KEGG   Gavialis gangeticus (Gharial): 109295218
Entry
109295218         CDS       T07453                                 
Symbol
SOX13
Name
(RefSeq) transcription factor SOX-13
  KO
K09269  transcription factor SOX5/6/13 (SOX group D)
Organism
ggn  Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:ggn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ggn03000]
    109295218 (SOX13)
Transcription factors [BR:ggn03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    109295218 (SOX13)
SSDB
Motif
Pfam: HMG_box HMG_box_2 PTPS AAA_23
Other DBs
NCBI-GeneID: 109295218
NCBI-ProteinID: XP_019369470
LinkDB
Position
Unknown
AA seq 620 aa
MSMRNPISPHLDLDGAGNMVNCAIKTEGKESCYESPKGAAAGPESHASSLHGAPPSLRDT
TDPRALPQESPSPGNDAIDSKSSTFEPAVGSQEKLDFNRNLKEVMPAIEKLLSSDWKERL
LGRNSMESKEVKGTQESLAEKELQLLVMINQLSTLRDQLLTAHSEQKNMAAMLFEKQQQQ
MELARQQQEQIAKQQQQLIQQQHKINLLQQQIQQVNMPYVMIPAFPPSHQSLPVAPDSQL
ALPIQPIPCKPASLSAVEYPVQLLHSPPPPSLKRPTSSSHLQMQESSQPLNLTAKPKGPE
LPSASSSPSLKMGSCQSLTPNHGATRDLQSSPSNLPLGFLGEGDAITKAIQDARQLLHGH
SGALEGSLSNPYRVKDHVGVDSSPAKERVEETCAHRLDEAMITCDMDGSRHFPESRNNNH
IKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQ
HLEKYPDYKYKPRPKRTCIVEGKRLRVGEYKALMRNRRQDARQGFLIAPQSSQMQATSSD
VLYPRPVGLQLTPPLMEHYLPRGTDPNMPVIINTRSLKAQEADGAEDRHSVADGEMYRYS
EEEDSEGEDKSDGELVVLTD
NT seq 1863 nt   +upstreamnt  +downstreamnt
atgtccatgaggaaccccatctctccccatctggacctcgatggagccggcaacatggtg
aactgcgccatcaagacagaggggaaggagagctgctacgagtccccaaagggagcagct
gccggccccgagtcccatgccagcagcttgcacggagcaccgccatcactgagagacacc
actgacccccgggccctgccacaggaatccccgtcccccgggaacgacgcaatagactcc
aagagctccacgttcgagcctgccgtaggcagccaggaaaagttggacttcaatagaaac
ttgaaagaggttatgccagccattgagaagttactctccagtgactggaaggaaaggctt
ttgggaagaaatagcatggaatccaaagaggtgaaaggtacccaggagagcttagcggag
aaggagctgcagttacttgtcatgatcaaccagctctccacgctgagggaccagctcctg
acagcccattcagagcagaagaacatggcagccatgctctttgagaagcagcagcagcag
atggagctggcccggcagcagcaggaacagattgccaagcagcagcaacagctcattcag
cagcagcacaagattaacctgctgcagcagcagatccagcaggtcaacatgccctatgtc
atgattccagcctttcctcccagccatcagtcactcccagtggctccagactcccagcta
gcacttcccatccagcccatcccttgcaaaccagcttctctttctgcagtggagtaccca
gtgcagctactacacagccctcctccgccgtcactcaagagacccaccagctccagccac
ctccagatgcaggagtcttcacagcccctgaacctaacggccaagcccaaaggccctgag
ctccccagtgcctccagctctccgagcctgaagatgggcagctgccagtccctcacaccg
aatcacggggccacgcgggacctgcagtccagcccttccaacctgcccctggggtttctg
ggagagggggacgccatcaccaaagccatccaggatgcccggcagctcctgcacggccac
agcggggccttggagggctctctgagcaacccctacagagtgaaggaccacgtcggagtg
gactcctccccagctaaagagcgggtggaagagacctgtgcacacaggctggacgaggcc
atgataacctgtgacatggatggctcacggcacttccccgagtccaggaacaacaaccac
atcaagcggcccatgaacgccttcatggtctgggccaaggacgagcggcggaagatcctg
caggccttcccagatatgcacaactccagtatcagcaagatcctggggtcccggtggaag
tccatgacgaaccaggagaagcagccctattacgaggagcaggcacggctgagccggcag
cacctggagaagtacccagactacaagtacaagccgcgacccaagcgcacctgcatcgtg
gagggcaagcgacttcgcgtgggcgagtacaaggccttgatgaggaaccggaggcaggat
gccaggcagggcttcttgatagcaccccaaagcagccagatgcaagccacctcctcagat
gtcctgtacccgaggccagtgggtttgcagctgacgccaccgctgatggagcactacctg
ccccgcggcacagaccccaacatgcccgtcatcatcaacacacgcagcctcaaagcccag
gaggccgacggcgcggaggacaggcactcagttgcggatggcgagatgtaccggtacagc
gaggaggaggactccgagggcgaggacaagagcgatggggagctagtggtgctgacggac
tga

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