Gavialis gangeticus (Gharial): 109293690
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Entry
109293690 CDS
T07453
Symbol
UBE4B
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn04120
Ubiquitin mediated proteolysis
ggn04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109293690 (UBE4B)
04120 Ubiquitin mediated proteolysis
109293690 (UBE4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ggn04121
]
109293690 (UBE4B)
Enzymes [BR:
ggn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109293690 (UBE4B)
Ubiquitin system [BR:
ggn04121
]
Ubiquitin ligases (E3)
U-box type E3
109293690 (UBE4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
109293690
NCBI-ProteinID:
XP_019367305
LinkDB
All DBs
Position
Unknown
AA seq
1173 aa
AA seq
DB search
MEELSADEIRRRRLARLAGGPSSQPTTPLTSPQRENPPGPPVAAPAPGPSHNLGLNVHSM
TPATSPIGASGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDSVSCEKSMSQV
DVDSGIENMEVDENDRREKRSLTDKEPPSGSEVSEEQALQLVSKIFRVSWKDRDRDVIFL
TSLSVQFKQNPKEVYSDFKDLIGQILMEVLMMSTQSRDENPFASLTATSQPIAAAARSPD
RNLILNTGSNPGTSPMFCSVGSFGSGSLSSVGGSGSTSVSDSCSDHFTIETCKETEMLNY
LIECFDRVGIEERKAPKMCSQPAVSQLLSNIRSQCISHAALVLHGSLTQPRLLQQQSLLV
PYMLCRNLPFGFIQELVRTTYQDEEVFKQIFIPILQGLALASKECSLDSDNFKYPLMALG
ELCEIKFGKTHPMCSLVVSLPLWLPKSLSPGAGRELQRLSYLGAFFSLSVFAEDDTKVVE
KYFSGPAITLENNRVVSQSLQHYLELARLELFKILHNILLNGETREAALSYMAAVVNANM
KKAQMQTDDRLVSTDGFMLNFLWVLQQLSTKIKLETVDPTYIFHPRCRIILPTDETRVKA
TMEDVTDWMAELYRDPSQFSEPKFPTECFFLTLHAHHLSILPSCRRYIRRLRAIRELNRT
VEDLKNNESQWKDSPLATRHREMLKRCKTQLKKLVRCKACADAGLLDENFLRRCLNFYGM
VIQLMLRILDPAYPNMKLPLNPDVPKVFAALPEFYVEDVAEFLFFIVQYAPQVLYEPCTQ
DIVMFLVVMLCNQNYIRNPYLIAKLVEVMFMTNPAVQPRTQKFFEMIENHPLSTKLLVPS
LMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGTFMEEFNSGKQFVRYINM
LINDTTFLLDESLESLKRIHEVQEEMKNKEQWDLLPRDQQQARQSQLAQDERVSRSYLAL
ATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPK
KLLDQLTDIYLQLDCARFAKAIADDQRSYSKELFEEVISKMRKAGIKSTIAIEKFKLLAE
KVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGTIMDRSIILRHLLNSSTDP
FNRQTLTENMLEPVPELKEQIQAWMRDKQNADH
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctgagcgcggatgagattcgtcgaaggcgccttgctcggcttgcaggtggg
ccatcttcccagcccaccactccacttacgtccccacaaagagagaacccaccaggacca
cctgtagctgcgccagccccgggtccatcccacaatcttggtctaaatgtccatagtatg
accccagctacctctccaattggtgcatcaggagtagcccaccgaagccagagcagcgaa
ggagtgagttcacttagcagttctccatccaatagccttgaaacgcaatcccagtctctt
tcccggtcccagagcatggatattgatagtgtctcctgtgagaaaagtatgtctcaggtg
gatgtagattcaggaattgaaaatatggaggtcgatgagaatgatcgcagagagaaaagg
agcctgactgataaggagcctccatcaggatctgaggtatcggaggagcaggccttacaa
ctggtctctaagatttttagagtctcctggaaggatcgagacagagatgtaattttcctt
acttcgctctctgtgcaatttaagcagaacccaaaagaagtgtactcagattttaaggac
ttgattggtcagattttaatggaagttctgatgatgtccactcagtcaagagatgaaaac
ccgtttgccagcctgacggctacatcacagccaattgcagcagctgcccggtcacctgat
agaaacctgattctaaacactggctccaacccaggaactagccctatgttctgtagtgtg
