Gavialis gangeticus (Gharial): 109294352
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Entry
109294352 CDS
T07453
Symbol
RAI1
Name
(RefSeq) retinoic acid-induced protein 1
KO
K19749
retinoic acid-induced protein 1
Organism
ggn
Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ggn03000
]
109294352 (RAI1)
Transcription factors [BR:
ggn03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
109294352 (RAI1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
109294352
NCBI-ProteinID:
XP_019368203
LinkDB
All DBs
Position
Unknown
AA seq
1936 aa
AA seq
DB search
MQSFRERCGFHGNQQNYQQTSQDTSRLENYRHQSQAGPNCERQRLVAKEYYNQQQLPYPG
YENSAVEKYHRGNKQLPGQQLQGRPSFSNYAVQENSPYPARYSGEESLQAWGAQPQALAG
GVAKYEENLMKKTPAPPGSRQYHEQASQLPFRTHSLHLQQQPALTYPKLPRQKIQNDVSS
PMPFSQSPHFTQSFPASSTYSSVPGGSQSAHSYKSCTAPSGQPQHERPLGNAANLASGQR
VQNLHGYQANRMSYDQQQQQQQQQQQQQQQQQPQPQPQPQQQPQPQPSLQGRHHAQETLH
YQNLAKYQHYSQPGQTYCQGDAPPVRTPEQYYQTFSPSSSHSPARSVGRSPSYSSTPSPL
MPNLENFQYSQQSLSAGTFPAGITDHSHFMPLLNPSPTDGTSPEAQPGNCKSLQKEKIPE
NLLSDLSLQSLTALTSQVENISNTVQQLLLSKSSMAQKKGIKNPPRTPEQLKGQHCSPES
STYSAEQVGTPLSDPLSTPQSVHAETQDADYLSGSEDQLERSFLYCGQGRSPARVNSNSK
AKPESVSTCSVTSPDDMSTKSDDSFQSIHANLPLETFTKFVANERECPRLLLSALSQEEL
ASEIIVLQDAINEKVDKAWADSPSLSKEATKSPFHLENHRTCLDSMVKGPWPSQGDSSTL
TESLKLDKASGGNNGKDFSEEVYETPSVEFAAAETKNTLKDAGSLAYNSKPSIPAATSSS
GAASYSCYSNTTANSVGSESTMEHFDWPDESLGESCLRWKDLGSSLQSSDLSKGLFHSKL
AGSCKEKKNACSMEMCDGEQPAKNEQAKDFSQQELGEEEEETLTYDEATKADNERWLEDT
RHCCSGGDFSEIPMISSPDLKESDLEPEEYSSLCELASSEQKSMIYDTSPPKPPENATVL
SSSDVPVSAEETVSTVEKESSAPSSRLSGQSVILLGPAVGTETKVKSWFESSLSHIKPED
EAVGSEDTLQGKAEPEMPLSVKVKKQVAPENLLIKSEPTLRAKSLRSKRVHCRLLEREDS
GKLGPSLIKDIPAAGMVGSTCVGPESQLETPSKNAHGQTPRFPAEGLPARMCTRSFTALT
EPRTPAPLEGLKASDHQEKLGKKSACAIKQRAAFKARKRSGKPAPKGVQNPSDLAPVLVP
NLVQNEDLVGQKPKDLEAPETEVKDQRSMILRSRTKTQEVFYTKRRRERRTVEVRLKNCK
ASKKLLSNNHLPPAFKLASQGSPHKEDKVGKRMKLPKPGAGMGSKMSERPLHSLKRKSTF
LSPIPAKKRNLVLRSNSSGTKDEKPDTSPSLFKRMPSAKKAKAKLPTKSPCEAVLKPPPA
KETPDVCIKITSRAAFQGATKTKVLPPRKGRGLKLEAIVQKITSPNLKKFACKTAAAAAA
ATTARRSPLSPSAAEKERALKHGSVTPAVGEARPLSQGMAQKSPAASVAEQLCRNSNNRS
LKGKLMNGKKLSSDCFRGEACLSPEPAQHGGSMAAKSLGLLPKKRSRKGKAAALGLAKNP
LDKRAPLAPPLLLTARERAAAGNTLGNGEEGQREGKKPKSEDKDFANSEGPEGRAAPGQA
RAPKQRANHSNYNGYSKRQRKRLARGKAKSVASRCKSRGKRRRQQQQAPLLHPTEPEIRL
KYISCKRLRTDSRALPFSPYVRVEKHDEFTTTCTVINSPGDEARLQKEQHRSSAAQALPP
SGAVPQPRAALPSSSTMHLGPVVSKTLNATCLVCCVCRNPANYKDLGDLCGPYYPEDCLP
KKKSRLKDKIKAEGPSDEAPLPLPAERVLKATDNCPASAAAGKVPRLDSAADSAKQSALR
SSSRGMFRKLQSCYCCDERTEGEEAAEKPKRHECSKPESPAQEPAGDTQEHWVHEACAIW
TAGVFLVAGKLYGLQEAIKAAAEVKCSSCQQTGATVGCCHKGCAQTYHYACAIDAGCLLT
EESFSLKCPKHKRHPL
NT seq
5811 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcctttcgagaaaggtgtggtttccatggcaaccagcagaactaccagcagact
tcacaagatacatcacgcctggagaattacaggcatcaaagtcaggcagggccgaactgc
gagcgtcagaggctggtggcgaaagagtactacaatcagcagcagctgccgtacccgggg
tacgagaacagcgccgtggagaagtatcaccggggaaataagcaattacctggccagcag
