Gavialis gangeticus (Gharial): 109293777
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Entry
109293777 CDS
T07453
Symbol
PRDM2
Name
(RefSeq) PR domain zinc finger protein 2
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn00310
Lysine degradation
ggn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
109293777 (PRDM2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ggn03000
]
109293777 (PRDM2)
03036 Chromosome and associated proteins [BR:
ggn03036
]
109293777 (PRDM2)
Enzymes [BR:
ggn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
109293777 (PRDM2)
Transcription factors [BR:
ggn03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
109293777 (PRDM2)
Chromosome and associated proteins [BR:
ggn03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
109293777 (PRDM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
SET
zf-C2H2_6
zf-C2H2_ZNF462_1st
zf-C2HE
zf-C2H2_11
zf-C2HC_2
Motif
Other DBs
NCBI-GeneID:
109293777
NCBI-ProteinID:
XP_019367421
LinkDB
All DBs
Position
Unknown
AA seq
1664 aa
AA seq
DB search
MNQNTTESSGAVETLADVPEHVLKGLPEEVRLFPSAVDKTRLGVWATKSILKGKKFGPFL
GDKKKRSQVKSNVYMWEVYYPNLGWMCVDATDPKKGNWLRYVNWARSGKEQNLFPLEINR
TIYYKTLKPIEPGQELLVWYNGEDNAEIAAALEEERAQHRSKRHSPKAKKGKKKAQEGKN
KGKKATDTKQNKTDLDFTSRDMKDSKEGHKEEDEKPSVSAVLSLEQTAVIQEMVNQDALP
KLVIPSLTSEQQIMSEEKSEAITSDDLEEEEEEEEEEEDEDEEEMEDASMPIESGGKESL
LCEEKLDSPEEQRSMSEESPESSPKKMPVVKIPKVRGESNGDLQETFMFPCQHCERKFTT
KQGLERHMHIHISTVHHAFKCRYCGKAFGTQINRRRHERRHEAGPKRKPFLTLASSQQSD
NIADNQILVDDGLKDELNVSNLAQDSAILDPEKVSQEMSNCAFVEENKEPKELHPCKYCK
KVFGTHTNMRRHQRRVHERHLIPKGVRRKGCFIEEPQLQTEQAQPAQNVYIANTELEEEG
EADDVYIMDISSNISENLNYYIDGKIQSNSSTSNCDVIEMESNSAELYGLNCLITPVTVE
ISQNVKVTQMHVNDLPKEPSSSGSNESKKRRTASPPLIPKIKTEVDPEPVTPSGSLNLPL
SISTAESLPFHKEKSVYLSSKLKQLLQTQDGNKITTSTEIPKLGPAASSPILPPVSSRFK
RRTSSPPSSPQHSPALRDFGKLGDGKTVWNDTVLGSKMPKLESHSNSPAWSLTGREEKET
MSPLCFEDYKISKEWAGPPTFGNVCNQQPLDLSSGVKQRSDVKSKNQVPWESVLDLSVHK
KPCSDTEVRDYKENNLVQPACSSIKKKPTTCMLEKVLLNEYNGMDAAAESTPDLNRTLSP
CKSTELQPEPDTELSLSAPSVEAHSLSSCTSPLPQMSSASSSCQLPPLLTPTNPPSPPPC
PPVLTVATSPPPLLPTVPLPLSDACASVTHTPCPSPLSNATTQSPLPVLSPTVSPSPSPA
PSVDPLTSAISPGPPTLSSSSSSSSPSSSFSSSSSSSSPSPPPLSVVSSVVSPADNLENP
LPIIAFKQEEMESEHEKPREDPQTSSEAGVVQETFNKSFVCNVCDSPFLSIKDLTKHLSV
HAEEWPFKCEFCVQLFRDKMDLSEHRFLLHGVGNIFVCSVCKKEFAFLCNLQQHQRDLHP
DKECTHHEFESGTLRPQNFTDPAKANIEHMQSLPEDSLELSKEEEDEDLNDSSEELYTTI
KIMASGVKAKDPDVRMGLNQHYPSFKPPPFQYHHRNPMGIGATATNFTTHNIPQTFTTAI
RCTKCGKSVDNMPELHKHILACASASDKKRYTPKKNPVPLKQTVQPKNGVVVIAGTGKNA
FRRMGQPKRLNFNVEISKMSSSKLKLSALKKKNQLVQKAILQKKKSAQQKADLKNSASES
DSHICPYCNREFTYIGSLNKHASYSCPKKPVSPSSKKSSSKKAGSSSSLASSDKGSNQRR
RTADAEIKMQSMQAHLGKTRARTSGPTQIQLPSASFKSKQNVKFIPPLRSKKPNSSSSLR
