Gavialis gangeticus (Gharial): 109294321
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Entry
109294321 CDS
T07453
Symbol
SMURF1
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn04120
Ubiquitin mediated proteolysis
ggn04137
Mitophagy - animal
ggn04144
Endocytosis
ggn04340
Hedgehog signaling pathway
ggn04350
TGF-beta signaling pathway
ggn04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109294321 (SMURF1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
109294321 (SMURF1)
04350 TGF-beta signaling pathway
109294321 (SMURF1)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109294321 (SMURF1)
04137 Mitophagy - animal
109294321 (SMURF1)
09144 Cellular community - eukaryotes
04520 Adherens junction
109294321 (SMURF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ggn04131
]
109294321 (SMURF1)
04121 Ubiquitin system [BR:
ggn04121
]
109294321 (SMURF1)
03029 Mitochondrial biogenesis [BR:
ggn03029
]
109294321 (SMURF1)
Enzymes [BR:
ggn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
109294321 (SMURF1)
Membrane trafficking [BR:
ggn04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
109294321 (SMURF1)
Autophagy
Mitophagy
Other mitophagy associated proteins
109294321 (SMURF1)
Ubiquitin system [BR:
ggn04121
]
Ubiquitin ligases (E3)
HECT type E3
109294321 (SMURF1)
Mitochondrial biogenesis [BR:
ggn03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
109294321 (SMURF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WW
C2
DUF7350
Motif
Other DBs
NCBI-GeneID:
109294321
NCBI-ProteinID:
XP_019368167
LinkDB
All DBs
Position
Unknown
AA seq
732 aa
AA seq
DB search
MSTPGTRRSGSSIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDP
KWNQHYDLYVGKTDSITISVWNHKKIHKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCK
LNPTDTDAVRGQIVVSLQTRDRIGTGGSVVDCRGLLENEGTVYEDSGPGRPLSCFMEEPA
PYTDTTGAAGGGNCRFVESPSQDQRLQAQRLRNPEIRGPVQTPQNRPHGHQSPDLPEGYE
QRTTVQGQVYFLHTQTGVSTWHDPRIPRDLNSVNCDELGPLPPGWEVRSTVSGRIYFVDH
NNRTTQFTDPRLHHIMNHQCQLKEPSQQPLPVPNEGSLEDGEELPAQRYERDLVQKLKVL
RHELSLQQPQAGHCRIEVSREEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDYGGVAR
EWLYLLCHEMLNPYYGLFQYSTDNIYTLQINADSSINPDHLSYFHFVGRIMGLAVFHGHY
INGGFTVPFYKQLLGKPIQLSDLESVDPELHKSLVWILENDITPVLDHTFCVEHNAFGRI
LQHELKPNGRNIPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLLKPFDQ
KELELIIGGLDKIDLNDWKSNTRLKHCMADSNIVKWFWQAVETFDEERRARLLQFVTGST
RVPLQGFKALQGSTGAAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYEKLYEKLL
TAVEETCGFAVE
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccccggggacgcggcggagcggctccagcatcaagatccggctgacagtatta
tgtgccaagaaccttgcaaagaaagatttcttcagacttcctgacccatttgcaaaaata
gtagtagatgggtcaggccagtgccattcaactgacactgtgaagaacacgttggacccc
aaatggaaccagcattacgatctatatgttgggaaaacggattccataactatcagcgta
tggaaccacaagaaaatccacaagaaacagggagctggcttcctggggtgtgtccgactc
ctctccaacgccatcagccgactaaaagatactggataccagcgtttggatctatgcaaa
ctaaatcccacagataccgatgcagtacgaggccaaatagtggtcagtttacaaacacga
gacaggataggcacaggaggttctgttgtagattgccgagggctgctggaaaatgaagga
acagtttatgaagattctggacctggaaggccactgagctgttttatggaggaaccagca
ccatacacagatactactggtgcggctggtggtgggaattgtcggttcgtagaatccccc
agtcaggatcagaggcttcaggcacaacgacttcgaaatcctgaaatcagaggtcctgtc
caaacacctcagaatagaccacacggtcatcagtcacctgacctacccgaaggctatgaa
caaaggacaacggtacagggacaagtttattttttgcacacgcagactggagttagcaca
tggcatgaccccaggataccaagggaccttaacagtgtcaactgtgacgaactaggacct
ctgccgccaggctgggaagttagaagtacagtgtctggaagaatatattttgtagatcat
aataacagaaccacacagttcacagacccaagattacatcacatcatgaaccatcaatgc
caactgaaagagcccagccagcagcctttgcctgtcccaaatgaggggtcattagaagat
ggtgaggagttacctgcacaaagatatgaaagggacttggtacagaagctaaaagtcctt
agacatgaactctctcttcagcaaccccaagctggtcactgccgcattgaagtgtccagg
gaagaaatctttgaggagtcatatcgtcagataatgaagatgaggccaaaagacttaaaa
aagaggctcatggtgaaatttcgaggcgaggagggattggactatggaggagtggcaaga
gaatggttgtatttactgtgccatgaaatgctgaatccctattatggactcttccaatac
tctacagacaatatttacacgctgcaaatcaatgcagactcttctatcaatcctgatcat
ttgtcttatttccattttgttggtcggataatgggtttggctgtgttccatggacactac
atcaatgggggtttcacagttcccttctacaaacagctgctagggaaacccattcagctg
tctgatctagaatctgttgacccagaactacataagagtttagtttggattttagagaat
gacatcaccccagtgctggaccatactttctgtgtagagcacaatgcttttgggcgtatt
ctacaacatgagctcaaaccaaatggcagaaatatcccagttacagaagagaacaagaaa
gaatatgtcaggttgtacgtaaactggcgatttatgagaggaattgaggcgcagttcctg
gctctccagaagggttttaatgaacttattcctcaacatcttctaaagccttttgaccag
aaggaacttgagctaataataggtggcttggataaaatagacctaaatgactggaagtca
aatacacggctgaagcactgcatggcagatagcaatatcgtaaagtggttctggcaagca
gtggaaacatttgatgaggaaagaagggcaaggctgttgcagtttgtgactgggtccaca
cgtgtcccgcttcaaggtttcaaggctttacaaggttctacaggcgctgcaggaccaagg
ttgtttaccatccacttgatagatgcaaatacagacaacctcccaaaagcccatacttgt
tttaaccgaattgacattccgccttacgagtcatatgagaagctttacgagaagctgttg
acagctgtggaagagacatgtgggtttgctgtggagtga
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