KEGG   Gavialis gangeticus (Gharial): 109295154
Entry
109295154         CDS       T07453                                 
Symbol
KDM5B
Name
(RefSeq) lysine-specific demethylase 5B isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
ggn  Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:ggn00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ggn01009]
    109295154 (KDM5B)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ggn03036]
    109295154 (KDM5B)
Enzymes [BR:ggn01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     109295154 (KDM5B)
Protein phosphatases and associated proteins [BR:ggn01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     109295154 (KDM5B)
Chromosome and associated proteins [BR:ggn03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    109295154 (KDM5B)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID JmjN zf-C5HC2 Exo70_N zf-PHD-like PHD_2 Lipoprotein_20
Other DBs
NCBI-GeneID: 109295154
NCBI-ProteinID: XP_019369374
LinkDB
Position
Unknown
AA seq 1544 aa
MAEFLPPPECPVFEPSWEEFADPFAFIHKIRPIAEQTGICKVRPPPDWQPPFACDVDKLH
FTPRIQRLNELEAQTRVKLNFLDQIAKFWELQGCTLKIPHVERKILDLFQLNRLVAEEGG
FDVVCKERKWTKIATRMGFAPGKAVGSHIRAHYERILYPYNLFQSGASLLAPDICSKLMC
LVDHAVLKKCLQKPDLTNDTKDKEYKPHDIPQRQSVQPSETCPPARRAKRLRAEATNIKT
ESETPGARTHNLRRRMGCTPSKCENEKEIHSTVKQELTEKREHIGDVEKEKPKSRSKKPT
SSVDLYVCLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPQCLAQECNKP
QEAFGFEQAARDYTLRTFGEMADAFKSDYFNMPVHMVPTELVEKEFWRLVSTIEEDVTVE
YGADIASKEFGSGFPVRDGKFKVRPEEEEYLDSGWNLNNMPVMEQSVLAHITADICGMKL
PWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGAPGYAAEQLEDVMKKLAPELFES
QPDLLHQLVTIMNPNTLMAHGVPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVNFCT
VDWLPLGRQCVEHYRLLNRYCVFSHDEMICKMASKADDLDVVVASTVQKDMSIMIEDERA
LREAVRKLGVTETERVAFEMLPDDERQCLKCKTTCFMSAVYCSCKPGLLVCLYHVEDLCS
CPTYKYKLGYRYTLDDLYPMVNALKLRAESYNEWASNVNEALEAKMNNKRSLISFKALIE
ESEMKKFPDNDLLRHLRLVTQDADKCASVAQQLLNGKRQTRYRSGGGKSQNQLTVNELRL
FVRQLYALPCVLSQTPLLKDLLDRVEAFQQHSQKLLSEEIPSAAELQKLLDVSFEFDVDL
PQLPELRIRLEQARWLEDVQQACADQSSLTLDDMRRLIDSGVGLAPYPAVEKAMAKLQEL
LTISEHWDDKARNLIKARPRQSLSSLVAAVKEIEEIPAYLPNGIVLKDVAQKAKDWLQEV
EALQGGGRVPVLDTLVELLTRGRSIPVHLDYLPRLESLVAEVQAWKECASNTFLTENSPY
SLLEVLCPRCDIGISGLKKKQKKLKEPVPSGKKKGTKLESLSDLERALSESRDTASAMAT
LGEARLKEMEALRCLRAANEGKVLATEEDGEMKVCLCQKEPVAPMIQCELCRGFFHTSCV
SAPSILQGPHVWLCPHCHRSEKPPLEKILPLLASLQRIRVRLPEGDALRYMIERTVNWQH
RAQQMLYSGNLKHIQDKVGSGLLYSRWQTTAGQLPETNKVSQTIGAMSFSLPHDWDSRTI
YLHSPFSTGQNCIPLHVISAELDELMMEAQLLQVSLPEIQELYQILFTKQSPVLQAEQKS
