Gavialis gangeticus (Gharial): 109294359
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Entry
109294359 CDS
T07453
Symbol
TOP3A
Name
(RefSeq) DNA topoisomerase 3-alpha isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn03440
Homologous recombination
ggn03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
109294359 (TOP3A)
03460 Fanconi anemia pathway
109294359 (TOP3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ggn03032
]
109294359 (TOP3A)
03400 DNA repair and recombination proteins [BR:
ggn03400
]
109294359 (TOP3A)
Enzymes [BR:
ggn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
109294359 (TOP3A)
DNA replication proteins [BR:
ggn03032
]
Eukaryotic type
DNA Topoisomerases
109294359 (TOP3A)
DNA repair and recombination proteins [BR:
ggn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
109294359 (TOP3A)
FA (Fanconi anemia) pathway
109294359 (TOP3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
Lar_restr_allev
Motif
Other DBs
NCBI-GeneID:
109294359
NCBI-ProteinID:
XP_019368220
LinkDB
All DBs
Position
Unknown
AA seq
1020 aa
AA seq
DB search
MNRALRLVARGLGALSGPARRWSDAATMPLQRVLCVAEKNDAARGIADLLSGGRVRRREG
LSRFNKIYEYNYHLFGQDVTMVMTSVSGHLLNHEFKTAFRKWHSCNPLVLFDAEIEKYCP
ENYVDIKRTLEREIRQCQALVIWTDCDREGENIGFEIIRVCKAVMPSLQVFRARFSEITP
HAVRVACENLTQPDQNISDAVDVRQELDLRIGAAFTRFQTLRLSRIFPDVLAERLISYGS
CQFPTLGFVVERFKAIQAFVPEAFYKIKVTHKREDAIVDFSWKRNRLFNHTACLVLYQMC
MEDPVATVVMIGSKPKSKWRPLPLDTVELEKLASRKLKINAKETMRMAEKLYTQGYISYP
RTETNMFPKELSLSALVQQQTQDPNWGAFAQRILDQGGPTPRNGSKTDQAHPPIHPTKYT
CNLQGNEQRLYELIVRHFLACCSQDAKGQETTVEIDIANERFIAQGLMILARNYLDVYPY
DKWSDKVIPVYERGSRFQPTTVEMVDGETSPPQLLTEADLIALMDKHGIGTDATHAEHIE
TIKARMYVGLTPEQRFLPGHLGMGLVEGYDSMGYEMSKPNLRAELEADLKLICEGKKDKA
VVLRQQIEKYKQVFIEAVAKANKLDQALSQYFGTVREVAQGEELYPETPAAIRKCPRCNN
DMVLKTRKNGGFYLGCMGYPACKAAVWFPDFVLEVSKDDSVCAVCKPHPVQRLKFKLKQG
SAPPLLPLEFVGCIGGCDKLLRDTLDLQYLQGLPRPASAAGQADNHLQVSHSFNQMASNE
NGHRRPATNPPVGFLGPRATRLPSTAPCLAVAVAADENNAVMCNCGQAAVLLTVRKDGPN
QGRQFYKCSASSCNFFLWADQQAEDRNNAAPGGFASPASFGERSPMGFHSPEGGRGQGHY
QSSSRDAGGGGSNVCNCNQPAITRTVQKDGPNKGRQFHTCPKPWDQQCGFFLWADENVAP
GASVDFSSNHFGDQGFPRGAGSKAKRPDNFSSKGPTVKRPRTCGICHQPGHTRKTCPQNH
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgggcgctccggctggtcgctcgcggcctaggagcgctgtcggggcccgcgagg
cggtggagcgacgcggccaccatgccgctgcagcgggtgctgtgcgtggccgagaagaac
gacgcggcgcggggcatcgccgacctgctgtcgggcggccgagtgcggcggagagaaggc
ttgtccaggttcaacaagatctatgaatacaactatcatctgtttggccaggatgttact
atggtgatgacatctgtttcgggccatttgctgaatcatgagtttaagactgcatttcgc
aaatggcatagctgcaaccccctggtgctctttgacgctgagattgagaaatattgccct
gaaaactacgtggatattaagcggaccctagaacgagaaatccggcaatgccaggctctg
gtgatctggactgattgtgatcgagaaggagagaacattggctttgagatcatccgtgtc
