Gavialis gangeticus (Gharial): 109294143
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Entry
109294143 CDS
T07453
Symbol
SRRM1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn03013
Nucleocytoplasmic transport
ggn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109294143 (SRRM1)
03015 mRNA surveillance pathway
109294143 (SRRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ggn03019
]
109294143 (SRRM1)
03041 Spliceosome [BR:
ggn03041
]
109294143 (SRRM1)
Messenger RNA biogenesis [BR:
ggn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
109294143 (SRRM1)
Spliceosome [BR:
ggn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
109294143 (SRRM1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
109294143
NCBI-ProteinID:
XP_019367964
LinkDB
All DBs
Position
Unknown
AA seq
920 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEIL
GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP
SAFLELKKEEIKQRQIEQEKLASMKKQDEDKDKDKDKDKRDKEDKDSREKRERSRSPRRR
KSRSPSPRRRSSPVRRERKRSHSRSPHHRTKSRSITPAPEKKEETPEPEPSVKAKETLIQ
EATSTSDILKAPKPEPVPDTKETSPEKSLKKEKEKEKEKEKPRQRSPSRSKSRSRSRSRS
PSHSRPRRRHRSRSRSYSPRRRPSPRRRPSPRRRSPPRRMPPPPRHRRSRSPVRRRRRSS
ASLSGSSSSSSSSRSRSPPKKPPKRIVSSPPRKTRRLSPSASPPRRRHRPSPPASPPPKP
RRSPTPQQTNRARKGRGSVSPGRTSAPKHKNPEKRESPSPAPKPRKVELSESEEDKGGKM
AAADSVQQRRQYRRQNQQSSSGTPLLYSGSSSSSEEERPKRSNVKNGEVGRRRRHSHSRS
PSPSPRKRQKESSPRMQMGKRWQSPVIKSRRRRSPSPPPARRRRSPSPAPPPRRRRSPSL
PRRRSPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTSSPPPPPKRRASPSPQSKRRVS
HSPPPKQRSSPAAKRRSPSLSSKHRKGSPPSRSNRETRSPLQNKRHSPSPRPRASHTSAS
PPPLRRGASSSPQRRQSPSPSTRPIRRVSRTPEPKKTKASTPSPQSARRVSSSRSASGSP
EPAPKKHQAPPSPARSRSPSTNWSPQPVKKAKSPTQSPSPARNSDQEGGGKKKKKKKDKK
HKKDKKHKKHKKHKKEKAAAAAAAAVVAATTTSPQEDKEAETEPKKETESEAEDNLDDLE
KHLREKALRSMRKAQVSPPS
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggcttcttccgcggaacaagtgcagaacaggacaatcgcttcagcaacaag
cagaagaagctgttgaagcagctgaaatttgcagaatgtctagaaaagaaagtggacatg
agtaaagtaaacctggaagtaatcaaaccatggataacaaaacgagtaacagaaatcctt
gggtttgaagatgatgtagttattgaatttatattcaaccagttggaagtgaagaatcca
gattccaaaatgatgcaaatcaacctgactgggtttttgaatggaaaaaatgctagagag
ttcatgggtgaactgtggccactgctgctaagtgcacaagaaaacatagctggtattccc
tctgctttcctggagctgaagaaagaagagataaaacaaagacagattgagcaagagaag
ttggcttctatgaagaagcaagatgaggacaaggacaaggataaggacaaagacaagagg
gacaaggaagacaaagacagcagagaaaaaagggagagatccagaagcccaagaagacgc
aaatcaagatctccttcccctagaaggagatcgtcccctgtcaggagagagagaaaacgc
agccattctcgatcccctcatcatagaactaagagccgtagcatcacccctgcaccagaa
aagaaagaggagactccagagccagagccttctgtaaaagcaaaggaaactttgattcaa
gaggcaacctcaactagtgatatcctaaaagctcctaaacctgagcctgtaccagatact
aaagaaacttctccagaaaaaagtttaaaaaaagagaaagagaaagaaaaagaaaaagag
aagcctcgtcagagatcaccgtctcggtccaagtcaaggtcacggtcaaggtctcggtcc
ccttctcattccagaccaagaaggcgtcatagatcaaggtcaaggtcttactcccctaga
aggcggccaagcccaagacgacggccctctcccaggagaagaagccctccaaggcgaatg
cctccaccacccagacacagaagaagcagatccccagtgagaaggagaagaaggtcatca
gcatctttatctggaagtagctcgtcttcctcctcttcgcgttcgcgatcaccaccaaag
aaaccaccaaaaagaattgtatccagtcctcctcgtaagacgcgtagactctccccttct
gcaagtcctccaaggcggaggcacagaccatccccgccagcaagtccaccaccaaaacca
cgtaggtctccaaccccacaacagacgaatcgtgcaagaaaaggccgtggctctgtttct
ccaggcagaacatcagcacctaaacataagaatcctgaaaaaagagagtctccatcacca
gcaccaaagcctaggaaagtagaattgtctgaatcagaagaagataaaggtggtaaaatg
gctgctgcagattctgtgcagcagagacgtcagtacagaaggcagaaccagcagtcttca
tctggtacaccactactttactctggttcatcatcttcctctgaagaggaacgacctaaa
agatcaaatgtaaagaatggtgaagtgggtaggcgcaggcgacactcgcattcacggagt
ccgtcaccttctccacgaaaacggcaaaaagagtcctcccctcggatgcagatgggaaag
aggtggcaatcaccagtgattaaaagcaggaggaggagaagtccatcaccacctccggcc
agaagacggcgctcaccttccccagcccctccaccaaggcggcgcagatcaccttcatta
cctaggcgaaggtctccatcgccacctccacgcagacgttcaccttctcccagaagatac
tctcctccaatacaacgacgatactctccttctcctcccccaaagagaagaaccagttct
ccccctccccctccaaagcgaagagcatcaccttcgccacagtcaaaacgcagagtctcg
cattctcctccaccaaaacaaagaagttctccagctgcaaagagacgttccccatctcta
tcttccaagcataggaagggatctccccccagcaggtctaatcgtgaaacccgatccccc
ttacaaaacaaacggcattcaccttcaccacggcctagagcttcccatacttctgcaagt
ccacccccactgcgaaggggagcttcatcttcaccccagagaaggcagtctccatctcca
agtactcgacccatcagaagagtgtcaagaaccccagaacccaagaagacaaaggcttcc
acaccaagtccacagtcagcgagaagagtgtcgtcatccaggtctgcatcaggatcacct
gagccagcacctaagaaacatcaagctcctccatccccagctcggtctcggtccccttcc
actaactggtctccgcaacctgtgaaaaaggctaaaagccccacacagagtccatcacct
gcaaggaattctgatcaggaaggtggggggaagaagaagaagaaaaagaaggataagaaa
cataaaaaggataaaaagcacaagaaacacaaaaaacacaagaaagagaaggctgctgca
gcggctgctgctgctgtagtggcagctactaccacatcaccacaggaggacaaagaagca
gagacagaacctaaaaaggagactgaaagtgaagctgaagataatctggatgatctagaa
aaacatctgcgagagaaggcactgagatcaatgaggaaggcacaagtgtcaccaccgtct
tag
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