Gavialis gangeticus (Gharial): 109293346
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Entry
109293346 CDS
T07453
Symbol
NCOR1
Name
(RefSeq) nuclear receptor corepressor 1 isoform X1
KO
K04650
nuclear receptor co-repressor 1
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
109293346 (NCOR1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ggn01009
]
109293346 (NCOR1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ggn03036
]
109293346 (NCOR1)
Protein phosphatases and associated proteins [BR:
ggn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
109293346 (NCOR1)
Chromosome and associated proteins [BR:
ggn03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
109293346 (NCOR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
109293346
NCBI-ProteinID:
XP_019366753
LinkDB
All DBs
Position
Unknown
AA seq
2537 aa
AA seq
DB search
MSSSGYPPNQGAFSTEQSRYPTHSVQYTFPSTRHQQEFAVPDYRSSHLEVSQATQLLQQQ
QQQQQLRRRPSLLSEFHPGSDRPQERRTGYEQQFHPGPSQTDHDSLDTKRPRLEQVSDSH
FQRVSTAAVLPLVHPLQEGLRSSDIKKEPAFGGKHEGPSSPIPGQPCGEDQNASPSKLSK
EELIQSMDRVDREIAKVEQQILKLKKKQQQLEEEAAKPPEPERPVSPPPVEQKHRSIVQI
IYDENRKKAEEAHKIFEGLGPKVELPLYNQPSDTKVYHENIKTNQVMRKKLILFFKRRNH
ARKQREQKICQRYDQLMEAWEKKVDRIENNPRRKAKESKTREYYEKQFPEIRKQREQQER
FQRVGQRGAGLSATIARSEHEISEIIDGLSEQENNEKQMRQLSVIPPMMFDAEQRRVKFI
NMNGLMEDPMKVYKDRQFMNVWTDHEKEIFKEKFVQHPKNFGLIASYLERKNVPDCVLYY
YLTKKNENYKALVRRNYGKRRGRNQQQIARPSQEEKVEEKVEEEKAEKTEKREEEKKDEE
EKDEKEESKENTKEKDKTEVAPEETEEREQATPRGRKTANSQGRRKGRITRSMTNEAAAA
NAAAAAATEEPPPPLPPPPEPSSAEPVETSRWTEEEMEVAKKGLVEHGRNWAAIAKMVGT
KSEAQCKNFYFNYKRRHNLDNLLQQHKQKSSRRPREERDVSQCESVASTVSAQEDEDIEA
SNEEENPEDSEGAENSSDTESAPSPLPAEAVKPSEDAVSEGTVSRITTETAAEQESAIKT
APSASPSAAAQCTQTAETQNSEPQVKEEINNEVGEPMEVDNRSHSAEVKPMLNLPVHTKA
EPVDTEMRLPENIQVKIESETKERDMEKPKEKSEPEEMDFSLTQQSATARQETHSDNDSS
ATCSADEDVDGEPERQRIFTMDSKPSLLNPTGSILVSSTIKQGQMDLQQLHHRAAVIPPM
VSCSPCTVPVGTPVSGYALYQRHIKAMHESALLEEQRQRQEQLDMEYRSSASPCGTSKSP
SMEWEGKSVAYMPYAEVKRAIEQEAQVQNTAARSASPYRLSPREVNKASPQPDMNAARYS
VPPVLQPAPHQVITNIPEGVRLSTTRPTRPPPPLIPSSKTSVPSEKPSFIMGGSISQGTP
GTYLTSHSQASYGQEPAKPSVGSISLGLPRQQESAKPAAIPYIKQEEFSPRGQNSQPEGL
LVRAQHEGVVRGTTTTIQEGSITRGTPTNKVSVETMPSLRGSITQGTPALSQSGIAADAL
LKGTITRLATEDSSPEKCRDESTAKGHVIYEGKSGHILSYDTAIKNVREGTRSPRTAHEM
GLKRSYDTMEGNIKQGMPMRESPVSAPLEGLICRALPRGSPHAELKERTVLSGSIMQGTP