PVGPLNEKNEYCRGRRDGVGYMERKLKRRFEREGFCDGKRARIKKMKTPKKKKLKLNYSK
DLTNNKLERERERERLIEVQRSSESHLLPSDTSFSEQEDSEDEDAICPAMNCLQPEGDEV
DWVQCDGSCNQWFHQVCVGVSPEMAEKEDYICVSCAGKDSQHRK
NT seq 4635 nt   +upstreamnt  +downstreamnt
atggcggagttcctgccgcctcccgagtgccccgtgttcgagcccagctgggaggagttc
gccgaccccttcgccttcatccacaagatccggcccatcgccgagcagacgggcatctgc
aaggtgcggccgccgccggattggcaaccaccgtttgcatgtgacgttgataaacttcac
tttactccacggatacagaggctgaacgaattggaggctcagactcgtgtaaaactgaat
tttctggaccagattgcaaagttttgggagctccaaggatgtacactcaaaataccacat
gtagagaggaagatcttggatttatttcaacttaataggctagtggcagaagaaggtgga
tttgatgtagtctgtaaggagaggaaatggaccaaaatagccacaagaatgggttttgct
cctggcaaggctgtgggttcacacatccgtgcacattatgagcgtattctttacccctac
aacttattccagtctggagctagtctactggcacctgacatttgttccaaactgatgtgt
ttagtggatcatgcagttctgaaaaagtgtttgcagaagcctgacctcaccaatgataca
aaggacaaggaatataaacctcatgatattccccagaggcagtctgttcagccatctgaa
acttgtccacctgcacgtcgtgcaaaacgcctgagagccgaggctactaatatcaaaact
gaatctgagaccccaggagccagaactcataacttgagacgcagaatgggatgtacacct
tcaaagtgtgaaaatgaaaaggaaatacacagcacagtgaaacaagaacttactgagaag
agagaacacattggagacgtggagaaagagaaaccgaaaagtcgctctaaaaaacccact
agttcagtggacttgtatgtatgtctcttgtgtggtagtggtaatgatgaagaccgtctt
ctgttgtgtgatggctgtgatgatagttaccacactttttgtttaattccaccccttcat
gatgttcccaaaggggactggaggtgtccccagtgtctggctcaggagtgtaataaacct
caagaagcatttggttttgaacaagcagcaagagactacacactccgcacatttggagag
atggcagatgcattcaagtcggactattttaacatgcctgtacatatggttcctacagag
ctggttgaaaaggagttttggcgacttgttagcaccattgaagaggatgtcacagtggaa
tatggggctgacattgcttcaaaggagtttggcagtggctttccagttagagatgggaaa
tttaaagttcggcctgaagaagaagagtatcttgacagtggctggaatttgaacaatatg
cctgtgatggagcagtctgtccttgctcacatcactgcagatatatgtggaatgaaatta
ccttggctgtacgtaggaatgtgcttttcttcattttgctggcatattgaggaccactgg
agctattccatcaactacctgcactggggggagcctaagacttggtatggagccccagga
tatgcagctgaacaactggaagatgtaatgaagaagttggctcctgagctatttgagtct
caaccagatcttttgcaccaacttgtcaccattatgaacccaaatacgctgatggcccat
ggagtgcctgtttaccgaaccaatcagtgtgctggggagtttgtgattacatttccaaga
gcctatcacagtggctttaaccagggtttcaattttgctgaagctgttaacttctgcaca
gttgactggctgccattaggtcgtcaatgtgtggaacactatcgcctattaaaccgctat
tgtgtattttctcatgatgagatgatatgtaaaatggcttccaaagcagatgatcttgat
gttgtggtagcatctacagttcaaaaagatatgtctattatgatcgaagatgaaagggca
ttgcgtgaggctgtgcgtaaactgggagtgactgagactgagagagtggcttttgaaatg
ttgcctgatgacgagcgccagtgtttaaagtgcaaaaccacttgcttcatgtctgctgtt
tactgttcatgtaaacctggtttactggtttgcctatatcatgtagaagatctctgttcc
tgtcccacttataaatataaactgggctaccggtatacccttgatgatctttacccaatg
