Gavialis gangeticus (Gharial): 109294085
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Entry
109294085 CDS
T07453
Symbol
RBBP4
Name
(RefSeq) histone-binding protein RBBP4 isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn03082
ATP-dependent chromatin remodeling
ggn03083
Polycomb repressive complex
ggn04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109294085 (RBBP4)
03083 Polycomb repressive complex
109294085 (RBBP4)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
109294085 (RBBP4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ggn03036
]
109294085 (RBBP4)
Chromosome and associated proteins [BR:
ggn03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
109294085 (RBBP4)
Histone modification proteins
HAT complexes
HATB complex
109294085 (RBBP4)
HDAC complexes
Sin3A-HDAC complex
109294085 (RBBP4)
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
109294085 (RBBP4)
PRC2.2
109294085 (RBBP4)
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
109294085 (RBBP4)
Heterochromatin formation proteins
Other heterochromatin formation proteins
109294085 (RBBP4)
Chromatin remodeling factors
NuRD complex
109294085 (RBBP4)
NuRF complex
109294085 (RBBP4)
NuRF complex (fruit fly)
109294085 (RBBP4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1C_H4-bd
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
WD_LRWD1
Beta-prop_DCAF12
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_RIG_1st
WD40_RFWD3
MIOS_WD40
eIF2A
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
109294085
NCBI-ProteinID:
XP_019367853
LinkDB
All DBs
Position
Unknown
AA seq
431 aa
AA seq
DB search
MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD
FSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG
YGLSWNPNLSGHLLSASDDHIPLFSKTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVS
WHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSA
DKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQ
SPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDP
EGSVDPEGQGS
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaaggaagcagcctttgacgatgcggtggaggagcgggtgatcaacgaggag
tacaagatctggaagaagaacacacccttcctctatgacctggtaatgacccacgcgctt
gagtggcccagcttgactgcccagtggcttcctgatgtaacgagacccgaaggcaaagat
ttcagtattcaccggctagtcctggggacacacacttcagacgagcaaaatcatcttgtg
atagccagcgtgcagctgcccaatgacgatgcacagtttgatgcttcacattatgatagt
gagaaaggagagtttggaggttttggctctgttagtgggaagattgagattgaaatcaag
atcaaccatgaaggagaagtgaacagagcacgttacatgccccaaaatccatgtatcatt
gctacaaaaactccatccagtgatgtcctggtctttgactacaccaagcacccttctaag
ccagacccttctggtgagtgtaatcctgacttgcgtcttcgtggacaccagaaggaaggc
tatgggctgtcatggaacccaaatcttagcggacatttgcttagtgcttctgatgatcat
ataccccttttctctaagaccatctgcttgtgggatattagtgctgttccaaaggaaggc
aaagtggtggatgcaaagaccatctttactggacatacagcagtagtggaagatgtatct
tggcacctgctccatgaatctctctttggatctgttgctgatgatcagaagctcatgatc
tgggacacccggtcaaacaacacctccaagcccagtcattcagtggatgctcacacggct
gaagtgaactgcctgtctttcaatccctatagtgagtttattttggccacaggatcagct
gataagactgttgctttgtgggatctgagaaacctgaaactgaagctccactcatttgaa
tcacacaaagatgaaatatttcaggtgcagtggtctccccacaatgaaaccattttggct
tccagtggtactgaccgtaggctaaatgtctgggacttaagtaaaattggagaagagcag
tctcctgaggatgcagaggatggcccaccagagctcttgtttattcatggtggtcacact
gcaaagatatctgatttctcctggaatcccaatgagccctgggtaatttgttctgtatca
gaagacaatatcatgcaagtctggcaaatggctgagaacatatataatgatgaagaccct
gaaggaagtgtggatccagaaggtcaagggtcctag
DBGET
integrated database retrieval system
