Gavialis gangeticus (Gharial): 109293335
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Entry
109293335 CDS
T07453
Symbol
SMARCD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109293335 (SMARCD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ggn03021
]
109293335 (SMARCD1)
03036 Chromosome and associated proteins [BR:
ggn03036
]
109293335 (SMARCD1)
Transcription machinery [BR:
ggn03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
109293335 (SMARCD1)
Chromosome and associated proteins [BR:
ggn03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
109293335 (SMARCD1)
PBAF complex
109293335 (SMARCD1)
GBAF(ncBAF) complex
109293335 (SMARCD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
DivIC
Motif
Other DBs
NCBI-GeneID:
109293335
NCBI-ProteinID:
XP_019366739
LinkDB
All DBs
Position
Unknown
AA seq
425 aa
AA seq
DB search
MAQAGLDQSRKRPAPQQIQQVQQQAVQNRNHNAKKKKMADKILPQRIRELVPESQAYMDL
LAFERKLDQTIMRKRLDIQEALKRPIKQKRKLRIFISNTFNPAKSDAEDGEGTVASWELR
VEGRLLEDSALSKYDATKQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTATTQETDGF
QVKRPGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQD
PHEREYVICDKYLQQIFESQRMKFSEIPQRLHALLMPPEPIIINHVISVDPNDQKKTACY
DIDVEVDDTLKTQMNSFLLSTASQQEIAALDNKIHETIETINQLKTQREFMLSFARDPQG
FINDWLQSQCRDLKTMTDVVGNPEEERRAEFYFQPWAQEAVCRYFYSKVQQRRQELEQAL
GIRNT
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggcccaggccggcctggaccagtcgcgcaagcggccggcgccacagcagatccagcag
gtgcagcagcaggccgtgcagaaccgcaaccacaacgctaagaagaagaaaatggctgac
aaaattctacctcagaggattcgtgagctggtacccgaatctcaggcctacatggatctg
ctggcatttgaaaggaaactggaccagacgatcatgaggaaacggttggatatccaggag
gccttgaaacggcccattaagcaaaaacgaaagcttcgcatcttcatttccaacactttc
aatccggccaagtcggatgcagaggatggtgaggggactgttgcctcatgggagctcagg
gtggaaggacgtctgctagaggattcagctctgtccaaatatgatgccaccaaacagaaa
aggaagttttcatccttctttaagtctctggtcatcgagctggataaagacctgtatggc
ccagacaatcacttggtggagtggcacaggactgctactacccaggagacggatggcttc
caggtgaagaggcctggtgatgtgaatgtgcgctgcactgtcctcctgatgctggactac
cagcctccacagttcaagctggacccccgcctggctcgtctcttggggatacacacccag
acccgcccagtgatcattcaggcactgtggcagtatatcaagacccacaaactgcaggac
ccccatgaacgggagtatgtcatctgtgacaagtacctccagcagatatttgagtctcaa
cgaatgaagttctcagagatcccccaaaggctgcatgctttgcttatgcctccagagcca
attatcattaaccatgtgatcagcgttgatccaaatgaccagaagaaaacagcctgctat
gacattgatgtggaagtggacgataccctaaaaacccagatgaattccttcctgctctcc
acagccagtcaacaggaaatcgctgctctggataacaagatccatgaaacaatagaaacc
attaaccagctgaagacccagcgggagttcatgctcagctttgcccgggacccccaaggc
ttcatcaatgactggcttcagtcacaatgccgggatctaaagaccatgaccgatgttgtt
ggaaatccagaagaggagcgtagagctgagttctacttccagccgtgggctcaggaagct
gtgtgcagatacttctactccaaggtgcagcagagacggcaggagctggagcaggcccta
ggaatccgtaacacatag
DBGET
integrated database retrieval system
