KEGG   Gavialis gangeticus (Gharial): 109293389
Entry
109293389         CDS       T07453                                 
Symbol
HIC1
Name
(RefSeq) LOW QUALITY PROTEIN: hypermethylated in cancer 1 protein
  KO
K24384  hypermethylated in cancer protein
Organism
ggn  Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:ggn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ggn03000]
    109293389 (HIC1)
Transcription factors [BR:ggn03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 BTB-ZF factors
    109293389 (HIC1)
SSDB
Motif
Pfam: zf-H2C2_2 zf-C2H2 zf-C2H2_4 zf-C2H2_jaz zf-C2H2_6 BTB zf-met zf-C2H2_15 Zf-C2H2_ZNF451_2nd zf-C2H2_3rep zf-C2H2_2 zf-C2H2_11 Zf-C2H2_ZNF451 zf-C2H2_16 zf-Di19 zf-UBP TRASH_HVO_1752_C NPB13-l_MII_rpt LIM DZR_2 zf-LYAR zf-BED
Other DBs
NCBI-GeneID: 109293389
NCBI-ProteinID: XP_019366826
LinkDB
Position
Unknown
AA seq 458 aa
MLDAMEVPSHARQLLLQLNTQRTKGFLCDVIIVVQNALFRAHKNILAASSAYLKALVVHX
XXXPRHDSPPGSAALLAAHGTAYQEPSPGGDPPDHFRGSPPSAEPPGRAEGRELLYRWMK
HEPLSSYLDECEADKEAEREDKGEGSPTPAPTRYASVESHDLEPDPSTSEETGSSEGPSP
TDPLDRYCGHLAYEPESLGDNLYVCIPCGKGFPSSEQLNAHVEAHTEEELYHKAGAEPPG
PFLDKSSPGLGDILRPYRCASCDKAYKDPATLRQHEKTHWLTRPYPCTICGKKFTQRGTM
TRHMRSHLGLKPFACDACGMRFPRQYRLTEHMRIHSGEKPYECQVCGGKFAQQRNLISHM
KMHTAGPDGKPKLELPDSLYAMARLPPDQLGLQPDKVAELLSHTHFLSDPKAMESLYPLA
KFTAEHLGLSQDKAAEVLGQAPHLHLDAARTIDRYSPT
NT seq 1377 nt   +upstreamnt  +downstreamnt
atgctggacgccatggaggtgccgagccacgcgaggcagctgctgctgcagctcaacacg
cagcgcaccaagggcttcctgtgcgacgtgatcatcgtggtgcagaacgcgctgttccgc
gcgcacaagaacatcctggcggccagcagcgcctacctcaaggcgctggtggtgcacgnn
nnnnnnnngccccggcacgacagccccccgggcagcgccgccctcctggctgcccacggc
actgcctaccaggagccctcgccaggtggcgacccccccgaccacttccgcggcagcccg
cccagcgccgagccccccgggcgggccgagggccgggagctgctctaccgctggatgaag
cacgagcctctgagcagctacctggatgagtgcgaggccgacaaggaggccgagcgggag
gacaagggcgagggctcgccgacgcctgccccgacccgctacgccagcgtggagagccac
gacttggagcctgatcccagcaccagcgaggagacgggcagcagtgaaggcccctctccc
accgacccgctggaccgctactgtggccacctggcctacgagcccgagagcctgggcgac
aacctgtatgtgtgcatcccctgtggcaagggcttccccagctcggagcagctcaatgcc
cacgtggaggcccacaccgaggaggagctgtaccacaaggcgggggccgagccgcccggg
cccttcctggacaagagcagccctggcctgggcgacatcctgcggccctaccgctgcgcc
tcctgtgacaaggcctacaaggacccggccacgctgcggcagcacgagaagacccactgg
ctgacgcgcccctacccctgcaccatctgcggcaagaaattcacgcagcgcggcaccatg
acacgccacatgcgcagccacctgggcctcaagcccttcgcctgcgatgcctgcggcatg
cgcttcccccgccagtaccgcctcactgagcacatgcgcatccactcgggcgagaaaccc
tacgagtgccaggtgtgcggcgggaagttcgcgcagcaacgcaacctcatcagccacatg
aagatgcacacggccgggcccgacggcaagcccaagctggagctgcccgacagcctctat
gccatggcccgcctgccgcccgaccagctgggcctgcagccggacaaggtggcggagctg
ctctcccacacccacttcctcagcgaccccaaggccatggagagcctctatccactggcc
aagtttacggccgagcacctggggctgagccaggacaaggcggctgaggtgctgggccag
gccccgcaccttcacctggatgctgcccggaccatagatcgctactcgcccacctag

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