Gavialis gangeticus (Gharial): 109294485
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Entry
109294485 CDS
T07453
Symbol
USP42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
ggn
Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ggn01002
]
109294485 (USP42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ggn04121
]
109294485 (USP42)
Enzymes [BR:
ggn01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
109294485 (USP42)
Peptidases and inhibitors [BR:
ggn01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
109294485 (USP42)
Ubiquitin system [BR:
ggn04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
109294485 (USP42)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
109294485
NCBI-ProteinID:
XP_019368415
LinkDB
All DBs
Position
Unknown
AA seq
1167 aa
AA seq
DB search
MTIVDKGSDSSNPISGQNQTGSSVGPPNEEMDSDSSSWGTVSSLDVPNHRISLGPVPGAT
DYSSSPVSEKPKPSAQKDQSVNDGIAPPQKVLFPAEKICLKWQQSHRVGAGLQNLGNTCF
LNSILQCLTYTPPLANYMLSYEHSKTCHEQGFCMMCIMQTHINQALSNSGSVIKPMAVIN
DLRRIAKHFRFGNQEDAHEFLRYTVDAMQKACLNGSTKLDRPTQATTLIHQIFGGYLRSR
VKCSNCKGVSDTFEPYLDIALEIKTAQSVSKALELFVKPEQLDGENCYKCSRCKKTVPAS
KRFTIHRSSNVLTISLKRFANFSGGKISKDVKYSEFLDLRPFMSQQNGEPVLYTLYAVLV
HTGFSCHAGHYFAYIKSCNAQWYQMNDSIVAITDIRTVLNQQAYMLFYIRSSDVKNGELI
YSIPGQSSPRPAISQRVVNSKQTVSGFIGPQLPPHLIKTSGHLNGTGSLKETPSSSVVCA
SNVTLTRPNSAPPSTSIQNWTINRPTIPDPSKKQKITISIHNKLPARQSLAQPNLHNSSL
ESLSKPVPSSTITNSSAVQSTSSASTMSVATKVPKQLATSEACSKAVLNGKSKLSSSTLV
PYGAESSEESDEDSKALVKENGHKKPVNGILIGSVASSLQNSCSSYQDAEKEVPQHELPK
TDRVNGDKVNGAICLDNNSKDNGLKLDDSTCQTKALKTTETFFPKMNGLHGKMCATLPSV
PEDKILESFKFSQVKTSSEEISITGTEKTDRSIPNDCCNSQSPFAASAPETISTKEGIVE
NTVAKKEEDHSDIIDQHKAKKRTLGTEEEHALEEPADKARGPKEAKVMLKETPLHIKGPA
ETVEKLGQSSLIRSDSECNSKKLSTLNVIDKCQETKHSASDYSEGQSAMDSPTKLSKVLE
SYSKENEGLNDNDKLGEDKERQKLQTHSPSKEKVCTTKKMEREHYCKKRRHSENEEKLDS
RDSRKRRTYSSERGKQDHHYKKHHDNGSKYKLMHNERSSRSSGRYPDYRSHSREQNDKDG
GWCYLPKRDGSWNRERYYQDIPRRWDKGRYYYDYYPFHAPRDNRERKFSHVDREYEKPSH
IYDPRSYKDYYYKTRWIHEPATKEREKRNFSSSKGDFHHCPAPPQHSEKYSSEKSAPTAG
ENTSSFETSCLKYEDVKDRKRRCPIGD
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgactatagttgacaagggatctgactcttcaaaccccatatctggtcagaatcaaact
ggcagctctgtgggaccccctaatgaagagatggactcagactcttccagctggggcact
gtgtcatctctggacgttccaaaccacagaatctctttgggaccagtacctggagctaca
gattattctagttcgcctgtatctgaaaaacccaagccttcagctcagaaagatcaatct
gttaacgatggcatcgctccaccacagaaggttctttttccagcagagaagatttgtctg
aagtggcaacaatcccatagagttggagctggtctccagaaccttggcaatacctgtttt
ctcaactctatcctgcaatgtttgacttacacgccccctcttgccaattacatgctttcc
tatgaacactccaagacatgtcatgagcaaggattctgcatgatgtgtataatgcaaact
cacattaaccaagccctctcaaactctggcagtgtcattaaacctatggctgttatcaat
gatcttcgacgaatagcaaaacatttccgttttggaaatcaggaagatgcgcacgaattt
ctacgttacactgttgatgctatgcagaaagcatgtttaaatgggagcaccaaattggac
agacctacccaggctactacactcatccatcaaatatttggaggctatcttagatctaga
gtaaaatgttcaaactgcaaaggagtttctgatacctttgagccataccttgatattgca
