Gavialis gangeticus (Gharial): 109293394
Help
Entry
109293394 CDS
T07453
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn03030
DNA replication
ggn03420
Nucleotide excision repair
ggn03430
Mismatch repair
ggn03440
Homologous recombination
ggn03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
109293394 (RPA1)
03420 Nucleotide excision repair
109293394 (RPA1)
03430 Mismatch repair
109293394 (RPA1)
03440 Homologous recombination
109293394 (RPA1)
03460 Fanconi anemia pathway
109293394 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ggn03000
]
109293394 (RPA1)
03032 DNA replication proteins [BR:
ggn03032
]
109293394 (RPA1)
03400 DNA repair and recombination proteins [BR:
ggn03400
]
109293394 (RPA1)
Transcription factors [BR:
ggn03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
109293394 (RPA1)
DNA replication proteins [BR:
ggn03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
109293394 (RPA1)
DNA repair and recombination proteins [BR:
ggn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
109293394 (RPA1)
MMR (mismatch excision repair)
109293394 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
109293394 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
CATSPERD-E_C
Motif
Other DBs
NCBI-GeneID:
109293394
NCBI-ProteinID:
XP_019366832
LinkDB
All DBs
Position
Unknown
AA seq
615 aa
AA seq
DB search
MAARLSAGAIAAIMQGESITKPVLQVINTRAIATGSGPPRYRLLMSDGVNTLSSFMLATQ
LNSLVEEERLSAHCVCQVNRFIVNSLKDGRRVVILMELEVLQTADVVRGNIGDPVPYNEG
QGQQQQRSSASAANTAPSKPQQQNGSSAAGGPTVKYYGPSKESGKLAGTSLFNTPGGSQS
KVVPIASLNPYQSKWTICARVIQKSQIRTWSNSRGEGKLFSVELVDQSGEIRATAFNDQV
DKFFPIIELNKVYFFTKGHLKTANKQFSAVKNDYEITFNSETSVLPCEDSQHLPSVQFDF
VPISELENTSKDSIVDVIGICKSYDDITKITVKSTNREVSKRNVYLIDTSGKMVTTTLWG
DEAERFDGSRQPVMAIRGARVSDFGGRSLSVLSSSTLVMNPDSPEAFKLRGWFDSEGQAL
ECTSISDLRGGSTGGGSAIWKTLYESKSENLGQGDKADYFSCVATVVQLRKENCMYQACP
AQDCNKKVIDQQNGLYRCEKCNREFPNFKYRMILFVIIADCLETQWVTCFQESAEVILGQ
NTAFLGELKEKNEQAFDEVLQNALFNTFEFKIRVKLETYNDESRIKATAIDVKPVSYKEH
CKRLITSIRKNAQQG
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcgtctgagtgcgggcgctatcgcggccatcatgcagggggagtccattacc
aagccagtgctgcaagtcatcaacacacgtgctattgctacgggcagcggccctccgcgc
taccgcttgctgatgagcgatggggtgaacacgctctcgtctttcatgttggcaacacag
ctaaactctctagttgaagaggagcgcttgtctgcccactgtgtttgccaggtgaacagg
ttcattgttaacagcctgaaagatggaaggagagtggttatattgatggagttagaggtt
ctgcaaactgctgatgtggttcgtggaaatattggtgatccagtgccatacaatgaaggt
cagggacagcaacagcagcgttcctcggcttcagcagccaacacagcacccagcaaacca
caacagcagaatgggagctcagcagcaggaggtcctactgttaagtactatggaccttca
aaggagtctggtaaattggctggtaccagcttatttaatacgcctggtggatcacagtcc
aaggtggtaccaattgccagtctgaacccataccaatccaagtggaccatatgtgctcga
gtcatccaaaaaagccagatccgcacctggagcaattcccgtggtgaaggaaagctgttc
tccgtagagctagttgatcaaagtggtgagattcgagctactgcattcaatgatcaagtg
gacaagttctttcccatcattgaattgaacaaggtgtatttcttcaccaaaggacatttg
aagacagctaacaagcagttttcagctgtgaagaatgactatgagattacattcaatagt
gagacttcggttttgccctgtgaggattcccaacatcttccctctgttcagttcgatttt
gtaccaatctctgagttagagaacacgagcaaagactcaattgtagatgtaattggaatc
tgtaagagctatgatgatatcactaaaattacagtgaaatctaccaatagggaggtgtct
aagaggaatgtgtatttgatagatacatctggaaagatggtgacgacaactctatgggga
gatgaggctgaaagatttgatggttctaggcaacctgtcatggcgatcagaggagccaga
gtctctgattttggtggccggagtctctctgtcctgagctcaagcacgcttgtgatgaac
ccggatagtccagaggctttcaaactccgaggatggtttgactccgaagggcaggctttg
gaatgtacttcaatctctgatctgagaggtggatcaacaggtggaggaagtgccatttgg
aaaactctgtatgaatctaaatctgagaacttagggcaaggagataaggcggattacttt
agctgtgtggccacagtggtacaactgcgcaaagagaactgcatgtaccaggcttgccca
gctcaagattgcaataagaaagtgatagaccaacagaatggactgtaccgctgtgaaaaa
tgtaatcgcgagttccccaacttcaagtatcgcatgatcctctttgtgatcattgcagac
tgtctggagactcagtgggtgacttgtttccaggagtcagcagaagtcattcttgggcaa
aacactgctttccttggagagctaaaagaaaagaatgagcaggcatttgatgaagtgctc
caaaatgccctcttcaacacatttgagttcaagattcgagtcaagctggagacttacaat
gacgagtcccggattaaagctaccgcgatagacgtgaagcctgtgagctacaaagaacac
tgcaagaggttgatcacgagcatcagaaaaaatgcgcagcaaggatga
DBGET
integrated database retrieval system