RTTAESFEDGLKYPKQIKRESPPIRTFEGAITKGKPYDGVTTIKEMGRSIHEIPRQDLLS
QESRKTPEIVQTARPIIEGSISQGTPIKYESNSGQSAIKHNVKSLITGPSKLPRGMPQLE
MMPENMKVVERGKYEDVKNADAVRTRHTSVVSSGPSVLRSTLHEAPKSQLSPGIYDDTNA
RRTPVNYQSSMSRSSPMMNRVTEAGMSSGKSTNHERKTPLTPTQRESVPAKSPVPGVDPV
VAHSPFDPHHRGATTEGYRSHLPPHLDPAMPFHRALDPAAAAYLFQRQLSPTPGYPSQYQ
LYAMENTRQTILNDYITSQQMQVNLRPDVTRGLSPREQTLALPYAGARGIIDLNNMAPTI
LVPHPGGTSTPPMERITYIPGTQLTFPPRPYNPASLSPGHPTHLAASAAANAERERERER
EKEREREREREREQERQRERERERIAAVPSELYLRPGTEQPGRPGSHGYVRSPSPSVRTQ
ENILQQRPSIFQGTNGTSVITPLDPAAQLRIMQLTPGAPTITPGLPASRYNTAADALAAL
VDAAASAPQMEVAKAKENKHEGGRIEENMGRRSAVVTEQQPQVEQEVLDMEKRPVQCPYT
SAAFSSGKSQGQSSSSVVYSEAGKEKGHSKSRYEEELRTRGKTTITAANFIDVIITRQIA
SDKDARDRGSQSSDSSSSLSSHRYEPPGDAIEVITPASSPAPAQEKLQPYQQEVPKPNQA
ENDPNRQYEGSIHRYRAQQESPSPQQPPPPSSQAEGMAHVPKTHRLITLNDHICQIITQN
FARNQSASQTSLQPPTSTFQNSAPVASPTPLRAKAPNRYSPELQSQSVHYQRSAARVSPE
NLSDKGRGRPGKSPERSHVSSESYEPISPPQVPVVHEKQDNVLLLSQRSEPTEQRTDSRS
PGSISYLPSFFTKLESTSPMVKSKKQEIFRKLNSSGGGDSDMAAAQPGTEIFNLPAVTTS
GAVSSRGHSFADPASNLGLEDIIRKALMGNFDDKGEDHGVVMSQPIGVAPGSSNPAVSAN
SETRREEANPSPNSGVGVGKQKLIGKSSSRKSKSPIPGQGYLGTERPSSVSSVHSEGDYH
RQTPVWAWEDRPSSTGSTQFPYNPLTMRMLSSTPPTSIACAPPSMSQATTHQQNRIWERE
PAPLLSAQYETLSDSDD
NT seq
7614 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagttcgggctatcctcctaaccaaggagcattcagcacagaacagagtcgttac
cctacgcactctgtccagtacaccttccctagcacccgacatcagcaggagtttgcagtt
cctgattatcgttcttctcatctggaagtcagtcaggcaactcagcttttgcaacagcaa
cagcagcagcagcagcttcggcgacggccttccttgctttcagaatttcacccgggctct
gacaggcctcaagaaaggagaactggatatgagcagcagtttcatccaggtccatcacag
acagatcatgattctttggacactaagcgtccacgtcttgaacaagtttctgattcccat
tttcagcgtgtcagtactgctgctgtcctacctttagtacatcctctgcaggagggattg
cgctcttcagatattaagaaggaaccagcttttggaggcaagcatgaagggccatcctct
cccattcctggtcagccatgtggagaggaccagaatgcttcaccttcaaaactgtcgaag
gaagagcttatacagagcatggatcgtgtagatcgagaaattgcaaaggtggaacagcag
atccttaaactgaagaagaagcaacaacaacttgaagaagaagctgctaagcctccagag
ccagagaggcctgtctcccctcctccagtggaacagaaacaccgcagtattgtccaaatt
atttacgatgaaaatcggaaaaaagcagaagaagctcacaagatttttgaaggtcttggt
ccaaaagttgaactaccactttacaaccagccgtcagacacaaaggtgtaccatgaaaac
atcaaaacaaaccaggtgatgaggaagaagctaattttattttttaagagaagaaatcat
gcaaggaaacaaagggaacagaagatttgtcaacgttatgatcaattgatggaggcatgg
gagaaaaaagttgacaggatagaaaataatcctcgtaggaaagctaaagagagtaaaaca
