKSLAFSAFTQCRRPLPTSTNVKTLTG
FGPGLAMETALKSPDRPECIRLYTPPFILAPVKDKQTELGETFGEAGQKYNVLFVGYCLS
HDQRWLLASCTDLYGELLETCIINIDVPNRARRKKGSARRLGLQKLWDWCLGLVQMSSLP
WRVVIGRLGRIGHGELKDWSCLLSRRNLQSLSKRLKDMCRMCGISAADSPSFLSACLVAM
EPQGSFIIMPDSVSTGSVFGRSTTLNMQTSQLNTPQDTSCTHILVFPTSASVQVASSTYT
TENLDLAFNTNNDGADGMGIFDLLDTADELDPDIINILPASPTGSPVHSPGSHYPHGGDM
GKGQSTDRLLSTESHDEVTNILQQPLALGYFVSTAKAGPLPDWFWSACPQAQNQCPLFLK
ASLHLHVPSVQSDELLHSKHSHPLDSNQTSDVLRFVLEQYNALSWLTCDPATQDRRSCLP
VHFVVLNQLYNFIMNML
NT seq
6534 nt
NT seq
+upstream
nt +downstream
nt
atgagttcctgcttcgtgccgaacggggccagcctggaggattgccactccaacctcttc
tgcctggctgatttaactggcattaaatggaaacgatacgtatggcagggcccaacatct
gccccaattctctttcccgtaacggaagaagaccccattctgagcagtttcagtcgctgt
ctgaaggctgacgtactgagtgtttggcggcgtgatcagagacctggacgcagagagctg
tggatattttggtggggcgatgaccccaactttgctgacctgattcatcatgatctggca
gaagaggaagatggcgtatgggagaacggactttcctacgaatgtcgcactctgcttttt
aaggcagttcacaacctgttggagcggtgtttaatgaaccggaattttgtgcgcattggg
aaatggttcgtgaagccttacgagaaagatgaaaaacctattaacaaaagtgagcacttg
tcttgctccttcacctttttcttgcatggggacagcaatgtctgcaccagtgtggaaatc
agtcagcatcaacctgtgtacctgcttagcgaggagcacctcactctggcccagcagtca
aacagcccttttcaagttattctaagtccttttggattaaatggcacgctcacaggacag
tcattcaagctgtcggactcatccacaaaaaagcttattggtgaatggaaacagttctat
cctatcacatctaacttgaaggagggctctgaggaaaaacaagaagagatggattgggaa
gatgactctctggctgctgtggaagttctcgttgcgggtgtgcgaatggtctacccagcg
tgctttgtcttagttcctcaaacagatatccctgctcctagtactgttggggcttctcat
tgttcaactacttgcttgggtgtccaccaagtgcctgctaccaccagagatcctgccatg
tcttcagtaactctaactccacctacgtccccagaagaagttcagacagcagttgatgct
cagtctgcccagaagtgggtgaagttttcttccgtttccgatggttttagctctgacagt
actagccaccatggtggcaaaatcccaagaaaactagccaatcaggtggtggatcgagtt
tggcaagaatgcaatatgaacagagcacagaacaagaggaagtattctgctacatcaaat
ggcttatgcgatgaagagacagctgacaaagtagcctcctgggattttgttgaagccaca
cagaggacaaattgcaattgttcaaggcacaaaaatctcaaaccaagaaattcagggcag
caggggcaggcgccgcccgcaagccagcagcagcaagcggctccaaagcacaagacaaat
gagaagcaagacaagggggataagccgcaaaaacgccctttgactcctttccaccatcgt
gtctctattagtgacgatgttgccatggaggcagaatcagcaagtcagaggcttgtgatc
acagcaccagacagtcaagtgagattttcaaatatcagaactaacgatgtagcaaagact
cctcagatgcatggcactgaaatggcaaattcacctcaaccgccaccacttagtcctcac
ccttgtgatgtagtcgatgaaggggtaactaaaactccttctactcctcagagccagcat
ttctatcagatgccaacaccagattccttggttccttcaaaaacaatggaagacaggata
gatggcttgtcccagtctttcccagctcagttcccagaagtcatagagcccacaatatac
attggtactgcagtgaatctggaagaagatgaagctgataacacttggaagtattataaa
