Gavialis gangeticus (Gharial): 109294181
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Entry
109294181 CDS
T07453
Symbol
ARID1A
Name
(RefSeq) AT-rich interactive domain-containing protein 1A
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109294181 (ARID1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ggn03000
]
109294181 (ARID1A)
03021 Transcription machinery [BR:
ggn03021
]
109294181 (ARID1A)
03036 Chromosome and associated proteins [BR:
ggn03036
]
109294181 (ARID1A)
Transcription factors [BR:
ggn03000
]
Eukaryotic type
Helix-turn-helix
ARID
109294181 (ARID1A)
Transcription machinery [BR:
ggn03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
109294181 (ARID1A)
Chromosome and associated proteins [BR:
ggn03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
109294181 (ARID1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
109294181
NCBI-ProteinID:
XP_019368025
LinkDB
All DBs
Position
Unknown
AA seq
1899 aa
AA seq
DB search
MDQMGKMRPQPYGGSNPYAQQQGPQSGPQQGHGYPGQPYGPQTPQRYPMAMQGRTQSAMG
SISYAQQIPPYGQQGPSAYGQQSQTPYYNQQGPHSQQQQPPYSQQPPSQTPHTQPSYQQQ
QQPQSQPPQLQSSQPAYSQQQSQPQHQQSPSPYPQQPSTAQQHQPSQPPYTQQQSQSPYQ
QQQTPQTASSALSQQSSSYPQSQPQQQQQQSAYSQQRFPPPQELSQDSFGSQASSAPSMA
SSKGQEDMNLNLQSRPSSLPDLSGSIDDLPMGTEGALSPGVSTSGISSSQGEQSNPAQSP
FSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPGNQMPPRPPSGQSDSILHPS
MNQSNIAQDRGYMQRNPQIPQYSSPQPGSALSPRQSSGGQMHAGMGPYQQNSMASYGPQG
AQYGPQGGYPRQPNYNAMPNANYPSPGMGGTMNPMGAGSQMHGQTGVPPYTGLPPGRMSH
ATMGNRPYGPNMANMPPQVGTGMCPPPGGMNRKAQEAAAAAMHAAANSIQNRPPGYPNMN
QGGVMGTGPPYGQGINSMAGMINPQGAPYPMGANMANNSAGMAASPEMMGLGDVKLTPAA
KMNNKADGTPKTESKSKKSSSSTTTNEKITKLYELGGEPERKLWVDRYLAFTEEKAMGMT
NLPAVGRKPLDLYRLYISVKEIGGLTQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQC
LYAFECKIERGEDPPPDIFAAADSKKSQTKIQPPSPAGSGSMQGPQTPQSTSSSMAEGGD
LKPPTPASTPHSQMPPLSGIRSNSVGLQDAFADGSDPTFQKRNSMTPNPGYQPSMNTSDM
MGRMSYEPNKDPYSSMRKAPGSDPFLSSGQGPNSAMGDPYNRAAGPGMGNMVMGQRQHYP
YGGPYERVRTEAGMGPEGSLGTGTPQPNILPSTPDSGMYSPSRYPQQQQQQQQQQQQRHD
SYGNQFSTQGTSSGSPFPSQQTTMYQQQQQNYKRPMDGTYGPPAKRHEGEMYNVPYSAGQ
GQAQQQLPAAQTQQPSQQQTAQPSPQQDMYNQYGSTYPATDRRPSGGPQNQFPFQFSRER
VSAPPGSNAQQNMPPQMMGGPIQSTPEGPQQGTMWQGRNEIGYSYPNRQSTGSTPQGPAY
HGVNRTDEILHSDQRVNHEGPWPSHGNRQPPYGPAAPVPPMTRPPQSNYQTPPSMQNHIP
QVSSPAPLPRPLENRTSPSKSPFLHSGMKMQKAGPPVPASHIAPAAVQPPMIRRDITFPP
GSVEATQPVLKQRRRLTAKDIGTPEAWRVMMSLKSGLLAESTWALDTINILLYDDNSIMT
FNLSQLPGLLELLVEYFRRCLIEIFGILKEYEVGDPGQRTLLDPERFCKSSSPSLDEGEY
EEELQSPNCEEEEEEEEEEEAAFASKDKAPLESSEEKLVSKFDKLPVKIVQKNDPFVVDY
SDKLGRVQEFESGLLHWRIGGGDTTEHIQTHFESKMELPWIHRRASCSAASRKRLAAESN
PGTREGENPPSDGPPEKRITATMDDMLSARPGSLPEEEEEVKNSEATKESSKFPFGISPA
QSHRNIKILEDEPHSKDETPLCTLLDWQDSLAKRCICVSNIIRSLSFVPGNDFEMSKHPG
LLLILGKLILLHHKHPERKQAPLTYEKEEEQDQGVSCNKVEWWWDCLEMLRENTLVTLAN
ISGQLDLSPYPESICLPILDGLLHWAVCPSAEAQDPFPTLGPSAVLSPQRLVLETLSKLS
IQDNNVDLILATPPFSRLEKLYSTMVRFLSDRKNPVCREMAVVLLANLAQGDSLAARAIA
VQKGSIGNLLGFLEDSLAATQFQQSQASLMHMQNPPFESTSVDMMRRAARALLALAKVDE
NHSEFTLYESRLLDISVSPLMNSLVSQVICDVLFLIGQS
NT seq
5700 nt
NT seq