agagagtactatgagaaacagttcccagaaatccgaaaacagagagagcagcaagaacga
tttcaaagggttggtcaaagaggggctggtctttcagcaaccattgctagaagtgaacat
gagatttctgaaatcattgatggactctctgagcaggagaacaatgaaaaacaaatgcgt
cagctctctgtcattcctcccatgatgtttgatgcagaacaaagacgagtgaagtttatt
aatatgaatggtttgatggaggatcccatgaaggtttataaagatagacagttcatgaat
gtttggacagaccatgagaaggagatcttcaaggaaaagtttgtccaacatcccaagaac
tttggtctaattgcttcctacctggaaagaaagaatgttcctgactgtgtgctatattat
tatctaaccaagaaaaatgagaattataaagcgcttgtgcgaagaaattatggaaaacgt
agaggaagaaaccagcaacaaattgcacgtccttcccaagaagaaaaggtagaagaaaaa
gtagaagaagagaaagcagaaaaaacagagaaaagagaggaagaaaagaaagatgaagag
gaaaaggatgagaaggaggaatctaaagagaacaccaaagagaaggacaaaacagaagtt
gccccagaggaaactgaggaaagggagcaagcaactcctaggggacgaaagactgccaac
agccaaggccgccgtaagggcaggatcaccagatcaatgacaaacgaagctgcggccgca
aatgctgctgcagctgctgctactgaagaaccaccgcctcctctcccacccccgccagaa
ccttcttctgcagagcctgtggagacctcccgctggacagaagaagaaatggaagttgct
aaaaaaggattagtggaacatggtcgcaattgggcagcaattgccaaaatggttggaact
aaaagtgaagctcagtgtaaaaacttctacttcaactacaaaaggagacataatctggac
aacctccttcagcagcacaagcagaaatcttcacgacggccccgtgaagaacgggatgta
tctcagtgtgaaagtgtggcatcaactgtgtcagctcaggaggatgaagatattgaagcg
tccaatgaagaagaaaatccagaagacagtgaaggtgccgaaaacagctcagatacagag
agcgctccatctcctttaccagcagaagctgttaaacctagtgaagatgctgtgtctgag
ggcactgtttctagaataaccactgagacggcagcagagcaggaatctgccattaaaact
gcacccagtgcctccccttctgcagcagcccagtgcacgcaaacagctgaaactcagaac
tctgagccccaggttaaagaagaaataaataatgaggtgggagagcctatggaggtggac
aatagaagccactcagctgaagttaaacctatgcttaaccttccagtgcataccaaagca
gagcctgtagacactgaaatgaggttaccagaaaatattcaagtgaaaatagaaagtgaa
accaaagaaagggatatggagaaacccaaggaaaagtcagaacctgaggaaatggacttc
agtctcacacaacagtctgctacagcaagacaggaaacccattcagacaacgattcgagc
gccacgtgtagtgccgatgaggatgttgatggagaacctgaaagacaaaggatcttcact
atggactcaaagccttcactgctaaacccaactggatcaatactagtatcatccacaata
aaacaaggacagatggacttgcaacaacttcaccatcgagctgctgtcatacctcctatg
gtctcttgtagcccatgtactgtacctgttggcacaccagtgagcggttatgctctctac
cagcggcacattaaagctatgcatgagtcagcgttgctggaagagcagcgccaaaggcaa
gagcagctagatatggaatacagaagttctgcgagcccgtgtggtacatccaagagcccc
agcatggagtgggaaggaaaatcagttgcctatatgccttatgctgaggtcaaacgagca
atagagcaggaagcacaggtgcaaaatacagcagcaaggtcagcatcaccgtacaggcta
tctccaagagaagtcaataaagcctctcctcagcctgatatgaatgccgctcgctatagt