ggttcctttggttctggttccttatccagtgtgggaggctctggcagcacaagtgtttct
gattcctgcagtgaccatttcaccattgaaacttgcaaggagacagagatgctgaactac
ctcattgagtgttttgacagagttggaatagaggagagaaaagcaccaaagatgtgtagc
cagccagcggttagtcagttactgagcaacatccgatctcagtgcatttcccatgctgct
ttggtactacatggttccttaacacaaccaaggttattgcagcagcagtctctgctggta
ccatacatgctgtgtaggaacctcccgtttggcttcatccaagaattggtgagaacaacc
taccaggatgaagaggtgttcaaacagatttttatccccatcttacaaggcctggctctt
gcttccaaagagtgctcccttgatagtgacaattttaaataccctcttatggcattaggt
gaactgtgtgaaatcaagtttgggaaaacacatcccatgtgcagcttggttgtatctttg
cccttgtggttgcctaaatctttaagcccgggtgcaggacgtgagctgcaaagactgtcg
taccttggcgctttcttcagtctctctgtctttgctgaagatgatactaaagtggttgaa
aagtatttctcagggcctgccattactcttgaaaacaaccgtgttgttagccaatctttg
cagcattacctggaattggcaaggctagaactgttcaagattctacataatattttgctg
aatggggaaactcgggaggcagctcttagttacatggcagctgttgtcaatgccaacatg
aagaaggcacagatgcagacagatgatcggttggtgtccacagatggttttatgctcaat
ttcctatgggttctgcagcagctaagcacaaaaattaagctagaaacagttgatcccaca
tatatattccatccgaggtgtcgcatcatcctcccaacggatgagaccagagtgaaagca
accatggaggatgttacagactggatggctgagctttacagggatccgtctcaattttct
gagccgaaattcccaacggaatgcttctttctaaccctgcatgcccaccacctctccatc
ctgccaagctgccgccgctacatccgtagactgcgggccatcagggaactcaacaggact
gtcgaggatctgaaaaacaatgagagtcaatggaaagattctcctctggctaccagacat
cgagagatgctgaaacgctgtaaaacgcagcttaagaagctggtgcgttgcaaggcgtgt
gcagatgctggcttgctagatgaaaactttttgaggagatgtctgaatttttatggcatg
gtgattcagctgatgcttcgcatcctcgaccctgcttaccccaacatgaagctgccttta
aatcctgacgttccgaaggtgtttgcagcactgccggagttctacgtggaagatgtggct
gaatttttattttttattgttcaatatgctcctcaggtgctttatgagccctgcactcag
gacattgtgatgttccttgttgtgatgctgtgcaaccagaactacatccgaaacccttat
ctgattgctaagctggtggaggtgatgttcatgacaaaccctgccgttcagccacggacg
cagaagttctttgaaatgattgagaatcatcctctctccactaaattgttagtcccttca
ttgatgaagttttatacagatgttgagcacactggagccaccagcgagttctatgacaaa
tttaccatccgctaccacatcagtaccattttcaaaagcctctggcagaacatagctcac
catggcaccttcatggaagagttcaactctgggaagcagtttgttcgctacatcaacatg
ctgataaatgacacaacgtttttgctggatgagagtctggagtccctaaagcgtattcat
gaagtccaagaggagatgaagaacaaggaacagtgggatctgctgccaagggaccagcaa
caggctcgtcagtctcagcttgctcaggatgagcgtgtgtctcgctcatatcttgccctg
gcaacagaaactgttgatatgttccatatccttaccaagcaggttcagaagcctttcctc
agacctgaacttggaccacgattggctgctatgctgaactttaaccttcagcaactgtgt
ggccctaagtgccgtgacctgaaagttgaaaaccctgagaaatatgggtttgaaccaaag
aagctgttggaccaactgactgatatttacctgcagctagattgtgctcgttttgctaaa
gcaattgctgatgaccagaggtcctacagcaaagagctgtttgaggaggttatctcgaag
atgaggaaggctggcatcaagtcaacaatagcaatagagaaattcaaactgctggcagag
aaggtggaggaaattgttgccaagaatgcccgtgcggaaatcgattatagtgatgctcca
gatgaatttagagatccactcatggacaccctgatgactgaccctgtaaggctgccatct
ggaactatcatggacagatcaataatcctacggcaccttttgaactcctccactgacccc
ttcaatcggcagacgctgacagaaaacatgctggaaccagtgccagaactgaaagagcaa
atccaagcctggatgagagacaagcagaatgctgaccattaa
DBGET
integrated database retrieval system