+upstream
nt +downstream
nt
atggatcagatggggaagatgagacctcagccatatggaggaagtaacccatacgcacag
cagcagggacctcagtcagggccgcagcaaggacatggatatccaggacagccatatggg
ccacagactccccagagatatccaatggcaatgcaaggcaggacgcaaagtgcaatgggc
agcatctcatatgcacagcagattcctccttacggacagcagggccccagcgcgtatggg
cagcagagccagactccgtattacaaccagcaaggtcctcattcccaacagcagcagcct
ccgtattctcagcagcccccatcccagacccctcacacccagccttcttatcagcagcaa
cagcagcctcagtctcagcctccgcagcttcagtcatcccagcctgcgtactcccagcag
cagtcccagccacagcatcaacagtccccatctccgtatcctcagcagccatccacagcc
cagcagcatcaaccaagtcagcccccctacacccagcagcagtcacagtcaccctaccag
cagcagcagactccacagacagcatcctcagctctctctcagcagtcctcttcataccct
cagtcacaaccgcagcagcagcagcagcagtctgcatactcccagcaacgattcccacct
cctcaggagttatctcaagactcatttgggtcacaggcatcatctgccccttcaatggct
tccagtaaaggacaagaagatatgaacttgaatcttcagtccagaccctccagcctgccg
gacctgtctgggtcaatagatgatctccccatgggtaccgaaggagccctgagtcctgga
gtaagcacgtcagggatatccagcagccaaggagagcagagtaacccagctcagtctcct
ttctctccacatacctctcctcacctaccaggaatcagaggaccttccccttcccctgtt
ggatctcctgccagtgttgctcagtcccgttctggcccactctcacctgctgctgtacca
ggcaatcagatgccaccccgaccacccagtgggcaatcggacagtatcctgcatccttcc
atgaaccagtcgaatatagcccaagaccgaggttacatgcagaggaatcctcagataccc
cagtatagctcccctcagcctggctctgccttatctccacgtcagtcttctggtggacag
atgcatgccgggatgggaccttatcagcagaactccatggcaagctatggaccgcagggg
gctcagtatgggcctcaaggaggctatcccaggcagccaaactacaatgccatgcccaat
gccaactaccccagtcccggaatgggaggaaccatgaacccaatgggagcagggagccag
atgcatggccagactggtgtgccaccttatactgggcttcccccgggaaggatgagccat
gcaaccatggggaacaggccctatggacccaacatggcaaatatgcctcctcaggtggga
acagggatgtgtcccccgccaggtggcatgaaccggaaagcacaagaagcagctgctgct
gccatgcatgctgctgccaactccattcagaacaggccacctggctatcccaacatgaac
caaggtggagtgatggggactgggcctccttatggacaaggaatcaacagtatggctggc
atgataaacccccagggtgctccatatcccatgggagcaaatatggctaacaactccgca
gggatggcagcaagtcctgagatgatgggccttggggatgtcaaactaacacctgcagct
aaaatgaacaacaaggcagatgggacgccaaaaacagaatccaagtcaaagaagtccagt
tcctctactaccaccaatgagaagattaccaaattgtacgagctgggtggtgaaccagaa
aggaagctttgggtagaccgttacctagccttcaccgaagagaaagcaatgggaatgacc
aatctcccagctgtgggcaggaaacccctagacctttaccggctctacatctccgtaaag
gagattggaggactgactcaggtcaacaaaaacaagaaatggcgggagttagccaccaat
ctcaatgtgggcacgtctagcagtgcagccagttctttgaagaagcagtatatccagtgt
ctctatgcctttgagtgcaagattgagcgaggcgaagaccctcctccagacatctttgca
gctgctgattcaaagaagtcccagactaagatacaacctccatctccagcgggttcaggc
tctatgcagggtccccagacacctcagtccaccagcagctctatggcagaaggaggagac
ttgaaacccccgactccagcatcaacaccacacagtcagatgccccctttgtcaggcatc
aggagcaactcagttggccttcaggatgcctttgcagatggcagtgatcccacgttccag
aagcggaactccatgactccaaatccagggtaccagcccagcatgaatacctctgacatg
atgggtcgcatgtcctacgagccaaataaggatccttatagcagtatgaggaaagctcct
ggaagtgatcccttcctgtcctcagggcagggccccaacagtgctatgggtgacccttat
aatcgtgctgcaggtccaggaatgggtaacatggtcatggggcaacggcaacactatccc
tatggagggccttacgagcgagtgaggacggaggctggaatgggacctgagggcagcttg
ggcaccggcactccgcagcccaacatcttgccttccacccctgactcggggatgtactct
cccagccgctatccacagcagcagcagcagcagcagcagcaacagcagcagagacatgat