gtcccaccagtcctccagcctgctcctcatcaagtaatcacaaatataccagaaggggtc
cggctctcaacaacccgacctaccagaccaccaccgccactcattccatcctccaaaact
tctgtgccatcagaaaagccatcgttcattatgggaggttcaatctcacaaggaacacct
ggcacttacttaacatcccatagtcaagcttcttatggtcaagaaccagcaaagccctct
gtgggttccatatctcttggactgccaaggcaacaggagtctgccaaacctgctgccata
ccctatatcaagcaagaagagttctctcccagaggccagaattcccagcctgagggtctt
ttggtcagggcacagcatgaaggcgtggtcagaggtaccacaacaaccatacaagaagga
agtataacacgaggaactccaaccaacaaggtttctgtcgaaactatgccttcgctgcga
ggatccattactcagggtaccccagctctgtctcaatctggcattgctgctgatgcatta
ctgaaaggaaccatcactcgactggctaccgaagacagcagccctgagaagtgccgagat
gagtctacagccaaaggccatgttatttatgaaggcaagagtgggcatatcttatcctat
gatacagctattaagaatgtccgagaaggaacaaggagtccacggactgctcatgaaatg
ggtttaaagcgaagttatgatactatggaaggaaatataaagcaaggaatgcccatgagg
gagtctccagtctctgcaccattagaagggttaatatgccgtgcactgcccaggggcagc
cctcatgctgaactgaaagaaagaactgtgctgtctggctctataatgcaaggcacaccc
agaacgacggcggagagctttgaagacggtctgaagtatcccaagcagattaagagagaa
tctccacccataaggacatttgaaggagccattaccaagggaaagccctatgatggagtc
actaccattaaagaaatgggccgttctatccacgaaatccccaggcaggacctactgagc
caagaaagtcgcaagactccagaaatagtgcagactgcaaggcccattatagaaggctcc
atttctcagggtacacctataaaatatgaaagtaactctggccagtctgccatcaaacac
aacgttaaatctttaatcactggaccaagtaaactaccccgcggaatgcctcagctggaa
atgatgccagaaaacatgaaagtggttgaacgaggaaaatatgaagatgtgaagaatgcg
gatgctgtacgtacccgccatacatcagtggtcagttctggtccctctgttctcaggtca
actcttcatgaagctcccaaatcacagctgagccctgggatttatgatgataccaatgca
agaaggacacctgtgaactatcagagctctatgtccaggagttccccaatgatgaacaga
gttactgaagctggaatgtcttctgggaagtctacaaatcatgaaaggaaaacaccgctc
actccaactcagagagagagtgtaccagcaaaatcaccagtcccaggggtcgacccagta
gtagctcacagtccctttgacccccatcatagaggagctactacagaaggctacagaagc
catcttccccctcatttggatccagccatgccatttcacagggctctggatcctgctgca
gctgcatacctgtttcagaggcagctttcacccaccccaggttacccaagtcagtaccag
ctttatgcgatggagaacacacggcagacaatcctaaatgactatattacctcacagcag
atgcaggttaacttacgccctgatgtaacccgaggattatctcctagagagcaaacgtta
gctctcccatatgcaggagccagaggaattattgacctgaataatatggctcccactatc
ttagtgccacacccaggaggaacaagcacccctcctatggagaggatcacttatatccct
ggcacccagcttacgttccctcccaggccttacaatcctgcctctctgtcaccaggacac
cctacacatctggccgcttcagctgcagcaaatgctgaaagggaacgggagagagagagg
gagaaggaacgagagagggagagagaacgtgaacgagagcaggaaaggcagcgagagcga