gttccaaagaaaaaggatgtggaattcttaccgcccccgctcccctgtgacaaattcaga
gacgatccagtggtacctgctggacaggaaaacctcacatccgttacagaattaatggtg
caatgtaggaagcctttaaaggtttcagatgaactggtgcagcagtatcagagtaaaaat
cagtacctaacagcagtagcatctgaaactgaccaagaacctgaaattgatccatacgca
tttgttgatggtgatgtggaattcctttttcccgataataaaaaagagaggcagaacaat
gaacgggaaactgggaaaaaacacaaggctgaagatgggacatctaatgttacagtttta
tcccatgaaggagaggatgcgatgtcactctttagtccttctgtcaagccagaacaacgt
attgctgctcatgctcgtactgcatcaactagcctaattcatgaaacagacttggtggtc
tcttacaccgaccttgacaatctcttcaactctgatgaagatgaattaacacctggatct
aagagaactgtgaatggctcagatgacaaacccaactgcaaagagtcaaaaacaggaaat
ctggaccccctctcatgcataagtactgcagatcttcataagatgtatccaacaccacca
tctctggaacagcatattatgggtttttccccaatgaatatgaataataaggaatatggc
agcatggacactacacttggaggaactgtacttgaagggaatagctcaagcataggagct
cagttcagaattgaagtagatgagggattctgcagtccaaaaccttctgaaatcaaggat
tattcttatgtttacaagcctgaaaattgtcaggctttggtaggatgttccatgtttgca
ccgctgaagactctccctagccagtgtctccctcctatcaaactgccggaagagtgcgtt
ttccgtcaaagctgggctgttggaaagctggagctacttcctccgggacctgccatgccg
tttatcaaagagggtgatggaagcactatggatcaagagtatggtcctgcctacacccca
cagactcatactccgtttgggatgccgccaagcagtgcccctcccagcaacagcggagca
ggaattctcccttccccatccacccctcggttcccaactcctagaacaccaaggacacct
cgcacccctcgtggaggtggtggacctgccagtgctcaaggttcagtcaaatatgagaat
tcagacttgtattcaccagcttccacaccatcaacatgtcggccccttaattctgtggaa
cctgcaactgtaccttccatccctgaggctcacagtctttatgtgaatctcatcctctcg
gagtcggtaatgaatctcttcaaagactgtaactttgacagttgctgcatctgtgtctgc
aacatgaatatcaaaggtgctgacgttggagtatacattccagatccaacgcaagagatt
cagtataggtgtacgtgtggcttcagtgctgtcatgaatagaaagtttggcaacaactct
gggctgttccttgaagatgaattggatattctagggcgtaatacagaaggcggcaaagaa
gcagagaaacgttttgaagccctccgagctccttcggttgagcatggtggtggtggattg
aaagaacctgagaaattgcccgatgagttaatactgttgctgcaagatcagtgcaccaat
ttgttttcaccgtttggagcagcagatcaagatcccgtacccaaagttggtgcagttagc
aacctagtacgtgtagaagaacgggattgttgcaatgactgctacctagcattggagcat
ggacgccagttcatggacaatatgtcaggaggaaaagttgatgaagcacttgtgaaaagt
acttgcttgcatcactggtcaaaaagaaatgtggtggatgtgagcatgcagtgttcacag
gacatccttcgcatgctcctctcactacagccagttctccaggacgctattcagaaaaag
cgaacagtccgatcttggggtgtgcaaggccctctcacctggcagcagtttcacaaaatg
gctggcagaggctcctatggaactgacgagtccccagaaccactgccaattccaaccttt
ttgctgggatacgattatgactttctggtgctgtctccatttgccttgccatactgggag
aggctgatgttggaaccctatggatctcaaagagatgttgcgtatgttgtggtgtgccct
gaaaatgaagccctgctgaatggagcaaaaagcttctttagggatctgactgcaatttat
