Gavialis gangeticus (Gharial): 109293309
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Entry
109293309 CDS
T07453
Name
(RefSeq) LOW QUALITY PROTEIN: pinopsin-like
KO
K04251
long/medium wavelength-sensitive opsin
Organism
ggn
Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ggn04030
]
109293309
G protein-coupled receptors [BR:
ggn04030
]
Rhodopsin family
Vision
Opsin
109293309
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7TM_GPCR_Srw
Motif
Other DBs
NCBI-GeneID:
109293309
NCBI-ProteinID:
XP_019366705
LinkDB
All DBs
Position
Unknown
AA seq
309 aa
AA seq
DB search
MYAFNTSGAAKLNGTPGPFDGPQWPHLVPRSIYMSVAVFMGMVVISASFVNGLVIMVSVR
YKKLRTPLNYILVNLAVANLLVTLFGSTVGFSSNINGFFMLGKKFSEFEGFLVSLTGIMG
LWSLAILAFERYIMICKPIGDFRFQQKHALMGCAFTWIWSLLWTVPPILGWSSYVPEGLR
TSCGPNWXAGSSNNNSYIMALFVTCFVLPLSMIFFSYTNLLVMLRAVAAQQKGSTTTQQT
ERKVTQMVTAMVLAFLTSWLPYATFAMVVATNKDIPIQPALASLPSYFSKTATVYNPVIY
VFMNKQVRH
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgtacgcctttaacacctccggggctgccaagctaaatggtaccccaggcccctttgat
ggtccccagtggccccacctggtgcccagaagcatctacatgtcagtcgctgtgtttatg
ggcatggtggtgatttctgcctcctttgtgaatgggctagttataatggtttccgtaagg
tacaagaagctcaggactcctctgaactacatcctagtgaacctggcggtggccaacctc
ctagtgacactgtttggaagcactgtcggcttctccagcaacatcaatggcttcttcatg
cttggcaaaaagtttagcgagttcgaaggcttcctggtctccttaacaggtatcatgggg
ctctggtccctggcaatcctggcctttgaaagatatatcatgatttgcaaacccattgga
gatttcagatttcagcaaaaacatgcactgatgggctgtgccttcacttggatttggtca
cttctctggacagtcccaccaatccttggctggagcagctacgtacctgaaggtctgaga
acctcctgcggtcccaactggtaggctggcagcagcaacaacaatagctacatcatggcc
ttgtttgttacctgctttgtgctgcctctcagtatgatcttcttctcctacaccaatctg
ctggtgatgctacgagccgttgcagcacaacagaaaggatctacaacaactcagcaaaca
gagcggaaggtgacgcagatggtgactgctatggtgctggcctttctcaccagctggctg
ccctatgccacctttgctatggtggttgccacaaacaaagacatccccatccagccagct
ttagcatcgctcccttcctacttctccaaaacagccacagtttacaatccagtcatctat
gtcttcatgaacaagcaggtgagacactga
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