Gavialis gangeticus (Gharial): 109294984
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Entry
109294984 CDS
T07453
Symbol
COMP
Name
(RefSeq) cartilage oligomeric matrix protein
KO
K04659
thrombospondin 2/3/4/5
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn04145
Phagosome
ggn04510
Focal adhesion
ggn04512
ECM-receptor interaction
ggn04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109294984 (COMP)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
109294984 (COMP)
09144 Cellular community - eukaryotes
04510 Focal adhesion
109294984 (COMP)
09142 Cell motility
04820 Cytoskeleton in muscle cells
109294984 (COMP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ggn04131
]
109294984 (COMP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ggn04147
]
109294984 (COMP)
00536 Glycosaminoglycan binding proteins [BR:
ggn00536
]
109294984 (COMP)
Membrane trafficking [BR:
ggn04131
]
Endocytosis
Phagocytosis
Opsonins
109294984 (COMP)
Exosome [BR:
ggn04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
109294984 (COMP)
Exosomal proteins of colorectal cancer cells
109294984 (COMP)
Exosomal proteins of bladder cancer cells
109294984 (COMP)
Glycosaminoglycan binding proteins [BR:
ggn00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
109294984 (COMP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
EGF_CA
EGF_3
COMP
cEGF
EGF
Motif
Other DBs
NCBI-GeneID:
109294984
NCBI-ProteinID:
XP_019369167
LinkDB
All DBs
Position
Unknown
AA seq
774 aa
AA seq
DB search
MPRRDSNMIATLAFAFLLSLCSFTSSQMTSVGGGDVGPQMLAEMRETNRVLLEVRDLLKQ
QIKEITFLKNTVMECDACGMHTEVTGPGISVTAFNRCTPNPCFPGVTCTQTSTEPGFRCG
GCPPGYTGNGTHCTDINECSVNPCFTKVRCTNTAPGYRCDPCPSGYSGQPVEGVGLPFAR
ANRQVCTDINECETPGTTTCVPNSICINTRGSYKCGACKPGFIGDQVTGCRNQTQRRCPN
GELSPCHEKAECIVERDGSISCVCTVGWAGNGYVCGKDTDIDGFPDEKLRCTDRKCRKDN
CLTVPNSGQEDADRDGIGDACDDDADGDGILNTEDNCVFVRNTDQRNADKDSFGDVCDNC
RNVKNNDQRDIDGDGKGDECDDDMDGDTIKNAVDNCKKIPNLDQKDSDGDGIGDVCDSCP
TISNPDQKDTDHDFVGDVCDTNQDQDGDGHQDSRDNCPTVPNSSQQDTDGDGVGDECDDD
DDNDGIPDTKPPGPDNCRLVPNPGQEDTDGDGIGNLCEDDFDSDRVIDRIDVCPENAEVT
LTDFRAFQTVVLDPEGDAQIDPNWIVLNQGMEIVQTMNSDPGLAVGYTAFNGVDFEGTFH
VNTATDDDYAGFIFGYQDSASFYVVMWKQMEQTYWQANPFRAVAEPGIQLKAVKSKTGPG
EYLRNSLWHTGDTTDQVKLLWKDPRNVGWKDKTSYRWFLQHRPQVGYIRARFYEGPDLVA
DTGVVLDTTMRGGRLGVFCFSQENIIWSNLRYRCNDTVPGDYETFQTQQNQRRV
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgcagagattccaacatgattgcgactctagccttcgctttcctcctgagcctc
tgttcttttacatcaagtcagatgacaagtgttggaggaggcgatgttgggccccagatg
ctggctgagatgagagagacgaacagggtgctgctggaagtcagagacttgctgaagcag
cagatcaaggagataacattcctgaagaacacggtcatggagtgtgatgcctgtggcatg
cacacagaggtgactggcccagggatcagcgtgacagcattcaacagatgcacgccaaac
ccttgtttccctggcgttacctgtacccagaccagcaccgaacctggcttccgctgtgga
ggctgccctccaggatatacaggcaatgggacacattgcacagacatcaatgagtgctct
gtcaatccctgcttcaccaaagtccgctgcaccaacacagcacctggctaccgttgtgac
ccctgcccttctggctactctgggcaacctgtggaaggggttggactaccctttgccaga
gccaacagacaggtttgcactgacatcaatgagtgtgagacgcctggcaccaccacctgc
gtccccaactccatctgcatcaatacccggggatcctacaagtgtggagcttgtaagcct
ggcttcatcggggaccaagtcaccgggtgcagaaaccagacacagagacgttgtcctaac
ggggaactcagcccatgccatgagaaggctgagtgcatcgttgagcgcgatgggagcatc
tcttgtgtgtgcactgtagggtgggcagggaatggctacgtctgcgggaaggacaccgac
attgatgggttccctgatgagaagctgcgctgcacagaccgcaagtgtcgcaaggacaac
tgcctgactgtccccaactctggccaggaggatgcagacagggatggcattggcgatgca
tgcgatgatgacgcggatggagacgggatattaaatactgaggacaactgtgtctttgtg
cgcaatacagaccagcgcaacgcagacaaggacagctttggtgacgtctgtgacaactgc
cggaacgtgaagaacaacgaccagcgggacattgatggcgatgggaagggcgacgagtgc
gatgacgacatggatggagacacaatcaagaatgcagtggacaactgtaagaagatccct
aaccttgatcagaaggacagtgatggggatggcataggcgatgtgtgtgacagctgccca
accatcagcaatccagaccagaaagatacagaccatgactttgtgggagatgtctgtgac
accaaccaggaccaagatggggacggccaccaggactcgcgagacaactgccccacggtg
cccaacagttcccagcaggacaccgatggcgatggggttggagacgagtgtgatgatgac
gacgacaatgacggcatccctgataccaaacctccgggccccgacaactgccggctggtc
cccaaccctggccaagaggatacagatggtgacggcattgggaacctgtgtgaagatgac
tttgacagtgacagggtgatcgacagaatcgacgtgtgcccagagaacgcggaggtgacg
ctgacagacttcagggctttccagactgtcgtgctggacccagagggtgatgcacagatt
gaccccaactggatcgtcctcaatcagggcatggaaatcgtccagaccatgaacagcgac
cccggcctggctgtaggttacactgcattcaatggtgtggattttgagggcaccttccac
gtcaacactgctacggatgacgactatgctggctttatattcggctatcaggacagcgcc
agcttctacgttgtcatgtggaagcagatggagcagacctactggcaggcaaaccctttc
cgagcagtagctgagcctggcattcagctgaaggctgtgaaatctaaaacgggccctggc
gagtatctccgcaattccctgtggcacacaggagacaccactgaccaggtcaaactgctg
tggaaagaccctcgcaatgttggctggaaggacaagacctcttaccgctggttcctccag
caccggccccaagttggctacatcagagctcgcttctacgaaggccctgacctggtagcg
gacaccggtgtggttcttgatacaaccatgcgagggggtcgcttgggtgtcttctgcttc
tcccaggagaacatcatctggtcaaacctgcgctaccgttgcaatgacactgttccagga
gattacgagacattccagacccagcagaaccagcgcagggtttaa
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