Gavialis gangeticus (Gharial): 109294365
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Entry
109294365 CDS
T07453
Symbol
SHMT1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn00260
Glycine, serine and threonine metabolism
ggn00630
Glyoxylate and dicarboxylate metabolism
ggn00670
One carbon pool by folate
ggn01100
Metabolic pathways
ggn01200
Carbon metabolism
ggn01230
Biosynthesis of amino acids
ggn01240
Biosynthesis of cofactors
ggn04981
Folate transport and metabolism
Module
ggn_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
109294365 (SHMT1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
109294365 (SHMT1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
109294365 (SHMT1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
109294365 (SHMT1)
Enzymes [BR:
ggn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
109294365 (SHMT1)
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Paralog
GFIT
Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-GeneID:
109294365
NCBI-ProteinID:
XP_019368227
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All DBs
Position
Unknown
AA seq
485 aa
AA seq
DB search
MATSANLNGELPSAELWQSHDKMVLEPLDTNDPEVFNIIKKEKQRQRLGLELIASENFAS
RAVLEALGSCLNNKYSEGYPGQRYYGGTECVDELERLCQKRALEAYNLDPQKWGVNVQPY
SGSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMPYKVDPST
GYIDYDRLEENARLFHPKLIIAGVSCYSRNLDYARLRRIATENGAYLLADMAHISGLVAA
GVVPSPFEHCDVVSTTTHKTLRGCRAGMIFYRKGTRSVDPKTGKETPYNLESLINQAVFP
GLQGGPHNHAIAGIAVALKQAMTPEFRAYQRQVVANCKALAVALLGMGYHIVTGGSDNHL
ILVDLRSKGTDGGRAERVLEICSIACNKNTCPGDRSALRPSGLRLGTPALTSRGFQEQDF
HRVAIFIHKGIELTLRVQSDMSPKATLKEFKEHLGNEKYQGPLQALKEEVETFAATFPIP
GLPVL
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggctacctcagccaacctcaacggcgagctcccgagtgctgaactctggcagtcgcat
gacaagatggtcctggaaccgctcgataccaacgaccccgaggtgttcaacatcatcaag
aaggagaagcagcggcagaggctgggcttagagctgatcgcgtccgagaactttgccagc
cgggccgtgctggaggccctgggctcctgcctgaacaacaagtactcggaggggtaccca
gggcagaggtactacggcggcacggagtgtgtggacgagctggagaggctgtgtcagaag
cgggcactggaggcttacaacctggacccccagaagtggggcgtcaatgtccagccctac
tcagggtccccggctaactttgcagtatacacggcgctggtggagccccacggcaggatc
atgggcctggacctgcctgacggggggcacttgacccatggcttcatgaccgacaagaag
aagatctcagccacctccatcttcttcgagtccatgccctacaaggtggatcccagcacc
gggtacatcgactacgaccggctggaggagaacgcccgcttgttccaccccaagctgatc
attgcaggggtgagctgctattcgcggaacctggactacgcccgcctgcggaggattgcc
accgagaacggcgcctacctcctggccgacatggcccacatcagcgggctggtggcggct
ggtgtggtgccctcgcctttcgagcactgtgacgtggtctccaccaccacccacaagacg
ctgcggggctgccgggccggcatgattttctaccgcaaagggacacgcagcgtggacccc
aagacgggtaaggagacgccctacaacctggagagcctcatcaaccaggccgtcttcccc
gggctgcagggggggccacacaaccatgccattgcaggaatcgctgtggcactcaagcaa
gccatgacccccgagttcagagcctaccaacggcaggtggttgccaactgcaaggccttg
gccgtagcgctgcttggcatgggctaccacatcgtcactggcggctccgacaaccatctc
atcctcgtggacctgcgcagcaaaggcacggatggcggcagggccgagcgggtgctggag
atctgctccatcgcctgcaacaagaacacctgtccgggtgacaggagtgccctgcgacca
agcgggttgaggctgggcaccccggcgctgacctcccggggcttccaggaacaggacttc
catagggtagccatcttcatccacaagggcattgagctgacgctgagggtccaaagcgac
atgagtcccaaggcgacgctgaaggaattcaaagagcacctgggcaatgagaagtaccag
gggccgctgcaggccctcaaggaggaggtggagacctttgctgcgacattccccatccca
ggcctgcctgtgctttaa
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