KEGG   Gavialis gangeticus (Gharial): 109294732
Entry
109294732         CDS       T07453                                 
Symbol
NWD1
Name
(RefSeq) LOW QUALITY PROTEIN: NACHT domain- and WD repeat-containing protein 1
  KO
K24734  NACHT domain- and WD repeat-containing protein
Organism
ggn  Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:ggn00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:ggn04990]
    109294732 (NWD1)
Domain-containing proteins not elsewhere classified [BR:ggn04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   109294732 (NWD1)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_WDHD1_1st WD40_Prp19 WD40 Beta-prop_WDR3_2nd WD40_CDC20-Fz Beta-prop_EML_2 WDR55 EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_EML WD40_MABP1-WDR62_2nd WHD_NWD1 Beta-prop_TEP1_2nd WD40_Gbeta NBCH_WD40 Beta-prop_VPS8 ANAPC4_WD40 Beta-prop_WDR19_1st Beta-prop_CAF1B_HIR1 Beta-prop_IFT140_1st Beta-prop_Aladin Beta-prop_WDR41 Beta-prop_HPS5 Beta-prop_ACSF4 Beta-prop_Vps41 Beta-prop_LRRK2 Beta-prop_RIG_1st Beta-prop_pof12
Other DBs
NCBI-GeneID: 109294732
NCBI-ProteinID: XP_019368729
LinkDB
Position
Unknown
AA seq 1179 aa
CSVRGLLPGLCLQVSLALGLPPPPARLTRAYAGALRFFGRLLLAVSRRGSQALVLLLDSV
DQLLPVXRRLHWLPKACPPNVHVVLSVSAAEHGLLQTLREAVPEAEAYFEMGPLSSEEGR
EMLEGLLASAGRKLSPAQRAVLQHSLPARGDPLLFQLAFQQVWSWASYTPPSALVISHRV
QDALHQLCDTLEKLHGSVLVSHALGYIAFSQNGLAEAELKDVLSLDDEVLSEIYQHSSPP
SKSILRLPPLLWAQLCHDVQDCLVEMQADGFTLLGLAHRQFAEVVQNRYLSAQNQTKRHL
LLADFFRGTWSWGMKKPFLLPLCGTTLNADRKVAPQLLWFSDTIANQRKLSEFPFHLLGA
GRIEELKRDILGNMNWIICKITAAGIESIVDDFAMCITHTNCPELSLVQDVLLLLKPTID
DMDGVVEVSTIYTEVLGRLNFFISSYPDLIGRLCQQCLHWFEVCPHPVLIPLCGFLQPPG
GPLQKTLTGFLKGITVLELSSEHKLMVAGSQDGSMLVCNMENIEVMQALTGHTAEVKCVK
VFGKGTSAVSAAMDHTLRIWNLVSGREKFSIADTHFSAPHLCQLCVDERNMVVYSASGEK
VSGWHLETAELVFQISGDVQDVWLCTAVFVPRLVILIVSEGGIVCLWDRSTGAMQSKHQL
SWLQKEAPTCSALIQKQGKMVAGFSRGSLSMISSDRTSLLEKLPQGVRFVVTSEDESLLA
AGFGEYVRVFLADSRGFCRFLATDLEHEGVVHTAVISSDNNIIVTGSQAAYIQVWSLSEQ
GLLKDTLGNLGTPATLLALHGCTLVSASHNAPCVRAWDLSYDNKHKTLAPFLGCSAVSQD
GNYVYFPQPGENHKVIIWNSIEGAECDTLDTSTQVRSLEVAKQRELLFTGLVSGTVLVFP
LNSRQDVVCIPPPESQKPVNHIALNRQETQLVVAYDNLVLVLDVNPGEPCPVTDKPIYTF
YTQLPAVISSVAVLTDGQVLYGMSSGDLFLYDCPRSRVFPLEAHRSKITCLENSHGEQWA
LSGSEDSLLCLWDLELCQWKHEICYYKHSSFLKGIECACFSKDDKYLYTGLLDQSIAVWD
VSNGALLAVHFVHATARRIVPTADGFVATTNLGYIIREKFHCRQSSSHQHDPLQHVEATC
IVKSRKGEEANSRVQHSNQGNASRHQIQNHKPSQSCAIV
NT seq 3540 nt   +upstreamnt  +downstreamnt
tgctcggtgcgcgggctgctgcccggcctgtgcctccaggtaagcctggccctcggcctg
ccgccgccgcccgcgcggctcacccgcgcctacgccggcgcgctccgcttcttcggccgc
ctgctcctcgccgtctcccgccgcggctcgcaggcgctggtgctgctcctcgactccgtg
gaccagctgctcccggtgncccgccgcctccactggctgcccaaggcctgccccccaaac
gtgcacgtcgtgctctccgtctccgcagcggagcacggcctcctgcagaccctgcgcgag
gctgtgcccgaggccgaggcgtactttgagatggggccgttgtccagcgaggaaggcagg
gagatgctggaggggctgctggcatcagccggacggaagctgagcccagctcagcgggct
gttctccagcacagcctcccagcccgcggggaccccttgctgtttcagctggctttccag
caggtctggagctgggcctcctacaccccgccctcagcactggtgatcagtcacagggtc
caggacgccctgcaccagctgtgtgacacactggaaaagctccatggctcggtcctggtg
