KEGG   Gavialis gangeticus (Gharial): 109294352
Entry
109294352         CDS       T07453                                 
Symbol
RAI1
Name
(RefSeq) retinoic acid-induced protein 1
  KO
K19749  retinoic acid-induced protein 1
Organism
ggn  Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:ggn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ggn03000]
    109294352 (RAI1)
Transcription factors [BR:ggn03000]
 Eukaryotic type
  Zinc finger
   Other zinc fingers
    109294352 (RAI1)
SSDB
Motif
Pfam: zf-HC5HC2H zf-HC5HC2H_2
Other DBs
NCBI-GeneID: 109294352
NCBI-ProteinID: XP_019368203
LinkDB
Position
Unknown
AA seq 1936 aa
MQSFRERCGFHGNQQNYQQTSQDTSRLENYRHQSQAGPNCERQRLVAKEYYNQQQLPYPG
YENSAVEKYHRGNKQLPGQQLQGRPSFSNYAVQENSPYPARYSGEESLQAWGAQPQALAG
GVAKYEENLMKKTPAPPGSRQYHEQASQLPFRTHSLHLQQQPALTYPKLPRQKIQNDVSS
PMPFSQSPHFTQSFPASSTYSSVPGGSQSAHSYKSCTAPSGQPQHERPLGNAANLASGQR
VQNLHGYQANRMSYDQQQQQQQQQQQQQQQQQPQPQPQPQQQPQPQPSLQGRHHAQETLH
YQNLAKYQHYSQPGQTYCQGDAPPVRTPEQYYQTFSPSSSHSPARSVGRSPSYSSTPSPL
MPNLENFQYSQQSLSAGTFPAGITDHSHFMPLLNPSPTDGTSPEAQPGNCKSLQKEKIPE
NLLSDLSLQSLTALTSQVENISNTVQQLLLSKSSMAQKKGIKNPPRTPEQLKGQHCSPES
STYSAEQVGTPLSDPLSTPQSVHAETQDADYLSGSEDQLERSFLYCGQGRSPARVNSNSK
AKPESVSTCSVTSPDDMSTKSDDSFQSIHANLPLETFTKFVANERECPRLLLSALSQEEL
ASEIIVLQDAINEKVDKAWADSPSLSKEATKSPFHLENHRTCLDSMVKGPWPSQGDSSTL
TESLKLDKASGGNNGKDFSEEVYETPSVEFAAAETKNTLKDAGSLAYNSKPSIPAATSSS
GAASYSCYSNTTANSVGSESTMEHFDWPDESLGESCLRWKDLGSSLQSSDLSKGLFHSKL
AGSCKEKKNACSMEMCDGEQPAKNEQAKDFSQQELGEEEEETLTYDEATKADNERWLEDT
RHCCSGGDFSEIPMISSPDLKESDLEPEEYSSLCELASSEQKSMIYDTSPPKPPENATVL
SSSDVPVSAEETVSTVEKESSAPSSRLSGQSVILLGPAVGTETKVKSWFESSLSHIKPED
EAVGSEDTLQGKAEPEMPLSVKVKKQVAPENLLIKSEPTLRAKSLRSKRVHCRLLEREDS
GKLGPSLIKDIPAAGMVGSTCVGPESQLETPSKNAHGQTPRFPAEGLPARMCTRSFTALT
EPRTPAPLEGLKASDHQEKLGKKSACAIKQRAAFKARKRSGKPAPKGVQNPSDLAPVLVP
NLVQNEDLVGQKPKDLEAPETEVKDQRSMILRSRTKTQEVFYTKRRRERRTVEVRLKNCK
ASKKLLSNNHLPPAFKLASQGSPHKEDKVGKRMKLPKPGAGMGSKMSERPLHSLKRKSTF
LSPIPAKKRNLVLRSNSSGTKDEKPDTSPSLFKRMPSAKKAKAKLPTKSPCEAVLKPPPA
KETPDVCIKITSRAAFQGATKTKVLPPRKGRGLKLEAIVQKITSPNLKKFACKTAAAAAA
ATTARRSPLSPSAAEKERALKHGSVTPAVGEARPLSQGMAQKSPAASVAEQLCRNSNNRS
LKGKLMNGKKLSSDCFRGEACLSPEPAQHGGSMAAKSLGLLPKKRSRKGKAAALGLAKNP
LDKRAPLAPPLLLTARERAAAGNTLGNGEEGQREGKKPKSEDKDFANSEGPEGRAAPGQA
RAPKQRANHSNYNGYSKRQRKRLARGKAKSVASRCKSRGKRRRQQQQAPLLHPTEPEIRL
KYISCKRLRTDSRALPFSPYVRVEKHDEFTTTCTVINSPGDEARLQKEQHRSSAAQALPP
SGAVPQPRAALPSSSTMHLGPVVSKTLNATCLVCCVCRNPANYKDLGDLCGPYYPEDCLP
KKKSRLKDKIKAEGPSDEAPLPLPAERVLKATDNCPASAAAGKVPRLDSAADSAKQSALR
SSSRGMFRKLQSCYCCDERTEGEEAAEKPKRHECSKPESPAQEPAGDTQEHWVHEACAIW
TAGVFLVAGKLYGLQEAIKAAAEVKCSSCQQTGATVGCCHKGCAQTYHYACAIDAGCLLT
EESFSLKCPKHKRHPL
NT seq 5811 nt   +upstreamnt  +downstreamnt
atgcagtcctttcgagaaaggtgtggtttccatggcaaccagcagaactaccagcagact
tcacaagatacatcacgcctggagaattacaggcatcaaagtcaggcagggccgaactgc
gagcgtcagaggctggtggcgaaagagtactacaatcagcagcagctgccgtacccgggg
tacgagaacagcgccgtggagaagtatcaccggggaaataagcaattacctggccagcag