ctgcaaggcaggccgtccttttcgaattacgccgtccaagagaacagcccgtacccggcc
cgctactccggggaggagagcctgcaggcctggggggcccagccgcaggccctagccgga
ggggtggcgaagtatgaggagaacttgatgaaaaagacaccggctcccccgggcagccgg
cagtaccacgagcaggcgtcgcagctgccattcaggactcactccctgcacctccagcag
cagcccgccctgacctaccccaagctgccgaggcagaagatccaaaatgacgtctcctca
cccatgcccttctcccaaagcccccacttcacccagtccttcccggcctcctccacgtac
tcgtccgtgcccggcgggagccagtcggctcactcctacaagagctgcaccgcgccctcc
ggccagccgcagcacgagaggccgctgggcaatgccgccaacctggcctccgggcagcgg
gtgcagaacctgcatggctatcaggccaaccggatgagctatgaccagcagcagcagcag
cagcagcagcagcagcaacagcagcagcagcagcagccgcagccgcagccgcagccacag
cagcagccgcagccccagccttccctgcaaggaagacatcatgcccaggaaaccctccat
taccagaacctggccaagtaccaacattacagccagcccggccagacctactgccagggc
gacgcaccgcctgtgaggacgccggagcagtactaccagaccttcagccccagctcgagc
cattccccggcgcgctctgtcgggcggtctccgtcctacagctccacgccgtcccccctg
atgcccaacctagagaacttccagtacagccagcagtccctcagcgccgggacgttccct
gccggcatcacagaccacagccacttcatgccgttgctcaacccttctccgacagatggg
acgagtccagaggctcagcccgggaactgcaaaagcttgcaaaaggagaagatccccgag
aacctgctgtccgacctcagcttgcagagcctgacggcgctcacctcgcaggtggaaaac
atttccaacaccgtccagcagcttctcctgtccaagtcgtccatggcccagaagaaaggc
atcaagaaccctcctcggacgccggagcagctcaaagggcagcactgcagccctgagagc
agcacgtactctgctgaacaggtggggacgcccctgtcagaccctctcagcaccccacag
tctgtccatgctgaaacccaggatgccgattacctgagtgggtctgaagaccaactggag
agaagtttcctctactgcggacagggccgcagcccggccagagtcaacagcaactccaag
gccaagcccgaatccgtgtccacctgctccgtgacgtccccggatgacatgtccacaaag
tccgacgattccttccagagcatccacgccaacctgcccctggagaccttcaccaagttt
gtggccaatgaaagggagtgcccgcggctgctcctgagcgcactctcgcaggaggagctg
gcgtctgagatcatcgtcttgcaagacgcgatcaatgagaaggtggacaaggcttgggct
gactcccccagcttgagcaaggaagcgactaagtccccctttcatttagaaaaccacagg
acatgcctggactcaatggtaaagggcccgtggcccagccaaggggactcaagcaccctc
actgaatccctgaagttagacaaagcctccggtgggaacaacggcaaggacttcagtgag
gaggtttacgagactccctcggtggagttcgcagccgcagaaacaaagaacaccctcaaa
gacgcggggtccttggcatacaactccaagcccagcatcccagctgctacttccagctcc
ggggctgccagctacagctgctactccaacaccaccgccaactcggtgggctctgaaagc
accatggagcattttgactggccagatgaaagcctcggcgaatcctgcctgaggtggaaa
gacctggggtcaagcctgcaatcgtcagacctttccaagggcttattccacagcaaattg
gctgggtcttgcaaggagaaaaaaaatgcctgcagcatggagatgtgcgatggcgaacag
ccagccaagaatgagcaagcgaaggatttcagccagcaggagctgggggaggaagaggaa
gagacgttgacgtatgacgaggccaccaaagcagataatgagagatggctggaagacacc
aggcactgctgttcaggtggggacttcagcgagattcccatgatatcgtctccggatctg
aaggagtccgacttggagcccgaagaatactcctcgctgtgcgagctggcgagttcggag
cagaagtccatgatctatgacacgtccccgccgaaaccccccgagaacgcgactgtgctc
tcttccagcgatgtgcccgtgtcggccgaagagacggtgagcacggtggagaaagagagc
tccgctccttcctctcggttgtccggccagtccgtgatcctcctcggcccagccgttggc
accgaaaccaaggtgaagagttggtttgaatcttccctctctcacatcaaacctgaggat
gaagctgtggggagcgaggacactctccagggaaaggcagaacctgaaatgcccttgtcg
gtcaaggtcaagaagcaagtggcccctgaaaatctgctgataaaatcagagccgaccttg
agggccaaaagcttacggagcaagagggtccactgcaggctgttggagagagaggactct