tgcaaagctgttatgccaagccttcaagtgttccgagcccgtttttctgagatcacacca
catgctgttcgagttgcctgtgagaacctcacccagcctgatcagaacattagtgatgct
gtcgatgtcagacaggagctggatctcagaataggtgctgccttcaccagattccagacc
ctgaggctctccagaatcttccctgatgtcctggcagagcggttaatcagctatggtagc
tgccagtttccaactctgggatttgtggtagaaaggtttaaagccatacaggcctttgtt
cctgaagccttctataaaataaaagtgactcacaaacgtgaggatgccattgtggacttc
agctggaagaggaatcgactctttaaccacacagcatgccttgtcctctaccagatgtgt
atggaggatccagtagccactgttgtcatgattggtagcaaaccaaaaagcaagtggagg
cccctgcctctggacacagtggaactggagaagctggcatcccgcaaactgaaaataaat
gccaaagagaccatgagaatggcagaaaagctctatactcaagggtacataagctacccc
cgaactgagaccaacatgttccccaaagaattaagcctgtctgcactggtacagcagcag
acccaagatccaaactggggagcttttgcacaaagaattctagaccagggtgggccaaca
cctaggaatggttccaaaaccgatcaggctcacccccccattcaccccaccaaatacacc
tgtaacctgcaggggaatgagcagagactgtatgaactcatcgtgcgtcatttcttggct
tgctgctctcaagatgccaaaggacaggaaactactgtggagattgatattgccaatgag
cggtttattgctcaagggctaatgatccttgccagaaactacctggatgtgtacccatat
gacaagtggagtgacaaggtcatcccagtgtatgagagagggtctcgttttcaacctacc
acggtggagatggtggatggggagaccagcccgccccagctcctcacagaagctgatctc
attgcactcatggacaaacatggcattgggactgacgccactcatgctgagcacattgag
accatcaaggcacgaatgtatgtggggctcactccagagcagaggttccttccaggccat
ctgggcatggggctggtagaaggttacgattccatgggctacgagatgtcaaagcctaac
cttcgagctgagttggaggctgacctgaaactgatctgcgagggaaagaaagacaaggct
gtagtactgaggcagcagatagagaagtacaagcaagtcttcattgaagcagtggccaaa
gccaacaagctggaccaggctttgtctcagtactttggaacagtcagagaagtggctcaa
ggagaggagctctaccccgaaacaccagctgccatccggaaatgtcctcggtgcaacaat
gacatggtcctaaagactaggaagaatggagggttttaccttggctgcatgggatatcct
gcttgcaaagctgctgtctggtttcctgactttgtgctggaagtcagcaaggacgacagc
gtctgtgctgtgtgcaagccccatccagttcagaggctgaaatttaagctcaagcaaggg
agtgccccccctctcctgcccctggaatttgttggctgcatcggaggctgcgacaagttg
ctgagagacaccttggacctgcagtatttacaaggattgccccgacctgcatcagcagcc
ggccaggcagacaaccacctgcaagtcagccactcctttaaccaaatggctagcaatgag
aatggccacaggaggccagccacaaacccgccagttgggttcctaggacccagggccacg
aggctgcccagcactgctccttgcctggctgtagctgtagctgctgacgagaacaatgca
gtgatgtgcaactgcgggcaggcggcagtgctgctcaccgtgcggaaggatgggcccaac
caaggcaggcagttctacaagtgcagtgctagcagctgcaacttcttcctgtgggcggat
cagcaggccgaggacaggaacaatgcagcacctgggggctttgcatcgccagcttccttt
ggtgaaaggtcccctatgggcttccacagcccagaaggagggagaggccagggacactac
cagagcagcagtcgagatgctggaggagggggcagcaatgtttgcaactgcaaccagcca
gctatcacacgcacggtccagaaggatggacccaacaaagggcggcagttccacacttgc
ccaaagccctgggaccagcagtgcggcttctttctgtgggcagacgagaatgtggcccca
ggggcatctgtggacttctcttcaaaccattttggggaccaggggttcccaagaggagca
ggaagcaaagctaaaagaccagataatttctcctcgaaggggccaaccgtgaagagacca
cggacctgtgggatttgccaccagcctggtcacaccaggaagacttgtccccagaaccac
tga
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