ttggagataaagactgctcagagtgtaagcaaagctctagaattgtttgtgaagcctgaa
cagctagatggtgaaaactgttacaaatgtagcaggtgtaaaaagacagttcctgcttca
aaaaggtttacaatacatcgatcttctaatgtgctcaccatatctctgaaacgatttgca
aatttcagtggtggaaagatttcaaaggatgtaaaatattctgagttcctggatcttcgc
ccatttatgtcccaacaaaatggagaaccagttctttacaccctgtatgcagtcttagta
catactggttttagctgccatgcaggacactacttcgcctacataaagagttgtaatgca
cagtggtaccagatgaatgattccattgtagccatcactgatatcagaactgtcctgaat
cagcaagcttacatgcttttttatatcaggtcctctgatgtgaaaaatggagaactcatt
tattccattccaggacagtcttctccccgtccagctatcagtcagcgggtagttaatagc
aagcaaactgtatcaggatttattggaccacagcttcctccccacctgattaagacttct
ggccatttaaatggaactgggtcactaaaagaaactccaagcagttctgtggtgtgtgct
agcaatgttaccctaaccaggccaaattcggcgcctccttcaacttccattcaaaactgg
acaattaacagacccactattcctgatccttcaaaaaaacagaagattactatcagtatt
cacaacaaactgcctgctcgccaaagcctggcccaacccaatcttcataacagctctttg
gagagtctgagcaagcctgttccttcatccaccattactaattcctctgcagtacagtct
acctcaagtgcttctacaatgtcagttgctactaaagtacctaaacaattggctactagt
gaagcttgttctaaagcagtactgaatggcaagtctaagctaagctccagcacattggtc
ccttatggtgcagaatcttcagaagaatctgatgaagattcaaaggcattagttaaggag
aatggacacaagaaacctgtaaatggaattttgattggaagtgtagctagttcattgcag
aattcctgttcttcctatcaagatgctgaaaaggaggtaccccagcatgaactgccaaaa
actgacagagtcaatggtgacaaagtcaatggtgctatttgtctagataataattctaaa
gacaatggtttgaaacttgatgattccacttgccaaaccaaggctcttaaaactacagag
actttctttcctaaaatgaatggattgcatggaaaaatgtgtgcaactctgccttcagtc
cctgaagataaaatcttagaatcattcaaattcagccaggtgaaaacttcatcagaggaa
ataagtataactggaactgaaaaaactgatcgcagtattcccaacgattgctgcaacagc
cagagtccctttgctgcatcagctcctgagaccatttctaccaaagaaggaattgtagag
aatactgtggcgaaaaaggaggaggatcattctgacatcattgatcagcataaagctaag
aagagaaccttgggcactgaagaggaacatgctcttgaggagcctgcggataaggcaaga
ggaccaaaagaagcaaaggtgatgttaaaggagactcctctgcacatcaaagggcctgct
gagactgtagagaaactgggacaaagctccctcataaggtctgacagtgaatgtaattcc
aaaaaactttctaccttaaacgttatagacaaatgccaagaaacaaagcacagtgctagt
gactattcagagggacagagtgctatggactctcctacaaaactgagcaaggttctagag
agctattctaaggaaaatgagggactgaacgataatgacaaacttggagaagacaaagaa
agacaaaaacttcagacgcattctccaagtaaagaaaaggtctgcaccaccaagaagatg
gagagggagcactactgtaaaaagagacggcactctgaaaacgaggagaaactggacagt
cgtgactccagaaagagacgaacgtacagcagtgagagggggaagcaagatcatcactac
aagaagcaccatgacaatggaagcaaatacaaactcatgcataatgaaagaagcagcaga
agctcaggaagatatcctgattacagatcccacagcagagaacaaaacgataaggatggg
ggttggtgttatcttcctaagagagacggctcttggaatagagagaggtattaccaagac
atcccacgaaggtgggacaaaggtagatattactatgattattatcctttccatgcacca
agagacaatcgagagagaaagttctctcacgtggacagagagtatgagaaaccaagccac
atttatgaccctaggtcatacaaggactattactacaagacgcgatggattcatgagcca
gccactaaggagagagagaaacgcaacttcagcagctccaaaggagactttcaccattgc
ccagcaccaccccagcattctgaaaagtattcctcagagaaaagtgcacccacagctgga
gaaaacacttccagttttgagacttcttgcctcaaatacgaggacgtaaaggacagaaaa
agaagatgccctattggagactag
DBGET
integrated database retrieval system