tcctatggcaatcagttttccactcaaggcacatcttctggcagccccttccctagccag
caaaccaccatgtatcagcagcaacagcagaactataagcggccgatggatggcacttac
ggtccccctgccaagcggcatgaaggggagatgtacaacgtaccatacagcgctggacag
gggcaggcacagcagcagctgcctgcagcacagacccagcaaccgagccagcagcaaact
gcacagccttctccgcaacaggacatgtacaaccagtatgggagcacataccctgctact
gaccgccggccctctggagggccccagaaccagttcccattccagttcagcagagaaagg
gtctcggcccccccaggctcaaatgctcagcagaacatgcctcctcagatgatgggtggt
cccatccagtctactccagaggggccacagcagggcaccatgtggcaagggcgcaatgaa
atagggtacagctatccaaatcggcagagcactggctctacgccgcaggggcctgcttat
cacggagtaaaccgaacagatgaaatcctacattcagatcagagggtcaatcacgagggc
ccgtggccttcccatggcaaccgtcaacctccttatgggcccgctgcccctgtgccccca
atgacgagacccccacagtctaactaccagacccctcctagcatgcagaatcacattcct
caggtatccagcccagcacctctgcccagacctctggagaaccgcacctcacccagtaaa
tctccgttcctgcactcggggatgaaaatgcagaaggcaggacctcctgtccctgcctct
cacatagcaccagcagctgtgcagcctcccatgatacggagggacatcaccttcccaccc
ggatcagtggaagctacacaacctgtgctgaagcaaagaagacggttgacagcaaaagat
attgggactcctgaagcgtggagggtgatgatgtctctgaagtctgggctgctggctgaa
agtacgtgggccttagataccataaacatcctgctgtatgatgacaacagcataatgacc
ttcaacctcagccagctgccagggttgctagaactcctggtggaatacttccggcgttgc
ctgattgaaatttttgggatcctgaaggagtatgaggtgggagatccaggacaaagaaca
ctattggatcccgaaaggttctgcaagtcttcaagtccctctcttgacgagggggaatat
gaagaggagctgcagagcccgaactgtgaggaggaggaggaggaggaggaggaagaggag
gctgcctttgcgagcaaggacaaagcacccctggagagcagcgaggagaagctggtcagc
aagtttgacaagcttccagtcaagattgtgcagaaaaatgacccctttgtggtagattat
tccgacaagctggggcgcgtgcaggagtttgagagcgggttgctgcactggcggattggc
gggggcgacaccacggagcacatccagacccacttcgagagcaaaatggagctaccttgg
attcacagacgagcttcctgcagcgctgcctcaagaaaacgtctagcagccgagagcaat
ccgggcactagggagggagagaaccctccatctgatggccccccagagaagaggataacg
gccaccatggatgacatgctttcggcccggccagggtccctgccggaggaagaggaagag
gtcaaaaactcggaagcaacaaaggaaagcagcaagttcccatttggtatcagtccagct
cagagccacagaaacataaaaattctggaggacgaacctcacagtaaggatgagacgccc
ctgtgcaccctcctggattggcaggactctcttgccaaacgctgcatctgtgtctcaaat
atcatcaggagtttatcgtttgtgccgggcaatgactttgagatgtctaaacaccccggt
ctgctgctgattttagggaaactgattctgctgcatcacaagcatccagagcgcaaacag
gcaccgctgacgtacgagaaagaagaggagcaggaccaaggggtgagctgcaacaaggtg
gagtggtggtgggactgcttggagatgctacgtgaaaatacgttggttaccctggccaac
atttctggtcagttggacctctccccttacccagaaagcatctgtttgcctatcctggat
ggactcctccactgggcagtttgtccgtcagcagaggcccaggatcccttcccaaccttg
gggcccagtgctgtcctctcccctcagagactggttttggaaacactcagcaaactcagc
atccaggacaacaatgtggatttgattcttgcgactccccccttcagtcgcttggagaag
ctctacagcaccatggtgcgtttcctcagtgacagaaagaacccggtgtgtcgagagatg
gctgtggtactactggccaacttggcacagggtgacagcctggcagctcgagcgattgct
gtgcagaagggcagcattggcaacctgttgggcttcttggaggacagcctggcagccact
cagttccagcagagtcaggccagcttgatgcacatgcaaaacccaccctttgagtcgacg
agtgtggacatgatgcgtcgggcagcccgagcgctgcttgccctggccaaagtggacgag
aaccactctgagttcacgttatatgaatcgcggctgttggacatctccgtgtcgcctttg
atgaactccttggtttcacaagttatttgtgacgtactgtttttaattggccagtcatga
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integrated database retrieval system
