Gavialis gangeticus (Gharial): 109294328
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Entry
109294328 CDS
T07453
Symbol
CPSF4
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4 isoform X1
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109294328 (CPSF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ggn03021
]
109294328 (CPSF4)
03019 Messenger RNA biogenesis [BR:
ggn03019
]
109294328 (CPSF4)
Transcription machinery [BR:
ggn03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
109294328 (CPSF4)
Messenger RNA biogenesis [BR:
ggn03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
109294328 (CPSF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_3
Torus
zf-CCCH_2
zf-CCCH_12
zf-CCHC
zf-CCCH_4
zf-CCCH_RBM22
zf-CCCH_DUS3L
zf-C3H1
GAF_PdtaS
Nab2-like_zf-CCCH_
Motif
Other DBs
NCBI-GeneID:
109294328
NCBI-ProteinID:
XP_019368175
LinkDB
All DBs
Position
Unknown
AA seq
269 aa
AA seq
DB search
MQELIASVDHIKFDLEMAVEQQLGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHI
SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
IKDCPWYDRGFCKHGPLCRHRHTRRVICVNYLVGFCPEGPTCKFMHPRFELPMGTTEQPP
LPQPTQTQQKQNNNPPLQRSSSLIQLTSQNSSPNQQRTPQVIGVMQSQNNNAGNRGPRPL
EQVTCYKCGEKGHYANRCTKGHLAFLSGQ
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcaggagcttatcgccagcgtggaccacatcaagttcgacctggagatggcggtggag
cagcagctgggcgcgcagcccctgcccttccccggcatggacaaatcaggggctgccgtc
tgtgaattttttttaaaagctgcctgcggaaaaggaggcatgtgccccttccgacacatc
agcggggaaaagacagttgtttgcaaacactggctgcgagggctgtgcaaaaagggagac
cagtgcgagttcctgcatgaatatgacatgaccaagatgcccgagtgttatttttactcc
aaattcggggaatgcagtaacaaggaatgtcctttcttgcatatcgacccagagtctaaa
atcaaagactgtccttggtatgacagaggcttctgcaaacatggtcccctctgcagacat
cgacacactcgacgggtcatttgtgtgaattacctggtgggattctgccccgagggtccc
acttgcaaattcatgcaccctcgatttgaactgcctatgggaacaacagaacaaccgcca
ctgccccagccaacacaaacgcagcaaaagcaaaataacaatccgccattacaaaggtca
tcatccttgatccagttaacgagtcagaactcttctcccaaccagcagaggaccccacaa
gtcatcggagtcatgcagtctcaaaacaacaacgcggggaacagaggtccccggccgctg
gagcaggtcacctgttacaagtgtggtgagaaaggacattacgccaacagatgcaccaaa
ggacatctagcctttctcagtggacagtga
DBGET
integrated database retrieval system
