Gavialis gangeticus (Gharial): 109294769
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Entry
109294769 CDS
T07453
Symbol
APEX1
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
109294769 (APEX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ggn03400
]
109294769 (APEX1)
Enzymes [BR:
ggn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
109294769 (APEX1)
DNA repair and recombination proteins [BR:
ggn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
109294769 (APEX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
109294769
NCBI-ProteinID:
XP_019368773
LinkDB
All DBs
Position
Unknown
AA seq
318 aa
AA seq
DB search
MPKRGKKQGGGDSGEEPEVPEPEAKKNKKEGAKGAKEKAVEGPILYQDPPDKLASPSGKR
YTLKVTSWNVDGLRAWFKKKGLEWVREEGPDVLCLQETKCAEKLLPPEIRDMPEYPHKYW
ACSDDKEGYSGVALLSKTEPLNVTYGIGEEEHDKEGRVITAEFPSHFLVTAYVPNAGRGL
VRLGYRQQWDIAFRAYLKGLDARKPLILCGDLNVAHKEIDLKNPKGNKKSAGFTPQEREG
FGELLAAGFLDTFRHLYPDTPYAYTFWTYMMNARAKNVGWRLDYFLVSQSLQGAVCDSKI
RTQVMGSDHCPITLYVAL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagcgcgggaagaagcaggggggaggggacagcggggaggagcccgaggtccca
gagcccgaggcgaagaagaataagaaagaaggagccaaaggcgccaaggagaaggctgtc
gaggggccgatcctgtaccaggaccccccggacaagctcgcctcccccagtgggaagagg
tacacactgaaggtcacctcctggaacgtggacgggctccgcgcgtggttcaagaagaag
gggctggagtgggtgcgcgaagagggcccggatgtgctgtgcctacaggagacaaaatgt
gcagagaagctgctgccccctgagatacgggacatgcccgaatacccacacaagtactgg
gcctgctctgatgacaaagaaggctatagcggggtggccctgctctccaagaccgagccg
cttaatgtcacctacggcattggtgaggaagagcatgacaaggaggggcgggtgatcaca
gctgagttcccctcacacttcctcgttaccgcttacgtgcccaatgcaggccggggcctg
gtgcgcctggggtaccgccagcagtgggatattgccttccgggcctacctgaaagggctg
gatgcccgcaagcctctcattctgtgtggggacctcaatgtggcccacaaggagattgac
ctcaagaaccccaagggcaacaagaagtcagctggattcacaccccaggagcgcgagggc
tttggggagctgctggcagccggcttcctcgacaccttccgtcacctgtacccagacacg
ccctatgcctacaccttctggacctacatgatgaacgcccgcgccaagaacgtgggctgg
cgcctggactatttcctggtatcgcaaagcctgcaaggggctgtgtgtgacagcaagatt
cgcacccaggttatgggcagtgaccactgccccatcaccctctatgtggccctctga
DBGET
integrated database retrieval system