NSSPMRVSKMTHAEGKKPKAVAKNSSGISSKASRKLHVRIQRNKAVLPNKSAVASKKKAD
RFSVKYRERIGGPVTRSLQQAANADTIESKRDESSAKQELKDFR
NT seq
4995 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagaacacaactgaatcttcaggagcagttgagaccttggctgatgtacctgaa
catgtgctgaaagggcttcctgaggaagtgaggcttttcccatctgctgttgacaagaca
cggcttggtgtttgggcaacaaagtcaattttgaaaggcaaaaagtttggaccatttctt
ggtgataagaaaaaaagatcccaagttaaaagcaatgtgtacatgtgggaggtgtattac
ccaaacctggggtggatgtgtgttgatgccaccgatccaaagaaagggaactggttgcgg
tatgtgaactgggctcgttctggaaaagagcaaaatctgttcccactggagatcaacagg
accatttactacaaaacattaaagcccatcgagccgggccaggagctgctcgtctggtac
aatggggaagacaacgccgagatcgccgccgcgctagaggaggagcgagcccagcaccgc
agcaagaggcactcgcccaaagccaagaaggggaagaaaaaagcccaagagggtaaaaac
aaaggaaagaaggcaacagatacaaagcagaacaagactgatttagattttacttccaga
gatatgaaggactctaaagagggccataaagaggaagatgaaaagccttctgtttctgct
gtgctttcattggaacaaacagctgtgattcaggagatggtaaatcaagatgcgcttcca
aaactggtgatccccagtcttacaagtgagcaacaaataatgtctgaagagaaatcagaa
gctattacatcagacgatttggaggaagaggaggaggaggaggaagaggaggaggacgaa
gatgaagaggagatggaagatgccagtatgcccatcgaaagtggtggaaaagagtctctc
ctgtgtgaagaaaagctggactctccagaagaacaaagaagtatgtcagaagaatctcca
gaaagctctccaaaaaaaatgccagttgtgaaaattcctaaagtaagaggtgaatccaat
ggcgacctccaggaaactttcatgtttccctgtcagcattgtgagaggaaatttacaaca
aagcaaggacttgaacgtcacatgcatatccacatatctactgtccatcatgctttcaaa
tgccgctattgtgggaaagcctttggtactcagattaaccggcgaaggcatgagcggcgt
catgaggcagggccaaaaaggaaaccattcttaacattagcttcctcgcagcagtcagat
aatattgctgataaccaaatacttgtagatgacggtcttaaagatgaactaaatgtttct
aatcttgcacaagactctgcaatcttggatcctgagaaggtctcccaagaaatgtcaaat
tgtgcttttgtggaagagaacaaggaacccaaagaattgcatccttgcaaatattgtaaa
aaggtttttggaactcacaccaacatgcgtaggcaccagcgtagggttcatgaacgtcat
cttattcccaaaggtgtcaggagaaaaggatgctttattgaagaaccacagcttcaaaca
gaacaggcccaaccagcccagaatgtgtatatagcaaatacagagttagaagaagaaggt
gaagcagatgatgtatacattatggatatttccagcaatatttctgaaaatttaaactac
tatattgatggtaaaattcagtccaatagtagcactagcaattgtgatgtgattgagatg
gaatccaactctgcagagttgtatggattaaattgtttaattactccagtcacagtggaa
atttctcaaaatgtaaaggttacgcagatgcatgtgaatgatcttcccaaggagccctca
agcagtggaagcaatgaatcaaagaagagaagaacagctagtcctcctcttataccaaaa
ataaaaacggaagtagatccagaacctgtaacgccatcaggttcattaaatcttcctctt
agcatttcaacagctgagagtttaccttttcacaaagaaaaaagtgtgtatttgtcatct
aaattaaaacaactgcttcagacacaggatggtaataagataactacatcaactgaaatt
cctaaattaggacctgctgcatcatcacccattttgcctccagtttctagtaggtttaag
agaagaaccagctctcctcctagttctccgcagcacagtccagcccttcgggactttggc
aaactgggtgatgggaaaactgtgtggaatgatacagttctaggttcaaagatgccaaag
ttagaaagccacagcaactcgcctgcatggagcttgactggaagggaggaaaaagaaacc
atgagccctctttgctttgaagactacaaaatatctaaggaatgggcaggccctcctacc
ttcggtaatgtgtgcaaccagcagccgttagatttgtccagtggtgtaaagcaacggtct
