Gavialis gangeticus (Gharial): 109294407
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Entry
109294407 CDS
T07453
Symbol
TRAF7
Name
(RefSeq) E3 ubiquitin-protein ligase TRAF7
KO
K10646
E3 ubiquitin-protein ligase TRAF7 [EC:
2.3.2.27
]
Organism
ggn
Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ggn04121
]
109294407 (TRAF7)
Enzymes [BR:
ggn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109294407 (TRAF7)
Ubiquitin system [BR:
ggn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
109294407 (TRAF7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
EIF3I
WDR55
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML_2
Beta-prop_WDR75_1st
NBCH_WD40
WD40_like
Beta-prop_IP5PC_F
zf-RING_UBOX
Beta-prop_SPT8
Beta-prop_DCAF4
zf-C3HC4
zf-C3HC4_2
zf-TRAF
Beta-prop_EIPR1
Beta-prop_IFT140_2nd
zf-C3HC4_4
Sina_ZnF
Beta-prop_IFT122_1st
Beta-prop_Nup120_160
zf-C3HC4_3
WD40_MABP1-WDR62_1st
zf-RING_5
Beta-prop_LRRK2
PKcGMP_CC
WDR90_beta-prop_4th
DUF641
MIOS_WD40
Filament
DUF16
U-box
KxDL
DUF4164
Motif
Other DBs
NCBI-GeneID:
109294407
NCBI-ProteinID:
XP_019368291
LinkDB
All DBs
Position
Unknown
AA seq
670 aa
AA seq
DB search
MSSNKSARYNRFSSGATSITTSENTNGTRMETTFGPAYSAVTTITKADGANTFKQHRRTP
SSSSTLTYSPRDEDDGMPPIGTSRQSDSAISVRSLHSESNMSLRSTFSLHEEEEEPEPLV
FAEQPSVKLCCQLCCSVFKDPVITTCGHTFCRRCALTSEKCPVDNAKLTVVVNNIAVAEQ
IGELFIHCKYGCRPAASSKPAAFEVDPRGCPFTIKLSARKDHESSCDYRPVRCPNNPSCP
PLLKMNLEAHLKECEHIKCPHSKYGCTFIGNQDTYETHLEMCKFEGLKEFLQQTDDRFHE
MQVAMAQKDQEIAFLRSMLGKLSEKIDQLEKNLELKFDVLDENQSKLSEDLMEFRRDASM
LNDELSHINARLNMGILGSYDPQQIFKCKGTFVGHQGPVWCLCVYSIGDLLFSGSSDKTI
KVWDTCTTYKCQKTLEGHDGIVLALCIQGNRLYSGSADCTIIVWDIQTLQKVNTIRAHDN
PVCTLVSSHNMLFSGSLKAIKVWDIVGTELKLKKELTGLNHWVRALVASQNYLYSGSYQT
IKIWDIRNLECVHVLQTSGGSVYSIAVTNHHIVCGTYENLIHVWDIESKEQVRTLTGHVG
TVYALAVISTPDQTKVFSASYDRSLRVWSMDNMICTQTLLRHQGSVTALAVSRGRLFSGA
VDSTVKVWTC
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgagctcaaacaagagcgctcgctacaatcgtttctccagcggcgcaacaagcatcact
acttccgagaacactaacgggacgagaatggaaaccacttttggacctgcctattctgct
gtcacgaccatcacaaaagcggatggagccaacaccttcaagcagcaccgccggacacca
tcgtcgtccagcaccctcacctattcgccccgggatgaggacgatggcatgcctccgatt
ggcacctcccggcagtctgactcggcgatctctgttcgctcgctgcactccgagtccaac
atgtccttgcgctcgacgttctcgctgcacgaggaagaggaggagccagagcccttggtg
tttgctgagcagccgtcggtgaagctttgctgccagctgtgctgcagtgtattcaaagac
ccagtcatcacgacgtgtgggcacacgttttgcagaagatgtgccttaacatctgagaag
tgccctgtggacaatgccaaactgacggtggtcgtgaacaacattgctgtggccgagcag
atcggggagctgttcatccactgcaaatatggctgccggcccgctgccagcagcaagccc
gccgccttcgaggtggacccccgcggatgcccgtttacaattaaactgagtgccaggaaa
gatcacgaaagcagctgtgactacaggccagtgcgatgccccaataaccccagctgcccg
cctctcctgaaaatgaacctggaggcacatctcaaggagtgcgagcacatcaagtgtcct
cactccaaatatgggtgcacattcattgggaaccaagacacgtacgagacgcacctggag
atgtgcaagtttgagggcctgaaggagttcctgcagcagacagatgaccgcttccacgag
atgcaggtggctatggcgcaaaaggaccaagagatcgccttcttgcgctccatgctgggc
aagctctcagagaagatcgaccagctggagaaaaacctcgagctgaagtttgatgtgctg
gatgagaaccagagcaagctgagcgaggacctgatggagttccgcagggatgcctccatg
ctaaatgacgagctctcacacatcaacgctcggctcaacatggggatcctgggctcctac
gatcctcagcagatcttcaagtgcaagggcacttttgtgggacaccagggccccgtgtgg
tgtctgtgcgtttactccattggagacttgcttttcagtggctcttcggacaaaaccatt
aaggtgtgggatacctgtaccacgtacaagtgccaaaagaccttggagggtcacgatgga
attgtactagctctctgcattcagggaaacaggttgtacagcggctcggcggactgcacc
atcattgtctgggatatccaaaccctgcagaaggtgaacaccatccgagcccacgacaat
cccgtctgcacgctggtctcctcacacaacatgctgttcagcggctccctcaaagccatc
aaggtctgggacattgtcggcactgagctgaagctgaagaaggagctgacgggtctgaac
cactgggtacgagcgctcgtggcctcgcagaactatctctacagtgggtcataccagaca
atcaagatctgggacatccggaacctggagtgcgtccacgtgctacagacatcggggggc
agcgtctactccatcgctgtgacaaaccaccacattgtgtgtggcacctacgagaacctc
atccacgtctgggatatcgagtccaaggagcaggtgcggacgctgactgggcatgtgggt
acagtgtatgccctggccgtcatctccacacccgaccagaccaaagtcttcagcgcctcc
tatgaccggtctctcagggtgtggagcatggacaacatgatctgcacgcagacgctgctg
cgccaccagggcagcgtgacggccctcgccgtctcccggggccgcctcttctccggggcc
gtggacagcacggttaaggtctggacgtgctaa
DBGET
integrated database retrieval system