ctgcaaggcaggccgtccttttcgaattacgccgtccaagagaacagcccgtacccggcc
cgctactccggggaggagagcctgcaggcctggggggcccagccgcaggccctagccgga
ggggtggcgaagtatgaggagaacttgatgaaaaagacaccggctcccccgggcagccgg
cagtaccacgagcaggcgtcgcagctgccattcaggactcactccctgcacctccagcag
cagcccgccctgacctaccccaagctgccgaggcagaagatccaaaatgacgtctcctca
cccatgcccttctcccaaagcccccacttcacccagtccttcccggcctcctccacgtac
tcgtccgtgcccggcgggagccagtcggctcactcctacaagagctgcaccgcgccctcc
ggccagccgcagcacgagaggccgctgggcaatgccgccaacctggcctccgggcagcgg
gtgcagaacctgcatggctatcaggccaaccggatgagctatgaccagcagcagcagcag
cagcagcagcagcagcaacagcagcagcagcagcagccgcagccgcagccgcagccacag
cagcagccgcagccccagccttccctgcaaggaagacatcatgcccaggaaaccctccat
taccagaacctggccaagtaccaacattacagccagcccggccagacctactgccagggc
gacgcaccgcctgtgaggacgccggagcagtactaccagaccttcagccccagctcgagc
cattccccggcgcgctctgtcgggcggtctccgtcctacagctccacgccgtcccccctg
atgcccaacctagagaacttccagtacagccagcagtccctcagcgccgggacgttccct
gccggcatcacagaccacagccacttcatgccgttgctcaacccttctccgacagatggg
acgagtccagaggctcagcccgggaactgcaaaagcttgcaaaaggagaagatccccgag
aacctgctgtccgacctcagcttgcagagcctgacggcgctcacctcgcaggtggaaaac
atttccaacaccgtccagcagcttctcctgtccaagtcgtccatggcccagaagaaaggc
atcaagaaccctcctcggacgccggagcagctcaaagggcagcactgcagccctgagagc
agcacgtactctgctgaacaggtggggacgcccctgtcagaccctctcagcaccccacag
tctgtccatgctgaaacccaggatgccgattacctgagtgggtctgaagaccaactggag
agaagtttcctctactgcggacagggccgcagcccggccagagtcaacagcaactccaag
gccaagcccgaatccgtgtccacctgctccgtgacgtccccggatgacatgtccacaaag
tccgacgattccttccagagcatccacgccaacctgcccctggagaccttcaccaagttt
gtggccaatgaaagggagtgcccgcggctgctcctgagcgcactctcgcaggaggagctg
gcgtctgagatcatcgtcttgcaagacgcgatcaatgagaaggtggacaaggcttgggct
gactcccccagcttgagcaaggaagcgactaagtccccctttcatttagaaaaccacagg
acatgcctggactcaatggtaaagggcccgtggcccagccaaggggactcaagcaccctc
actgaatccctgaagttagacaaagcctccggtgggaacaacggcaaggacttcagtgag
gaggtttacgagactccctcggtggagttcgcagccgcagaaacaaagaacaccctcaaa
gacgcggggtccttggcatacaactccaagcccagcatcccagctgctacttccagctcc
ggggctgccagctacagctgctactccaacaccaccgccaactcggtgggctctgaaagc
accatggagcattttgactggccagatgaaagcctcggcgaatcctgcctgaggtggaaa
gacctggggtcaagcctgcaatcgtcagacctttccaagggcttattccacagcaaattg
gctgggtcttgcaaggagaaaaaaaatgcctgcagcatggagatgtgcgatggcgaacag
ccagccaagaatgagcaagcgaaggatttcagccagcaggagctgggggaggaagaggaa
gagacgttgacgtatgacgaggccaccaaagcagataatgagagatggctggaagacacc
aggcactgctgttcaggtggggacttcagcgagattcccatgatatcgtctccggatctg
aaggagtccgacttggagcccgaagaatactcctcgctgtgcgagctggcgagttcggag
cagaagtccatgatctatgacacgtccccgccgaaaccccccgagaacgcgactgtgctc
tcttccagcgatgtgcccgtgtcggccgaagagacggtgagcacggtggagaaagagagc
tccgctccttcctctcggttgtccggccagtccgtgatcctcctcggcccagccgttggc
accgaaaccaaggtgaagagttggtttgaatcttccctctctcacatcaaacctgaggat
gaagctgtggggagcgaggacactctccagggaaaggcagaacctgaaatgcccttgtcg
gtcaaggtcaagaagcaagtggcccctgaaaatctgctgataaaatcagagccgaccttg
agggccaaaagcttacggagcaagagggtccactgcaggctgttggagagagaggactct