gtgaatgcactaaaattgcgtgcagaatcctacaatgaatgggcttctaatgtaaatgaa
gctttggaggcaaaaatgaataataaaagaagcctcatcagttttaaggctttgatagaa
gaatcagaaatgaaaaagtttccagataatgatctgctgcgacaccttagattagttacc
caggatgctgacaaatgtgcctcagttgcacaacaacttcttaatggcaaaagacaaacc
agatatcgttctggtggagggaaatcccagaatcagctgactgtgaatgaactccggttg
tttgtaagacagctatatgctctaccctgtgtcctcagtcagacaccattactgaaggat
cttcttgatcgtgtggaagctttccaacagcatagccagaaactactttctgaagaaata
cccagtgcagcagaactacagaagctcttagatgtcagttttgagtttgatgttgatctt
ccacaattacctgaactgcggatacgcctggagcaggcacgctggctagaagatgtacaa
caggcttgcgcagaccaaagctcccttactcttgacgatatgagacgcctcatagactcg
ggtgttggattggctccttatccagcagttgagaaagcaatggctaagctgcaagaactc
cttactatatctgaacactgggatgacaaagccagaaatttgataaaggccagaccgcgg
cagtcactaagcagtcttgtagctgcagtaaaggagatagaggagattcccgcttatctc
ccaaatggaattgtgctgaaggatgttgcgcagaaggccaaagattggctacaagaagtg
gaagccttgcagggtggagggcgtgtaccagtacttgacacgcttgtggagcttttgaca
agaggtcgctctatcccagtacatctggactacttgccaagactggagtccttagtggca
gaggttcaagcatggaaggaatgtgccagcaatacgtttctgacggagaactccccttat
tctcttctagaggtgttatgtcccagatgtgatattggaatatctgggcttaaaaaaaaa
cagaagaaattaaaggagccagtaccaagtggaaagaagaagggcaccaaattggagagt
ctgagtgacctagaaagagctttatctgagagtagggatactgcctctgcgatggccaca
cttggtgaagcccgtctgaaggagatggaagcacttcgttgtctgagagcagcaaatgaa
gggaaagtgctagctactgaagaggatggagagatgaaagtttgcctgtgccagaaagag
ccagttgcccccatgatacagtgtgaactctgtagagggttctttcacaccagctgtgtt
tcagcacccagcattttgcagggaccccatgtgtggctctgtcctcactgccatagatca
gaaaagccaccgttagaaaaaatcctacctttgctggcctccctgcagcgtatcagagtg
aggcttcctgaaggagatgctttacggtatatgatagagagaactgtgaactggcagcat
agagcgcaacaaatgctatattcagggaatctaaaacacatacaagacaaagttggctca
ggactattgtacagcagatggcaaaccacagcaggccagctgccagagacaaacaaggta
tctcagacaattggtgctatgtctttctctctgcctcatgactgggatagcagaaccata
tatttacattctcctttttctacaggacaaaactgcatcccccttcatgtcattagtgca
gagctggatgagttgatgatggaagcccagctgctacaggtttcgttacctgaaatacag
gagctgtaccagatcctattcacaaaacagagccctgttctgcaagcagagcagaagtca
ccagtaggaccattgaatgaaaagaatgagtactgccggggcaggagagatggagttggt
tatatggagagaaagttaaagaggcgctttgaaagagagggcttctgcgatggaaagaga
gcaaggataaaaaaaatgaaaacccccaaaaagaagaaactgaaactgaattactcgaag
gacctcactaacaacaaattggagagggagagagagagagagcggctcattgaggtgcag
cgctccagcgaaagccacttgcttccctcagatacatcattctcagagcaggaagactct
gaggatgaagatgcaatctgccctgctatgaactgtctgcagcctgaaggagatgaggtg
gattgggtccagtgtgatggcagctgcaaccagtggttccatcaggtgtgtgtgggtgtc
tctccagagatggcagagaaggaagactacatctgtgtcagctgtgctgggaaggactct
caacatcgaaagtaa

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