gagnnctgtagacttggccagcatagacctatctgtaaactgctgcctgacgggatcatg
agagtaggatccactgcttcaaagaaactttctgagaagttggttgcagaatggttctct
caggcagccaatgccaacaatgaagcattttccaaactcaagctgtatgcacaagtttgc
agatacgagctgggtccttaccttgcctctcagccactagacagttctttgctttcccag
ataaatctagttcccccagcaagccaatctgtatccatacagcctcaagcggcaggtaac
actggaaactccaacactccttcatccacccctgcagctgctaccagtagtaccatgact
tcaaacagtgccatgtcttctgcagctactacaaccaattcagctctgaccactactgct
gcttcatcctcttccaccaacataggcagtgggctatcagcaaacaaaccttcctcgttt
ccaccttttagcagcatgaacagtactacttctgcctccctgccaacacaagctgcagca
gtccagaatgggcagccagggggacaacagcaacaggcaactcttcaagctgctgggata
tctggggaagcttcctctgcccctgcaccgccgcaccccgaagtctcagaaagcactatg
gatcgtgataaagttggagtcccaacagatggagattctcatgctgtcacgtacccacct
gcaatagtaatttatataattgatccttttacgtacgagaggaaagatgagaacagtagc
tcatccagtgtgtggacccttgggctgcttcgttgctttatggagatggttcagattctt
ccttccagcatcaggaatatagtttctgtgcagattgtcccatgtcagtacctgttacaa
cctgtgaagcatgaagataggcaaatctacacccagcatttaaaatccctggcattttcg
gcatttacccagtgccggaggcctcttcccacttcaaccaatgtgaaaactttgaccggt
tttggcccagggttagcaatggaaacggctcttaagagcccagataggccagagtgtatt
cgactctatactcctccttttatactggcccctgtaaaggacaagcaaacagagcttgga
gaaacttttggagaggctggacagaagtataatgtactttttgtgggctactgtttatct
cacgatcaaagatggcttcttgcatcatgtacagatctctacggagaactgttagaaact
tgcataattaatattgatgtaccaaacagagcgcgcaggaaaaaaggctctgcccgccga
cttggtctccagaagctctgggactggtgcttgggacttgtacaaatgagctctttgccc
tggagggttgtgataggtcgtctgggaaggatcggtcatggagaactaaaagattggagc
tgtttgctgagtcgccgaaacctccagtccctcagcaagagactaaaagacatgtgtagg
atgtgtgggatatctgctgcagactctcccagctttctcagtgcttgcttggttgcaatg
gaaccacaggggtcttttattattatgccagattccgtatcaacagggtctgtgtttggg
cgcagcaccactctaaatatgcagacatctcagctgaataccccacaggacacgtcatgc
actcacatactggtgtttcctacatccgcttctgtgcaagtagcatcgtcgacctatacc
actgaaaatttggatctggccttcaatacaaacaatgatggagcagatggaatgggtatc
tttgatttgttagacactgcagatgaacttgatcctgatattattaatatccttcctgca
tcccccactgggtcccctgtacattcaccaggatcccattaccctcatggaggtgatatg
ggcaagggtcaaagtacggatcgattgctttccacggaatctcacgacgaagtaacaaat
attctacaacaaccattggcccttggttactttgtgtcaactgccaaagcaggtccattg
cctgactggttttggtcagcatgtcctcaagcacaaaatcagtgtcccttgtttcttaag
gcctctctgcacctccatgtgccttcagtgcaatctgacgagctactccacagtaaacac
tcccacccgcttgattctaatcaaacttctgatgtcctcaggtttgttttggaacagtac
aatgcactctcctggctaacctgtgatcctgcaacccaggacagacggtcgtgtctccca
gttcattttgtggtgctgaatcaattgtataactttatcatgaatatgctgtga
DBGET
integrated database retrieval system