gaaagggagagaatagctgctgttcccagtgaactctaccttcggcctggtacagagcag
cctggtagacctggcagtcatgggtacgttcgctcaccttctccttcagtgagaacgcaa
gagaacatactgcagcaaaggcccagtattttccaaggaaccaacgggacaagtgtgatc
acacctctggaccctgctgcccagctacgtatcatgcagctcacccctggagcccccacc
atcactccaggcttgcctgcttcccggtacaacacggcagctgatgccctggctgcactt
gtagatgctgcagcctctgctcctcagatggaagttgccaaagcaaaagagaacaagcat
gaaggaggcagaatagaagagaacatggggcgcaggtcagccgtggttactgagcagcag
ccacaggtggagcaggaagtgctggacatggaaaagagacctgttcagtgtccctataca
tcagcagccttttccagtggcaagtcccagggtcagtcttcgtcctcagtagtgtattca
gaggctggtaaagagaaggggcattctaaatccaggtacgaggaggagttacgaacccga
gggaagaccaccattactgctgcgaacttcatcgatgtgatcatcactcggcagattgct
tcagacaaggatgcacgggatcggggctcgcagagttcagattcttctagcagtttatcc
tcccaccggtatgagccacctggagatgccattgaggtgatcactcctgcaagttcgcca
gcgcctgcacaagaaaaactgcagccctatcaacaagaggtgcccaaaccaaaccaggca
gagaatgatcccaacagacagtatgaggggtcgattcatcggtacagggcacaacaagaa
tctccatctccccagcagcctccaccaccttcctcacaggcagaagggatggcacatgtg
cccaagacccatcgtctgatcacccttaatgaccatatctgtcaaatcattacacaaaat
tttgctcgaaaccagtcggcctcccagacctccctgcagcctcccacaagtacattccag
aactcagctcctgttgcaagtcccacgccccttcgggccaaggcacccaaccgctacagt
cccgagttgcagtcacagtctgtccactaccaacggtctgctgctagggtatctcctgag
aatctctccgacaaaggcaggggaagacctgggaagtctccagaaagaagtcatgtctct
tcagagtcctacgagcccatctcaccccctcaggtcccagttgtgcatgagaaacaagac
aatgttctgctgctttcccaaagatccgagcctactgaacagaggactgactctcgctct
cctgggagtataagctacttgccttcgtttttcaccaagcttgaaagcacatcaccaatg
gtgaagtccaagaagcaggagatatttcgtaagttgaactcctctggtggaggtgactct
gacatggcagctgctcagccaggaactgaaatattcaatttgccagcagtcactacctca
ggtgcggtcagttctaggggtcattcctttgcagatcctgccagtaatctgggtctggaa
gacattattaggaaggcattgatgggaaactttgatgacaaaggggaggatcatggagtt
gtaatgtcacaacctataggggtagcacctggcagttccaaccctgcagtatcagcaaac
agtgagacccgtagagaagaagctaatccatcgcccaattcaggagtgggagtcggcaag
cagaagttaatcggcaagtccagtagcaggaagtctaaatctcctattcctgggcagggc
tatttaggaactgagagaccttcgtctgtctcatctgtacattcagaaggagattaccat
agacaaactccagtgtgggcctgggaggacaggccttcatcaacaggatccacgcagttc
ccttacaaccccctgacgatgcggatgctcagcagtacaccgccaacatccatcgcatgt
gctccaccatccatgagccaagcaaccactcaccaacagaacaggatctgggagcgagag
cctgccccactgctttcagcacaatacgagactctgtctgacagcgacgactga
DBGET
integrated database retrieval system
