Gavialis gangeticus (Gharial): 109294461
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Entry
109294461 CDS
T07453
Symbol
TMC5
Name
(RefSeq) transmembrane channel-like protein 5 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
ggn
Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ggn02000
]
109294461 (TMC5)
03037 Cilium and associated proteins [BR:
ggn03037
]
109294461 (TMC5)
Transporters [BR:
ggn02000
]
Other transporters
Pores ion channels [TC:
1
]
109294461 (TMC5)
Cilium and associated proteins [BR:
ggn03037
]
Other cilia and associated proteins
Stereociliary proteins
109294461 (TMC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
DUF5932
z-alpha
Motif
Other DBs
NCBI-GeneID:
109294461
NCBI-ProteinID:
XP_019368380
LinkDB
All DBs
Position
Unknown
AA seq
894 aa
AA seq
DB search
MSYNYNEAFENPDYHNSETLESDRRKASQMNSMFRQNPYDSSPYDSYTDHNGRGQRQNYS
MDIPMATMQLGLEVSQSAKRWSRPDANPYGNAHINHSFQYEPDFTYTPPSTLSTVDGPFA
RRSSDASEASVVQRGNRQRAGPVFMTSSNLDGTDASAAADYEDKENQEEKIIRNLASMTT
RERIKAIQKMPKTMKEKREIRNKVLMEKTRKSVSYSTRIHCCTQCLYKIALSYRRFRNGL
SELFQSLQLWQKTLKIIGGKFGTSVLSYFVFLTWLLTFNIFSFLVNFSFITIPQLIAAGS
NNLSFTGLELLTGAGYFQQTVLYYGFYTNSTITKIENNTSYDMQLAYIFTIGIYFVICFF
SLVYSMAKSFRNNFVNPQTYSGNAGKLLCVWDFNITNDKAVRLKQKNLSTQIKEALSEGK
SEDLNLSVKQRMVHIAIHLAAWIFSLGTTAACCTCVYYLSINNLKLFMKGDGTELENQAA
TLVLPIAVSLLSLLTPFVFSLLELLEKFQYPRNQIYVTITRNVILKMSIIGILCYYWLNI
VATSATECWETLVGQDIYRLVVVDFLFCLLGSFFGEFVRRIIGTKCLKNLGVPEFDIARN
VLGLIYVQTLTWIGIFFSPLLPAIQMISFFIIFYVKKVSLMMNCQPPRKVWRASQMTTLF
IFLLFFPSFTGVLSVVAITIWRLNPSEKCGPFRGLSSIFDAVSGWIAVLAKNPGSAWVVW
IYHNLIESVHFFFILTVLIITITYLYWQIIEGRKIMVRLLHAQIINEGKDKMFLLEKLRA
LQTSTRDTPARKGASQQFKTTSSLYQPPGQLDQQRHLSLPYYLERPLEKSESTFSAESPS
TSGFQERSGFLPGGPERLQPSTNPGVSEALALAMRARQQAEWEMEDEDEEDFRS
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacaactataatgaagcctttgaaaacccagactatcacaattcagaaacattg
gagagtgacagacggaaagcttctcaaatgaattcaatgtttcgccaaaacccttatgat
tcttcgccatatgattcctatacggatcacaatgggcgagggcaaagacagaactattcc
atggatataccaatggccacaatgcagcttggcttggaggtcagccagagtgcaaaaaga
tggagcaggccagatgcaaatccatatggaaatgcacacatcaatcactcctttcaatat
gagccagactttacgtatacaccaccttctactctcagtactgtggatggcccttttgca
cgcagatcctctgatgcatctgaagctagcgtcgtgcagagagggaataggcaacgagct
ggccccgttttcatgacctcttctaaccttgacggaacagacgcaagtgcagcagcagac
tatgaagataaagaaaaccaagaagaaaagatcattagaaatcttgcaagcatgactacc
cgtgaaagaattaaagcaatccagaagatgccaaagactatgaaagaaaaaagagagatc
aggaataaagtccttatggaaaaaacaagaaaatcagtgagctacagtactcggattcac
tgttgtacacagtgtctgtacaaaattgccctgtcttatcgacgatttagaaatggcctg
tcagaactttttcagtcattacagctatggcagaagacactgaaaattattggtggcaaa
tttgggaccagtgtcctttcctattttgtgtttttaacttggctactgacttttaacatc
ttctcgttccttgtgaacttcagcttcataacaatccctcagctcatagcagcaggatca
aataatctttcattcacgggcctggagcttctcactggagctggctattttcaacaaact
gtgctctactatggtttttacacaaactctaccatcacaaaaattgaaaacaacacatct
tatgacatgcagctggcctatattttcactattgggatttattttgtcatctgcttcttt
agcttggtatacagcatggcaaaatccttccgtaataactttgttaatcctcaaacttac
tctggaaatgctgggaaacttctctgcgtctgggatttcaatataaccaatgacaaagct
gtgagactgaagcaaaaaaacctcagcacacaaatcaaggaagccctatctgaagggaag
tctgaagatctgaacctttctgtaaagcaaaggatggttcatattgctattcatctggct
gcttggattttttccttgggaacaacagctgcatgttgcacctgtgtttactacctctcc
attaacaacctaaagctgttcatgaaaggtgatggaacagagctggaaaaccaggctgcc
acccttgtgttgcctatcgccgtgtccctcctcagcctcctcacccctttcgtcttctct
ttgcttgaactcctagagaaatttcagtaccccaggaatcagatatacgtcactattacc
agaaatgttattctaaagatgtctataattggaatcctctgctactactggcttaacatt
gtggctacatcagcaacagagtgctgggaaacgttagtcggccaagatatctaccgtctt
gttgtggttgacttcctattttgcttgcttggctctttctttggagagtttgtacgaaga
attattggaaccaaatgcctcaaaaaccttggtgtgccagaatttgatattgcacgaaat
gttttaggtttgatctacgtgcaaactttaacctggattggcatcttcttttcacctctg
ctgcctgctatccaaatgatatctttctttataatattttatgtgaaaaaggtcagtctg
atgatgaattgtcaaccccctcgcaaagtctggagagcttctcaaatgacaacactcttc
atttttctgttgtttttcccttcgtttactggagtgctgtctgtggtagcgatcactatc
tggaggttgaatccttcagaaaagtgtggccctttccgaggcttgtcttccatatttgat
gcagtgtctgggtggatagccgtattggccaagaatcctggatcagcctgggtggtgtgg
atttatcataacttaattgaaagcgtgcatttcttctttatccttactgtcctcatcata
actatcacatatctttactggcagatcatagaaggaaggaagataatggtcagactctta
catgcgcaaattataaatgaaggaaaagataagatgtttttacttgagaaactccgagcc
ctgcagacatcaacacgggacacacctgcaagaaaaggagcaagtcaacagttcaaaaca
acctcatctttgtaccagccacctggacaacttgatcagcaaaggcatttatcgttgcca
tactacctagaaaggccgctggagaaaagtgagagcacttttagtgctgagtctccctct
acctctggcttccaagaaaggagtggcttcctgcctggaggtccagagcgactgcaacca
agcacaaacccaggagtttctgaagccttggcactagctatgagggccagacaacaggct
gaatgggaaatggaagatgaggatgaagaggattttagatcatga
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