ggtaagctggggcccagcctaatcaaagacatcccagcggctggcatggtgggcagcacg
tgtgttgggccagagagccagctcgagacaccaagcaaaaatgcccatggccagactcct
cggtttccagcggagggcttgccagcaaggatgtgtacccgctctttcactgctttgacg
gagcccaggacgccagcccctctggaagggctgaaagcctctgaccatcaggaaaagttg
gggaagaaatcggcttgtgccattaagcagagagctgccttcaaggccaggaagcgctct
gggaagccagcccccaaaggtgtccaaaatcccagcgatctggctccagtcctggtccca
aacctagtgcagaacgaggacttggtcggccagaagcctaaagacctggaggctccagag
accgaggtgaaggatcagagatccatgatcctccggtcccggacaaagacgcaggaggtc
ttctacaccaagcggaggcgggagcggaggaccgtggaggtccggctcaaaaactgtaag
gcgtccaagaagctcctttccaacaaccacctcccacctgccttcaagttggcgtcccag
ggcagcccgcacaaggaggacaaggtaggcaagagaatgaagctccccaagccgggggct
ggcatgggcagcaagatgtctgagcggccgctgcattccctgaagagaaaatccaccttc
ctctcccccatcccggccaagaagaggaacttggttttacggagcaacagcagtggcacc
aaggatgagaagcctgacacctcccccagcttgttcaaacggatgccgtccgccaagaag
gcaaaggccaaactgcccaccaagagcccctgcgaggccgtcctgaagccccctccggcc
aaagagacccctgacgtctgcattaaaatcacctcccgggccgcctttcagggggccacg
aagacgaaagtcctgcctccgcggaagggcaggggcctcaagctggaggccatcgtgcag
aagatcacgtctcccaacctgaagaagtttgcctgcaaaactgccgccgccgccgctgcc
gccactaccgctcgccgcagccctctgagcccctccgccgcagagaaggagcgggccttg
aagcatgggagcgtaaccccagcggtgggagaagccaggccattgagccagggcatggca
caaaagtctcctgccgcttcagtagcagagcaattatgcagaaattcgaacaacagatcc
ttaaaagggaaactaatgaacggcaagaaactgtcctccgactgcttcaggggtgaggcc
tgcttgtctcccgagccggcacagcacggtggcagcatggccgccaagagcctcggcttg
ctgcccaagaagaggagccggaaggggaaagccgcagcccttggcctggccaagaacccc
ctggacaagcgggctccccttgcccctcctttgctcctgacagcccgggagcgggcggcc
gcggggaacacgctgggcaatggggaagagggacaaagggaggggaagaagccaaagagc
gaggacaaagactttgcaaacagcgaaggccccgaggggagagctgccccgggccaggcc
cgggcgccgaagcagcgagccaaccactccaactacaatggctactccaagcggcagagg
aagcggctcgcccggggcaaggccaagagcgtggcgtcgcggtgtaagagcaggggcaag
cggcggcggcagcagcagcaggcccctctgctccaccccacggagccggagatccgcctg
aagtacatctcgtgcaagcggctgcggacagacagccgggcgctgcccttctccccgtac
gtgcgcgtggagaagcacgacgagttcaccactacctgcaccgtcatcaactcccccggg
gacgaggccaggcttcagaaggagcagcaccgctcgtccgcggcccaggccctgcctccc
agcggggccgtgccgcagccccgagcggcgctgccctcgtcttccaccatgcacctgggc
cccgtggtgtccaagacgctcaacgccacctgcctggtgtgctgcgtctgccgaaaccca
gccaactacaaagacctgggggacctgtgcgggccgtactaccccgaggactgcctgccg
aagaagaagtcgaggctgaaagacaagatcaaagcggaggggccaagcgacgaggcgccc
ctgcctctgcccgccgagcgcgtgctcaaagcgacggataattgtccagcgagcgctgcc
gccggcaaggtgccgaggttggacagcgctgccgactcggccaagcagagcgccctccgg
tcgagctctagggggatgttcaggaaactacaaagctgttactgctgtgatgagaggaca
gagggcgaggaggcggcggagaagcccaagaggcacgagtgcagcaagcccgagtccccg
gctcaggagccggcgggcgacacgcaggaacactgggtccacgaggcctgtgcgatatgg
accgctggggttttcctggttgcggggaagctgtatgggctgcaggaggcgataaaggcg
gctgctgaagtgaaatgctcgagttgccagcaaacaggagcaactgttggctgctgccac
aagggatgtgcccagacctatcactacgcatgtgccatcgacgcaggttgcttattaact
gaagagagtttctctctgaaatgtcccaaacacaagaggcatcccttataa

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