ggtaagctggggcccagcctaatcaaagacatcccagcggctggcatggtgggcagcacg
tgtgttgggccagagagccagctcgagacaccaagcaaaaatgcccatggccagactcct
cggtttccagcggagggcttgccagcaaggatgtgtacccgctctttcactgctttgacg
gagcccaggacgccagcccctctggaagggctgaaagcctctgaccatcaggaaaagttg
gggaagaaatcggcttgtgccattaagcagagagctgccttcaaggccaggaagcgctct
gggaagccagcccccaaaggtgtccaaaatcccagcgatctggctccagtcctggtccca
aacctagtgcagaacgaggacttggtcggccagaagcctaaagacctggaggctccagag
accgaggtgaaggatcagagatccatgatcctccggtcccggacaaagacgcaggaggtc
ttctacaccaagcggaggcgggagcggaggaccgtggaggtccggctcaaaaactgtaag
gcgtccaagaagctcctttccaacaaccacctcccacctgccttcaagttggcgtcccag
ggcagcccgcacaaggaggacaaggtaggcaagagaatgaagctccccaagccgggggct
ggcatgggcagcaagatgtctgagcggccgctgcattccctgaagagaaaatccaccttc
ctctcccccatcccggccaagaagaggaacttggttttacggagcaacagcagtggcacc
aaggatgagaagcctgacacctcccccagcttgttcaaacggatgccgtccgccaagaag
gcaaaggccaaactgcccaccaagagcccctgcgaggccgtcctgaagccccctccggcc
aaagagacccctgacgtctgcattaaaatcacctcccgggccgcctttcagggggccacg
aagacgaaagtcctgcctccgcggaagggcaggggcctcaagctggaggccatcgtgcag
aagatcacgtctcccaacctgaagaagtttgcctgcaaaactgccgccgccgccgctgcc
gccactaccgctcgccgcagccctctgagcccctccgccgcagagaaggagcgggccttg
aagcatgggagcgtaaccccagcggtgggagaagccaggccattgagccagggcatggca
caaaagtctcctgccgcttcagtagcagagcaattatgcagaaattcgaacaacagatcc
ttaaaagggaaactaatgaacggcaagaaactgtcctccgactgcttcaggggtgaggcc
tgcttgtctcccgagccggcacagcacggtggcagcatggccgccaagagcctcggcttg
ctgcccaagaagaggagccggaaggggaaagccgcagcccttggcctggccaagaacccc
ctggacaagcgggctccccttgcccctcctttgctcctgacagcccgggagcgggcggcc
gcggggaacacgctgggcaatggggaagagggacaaagggaggggaagaagccaaagagc
gaggacaaagactttgcaaacagcgaaggccccgaggggagagctgccccgggccaggcc
cgggcgccgaagcagcgagccaaccactccaactacaatggctactccaagcggcagagg
aagcggctcgcccggggcaaggccaagagcgtggcgtcgcggtgtaagagcaggggcaag
cggcggcggcagcagcagcaggcccctctgctccaccccacggagccggagatccgcctg
aagtacatctcgtgcaagcggctgcggacagacagccgggcgctgcccttctccccgtac
gtgcgcgtggagaagcacgacgagttcaccactacctgcaccgtcatcaactcccccggg
gacgaggccaggcttcagaaggagcagcaccgctcgtccgcggcccaggccctgcctccc
agcggggccgtgccgcagccccgagcggcgctgccctcgtcttccaccatgcacctgggc
cccgtggtgtccaagacgctcaacgccacctgcctggtgtgctgcgtctgccgaaaccca
gccaactacaaagacctgggggacctgtgcgggccgtactaccccgaggactgcctgccg
aagaagaagtcgaggctgaaagacaagatcaaagcggaggggccaagcgacgaggcgccc
ctgcctctgcccgccgagcgcgtgctcaaagcgacggataattgtccagcgagcgctgcc
gccggcaaggtgccgaggttggacagcgctgccgactcggccaagcagagcgccctccgg
tcgagctctagggggatgttcaggaaactacaaagctgttactgctgtgatgagaggaca
gagggcgaggaggcggcggagaagcccaagaggcacgagtgcagcaagcccgagtccccg
gctcaggagccggcgggcgacacgcaggaacactgggtccacgaggcctgtgcgatatgg
accgctggggttttcctggttgcggggaagctgtatgggctgcaggaggcgataaaggcg
gctgctgaagtgaaatgctcgagttgccagcaaacaggagcaactgttggctgctgccac
aagggatgtgcccagacctatcactacgcatgtgccatcgacgcaggttgcttattaact
gaagagagtttctctctgaaatgtcccaaacacaagaggcatcccttataa
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