tcgcacgctcttggctatattgccttctcccagaacgggctggcagaggcagagctgaag
gatgtcttatcccttgatgatgaggttctgtctgagatttaccagcactcctctcctcca
agtaaatccatcttgcgtttgccccctctgctgtgggcacaactttgccatgatgttcaa
gactgcttagtggagatgcaagcagatggcttcacccttcttggccttgctcacaggcag
tttgctgaggttgtgcagaatcgttacctgtccgcgcaaaaccaaaccaaacggcatttg
ctcctggcagatttcttcagggggacttggagctgggggatgaaaaaaccctttcttttg
ccactctgtggcacaactctcaatgctgacaggaaggtagcacctcagctgctctggttc
tctgatactattgcaaatcagaggaaactgagtgaattcccttttcacttactcggtgct
gggcgaattgaggagctaaagcgggacatactggggaatatgaactggatcatctgtaaa
atcactgctgctggaatagagagcattgtggatgactttgccatgtgcattactcatact
aactgcccagaattaagtcttgtgcaagatgtactcctcctcctgaaaccaaccattgat
gatatggatggcgttgtagaagtgagtactatatatacagaagtgctgggcaggcttaat
tttttcatctcgtcttatccggatctcattgggaggttgtgccagcagtgtttacactgg
tttgaagtctgtccacatcctgttctcatcccactgtgtggattcctccagcctcctggt
gggcccctgcagaagactctcactgggtttctcaaaggtatcacagtactggagctcagt
tctgagcacaagctaatggtagcagggtcccaagacggttcaatgcttgtgtgcaacatg
gagaatattgaggtgatgcaagccctgactggtcacactgctgaggtgaagtgtgtgaaa
gtgtttggaaaagggacttctgctgtctcagctgccatggatcacactttacgtatctgg
aatttagtttctggcagagaaaagttttcaatcgcggacactcacttcagcgcaccgcat
ctgtgtcagctttgcgtagatgaaaggaacatggtcgtttattcagcatcaggtgaaaag
gttagtggctggcatctggaaacagcagaacttgttttccagatttctggtgatgtccaa
gatgtgtggctgtgcactgctgtgtttgtcccaaggctggtaattctgatagtgtctgaa
ggaggaatagtgtgcctgtgggacagaagcactggagcaatgcagtctaaacaccagcta
tcatggctacagaaagaagcaccaacttgcagtgctttgatccagaagcaaggaaaaatg
gtggcaggatttagcagagggtccctgtccatgatttcttctgatagaaccagcttgctg
gagaagcttcctcaaggcgttcgctttgtggtgacatcagaagatgagtctctccttgct
gcaggctttggggaatacgtgagagtgttcctggctgattcacgtggattctgcaggttt
ctagcaacagacttggagcatgaaggtgtggtgcatacagctgttatctcttctgacaat
aacatcattgttacgggctctcaggctgcatatatccaggtgtggagtttatcagaacag
ggtttgctgaaggataccttgggtaacctgggaacaccagcaacactcttagccctgcat
ggctgcacactggtatctgcgtcccacaatgccccatgtgtcagagcatgggacctctct
tatgataataagcacaaaactttagcacctttcctaggttgcagtgcagtgtctcaagat
gggaactatgtttacttccctcagcctggagagaaccataaagtcatcatctggaacagc
atagaaggtgcagagtgtgacacactggacacctccacccaagtgagaagcctggaggtg
gccaaacagagagaactccttttcactgggctggtatctggaacagtcctggtttttcca
ctgaattccaggcaagatgtggtgtgcatcccacccccggagtcacaaaaaccagtcaac
cacatagcactcaacaggcaggaaacacaactagttgtagcatatgataacttagtcctt
gtgctggatgtgaaccctggagagccatgcccagtgactgacaagcccatttacaccttt
tatacccagctccctgctgttatttccagcgtggctgtccttacagacggtcaggtcctc
tatggcatgtccagtggggacttattcctttatgactgtccacgttcccgagtatttcct
ttggaagcccacagaagcaaaatcacttgtttagaaaatagtcatggagaacagtgggca
ctgagtggctctgaggattctctgctgtgtctgtgggacttggagctctgccagtggaaa
catgagatatgctattataagcattcatccttcttgaaaggtattgaatgtgcttgcttc
tcaaaagatgataaatacctgtatactggattactggatcagtccattgcagtttgggat
gtttcaaatggtgctctgctggctgtgcattttgtgcatgcaactgcaagaagaatcgtg
ccaactgctgatgggtttgttgcaacaacaaatcttggctatatcattcgtgagaagttc
cactgccgacagtccagcagccaccagcatgacccactccagcatgtggaggcaacatgc
atagtcaaatccaggaagggagaagaggcaaattcaagagtgcagcacagcaatcaagga
aatgcctccagacaccagattcaaaaccacaagccatcacagagctgtgcaattgtgtaa

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