gatgtcaaaagtaagaaccaggttccttgggaatctgtattagatttaagtgtgcataag
aaaccttgcagtgacactgaagttagagactataaagaaaataatctggtgcagccagca
tgtagtagtattaagaagaaaccgaccacgtgcatgttagaaaaagttctactgaatgaa
tataacgggatggatgcagctgcagagagcacaccagatttgaataggaccctcagtcca
tgtaaatcaacagaactacaaccagagcccgacactgagcttagtctgtctgcgccttct
gttgaggctcattcacttagttcctgtacttcacctttgcctcagatgtcgtctgcatca
tcctcatgccagctaccccctctcctaactccaacaaatcctccttccccaccaccttgt
ccccctgttttaacagttgctacatcaccccctccactccttcccactgttcctttaccc
ctttcagatgcctgtgccagtgtcactcacactccttgcccatcaccactttcaaatgct
acaacacagtccccacttcccgtcctttcacccacagtatccccctctccatcccctgca
ccttctgttgatcctctcacttctgctatttcacctggccctcctacactctcctcctcc
tcctcctcgtcatcgccttcctcctctttttcttcctcctcatcctcttcatctccttct
cctcctcctctctcagtagtttcttctgttgtttcccctgctgataatctagaaaacccc
ctgcccatcatagcttttaagcaagaagaaatggaaagtgaacatgagaaaccaagggaa
gatccacagacttcaagtgaagcaggtgtagttcaagaaacattcaataaaagctttgtg
tgcaatgtttgtgattcaccctttctttctattaaagacctaactaagcatttatctgtt
catgctgaagaatggcccttcaaatgtgaattctgtgtacagctgtttagagataaaatg
gacttgtcagagcatcgctttttgcttcatggggtaggaaatatctttgtttgctcagta
tgtaaaaaggaatttgcttttttatgcaatttgcaacagcatcaacgagatctccatccg
gataaagaatgcacacatcatgaatttgaaagtggcacccttagaccccagaattttaca
gatcctgctaaagcaaatatcgaacatatgcaaagtctaccagaagattccttagaactc
tctaaagaggaggaggatgaagacctaaatgactcctctgaagagctttatacaaccata
aaaataatggcttctggagtaaaggcaaaagacccagatgtccgtatgggcctcaatcaa
cactatccgagttttaagccacctccatttcagtatcaccaccgaaatcctatgggtatt
ggtgccactgctacaaatttcacaacccacaatattccacagactttcactactgccatt
cgttgtacaaaatgtgggaaaagtgttgataacatgcctgaattacacaaacacatcttg
gcatgcgcctctgccagtgataaaaagagatatacacccaaaaaaaatccagtaccactg
aaacagactgttcagcctaaaaatggtgtggtagttatagctggcactggaaagaatgct
ttcaggcgaatgggacaacctaagagacttaatttcaacgttgagattagcaaaatgtcc
tctagtaaactaaaattaagtgcattgaagaagaaaaatcagcttgtccagaaagcaatc
ttgcaaaaaaagaaatctgcacaacagaaggccgacttgaaaaatagtgcatccgagtcg
gactctcacatctgcccgtactgtaacagagagttcacttacattggaagtttgaacaaa
cacgcatcgtatagttgccccaaaaaacctgtctccccatcctcgaaaaaaagctcatca
aaaaaagctggaagttcctcatcacttgcaagcagtgataaaggcagcaaccagcgtagg
cgaacagcagacgccgaaatcaaaatgcagagtatgcaggctcatttgggaaaaacgaga
gcacgaacctcggggcccacgcagattcagttgccctctgcatctttcaaatccaagcaa
aatgtaaaattcatacctccacttagatcaaaaaagccaaattcatcatcttctttaagg
aactccagccccatgagagtgtccaaaatgactcatgctgaagggaaaaaaccgaaagcg
gtagctaagaacagttctggaatctcgagcaaagcgtctcggaagttgcatgtaagaata
cagaggaataaagccgttttgccaaataagtctgctgtggcaagcaagaagaaggcagac
aggttcagtgtaaaatatagggagaggattggaggacctgtcacgcgaagcttacagcag
gcagctaatgcagacacaatagaaagcaagagagatgaaagcagtgcaaaacaagaacta
aaagacttcaggtaa
DBGET
integrated database retrieval system
