Gavialis gangeticus (Gharial): 109295288
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Entry
109295288 CDS
T07453
Symbol
IRF6
Name
(RefSeq) interferon regulatory factor 6
KO
K10154
interferon regulatory factor 6
Organism
ggn
Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ggn03000
]
109295288 (IRF6)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ggn04147
]
109295288 (IRF6)
Transcription factors [BR:
ggn03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
109295288 (IRF6)
Exosome [BR:
ggn04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
109295288 (IRF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
109295288
NCBI-ProteinID:
XP_019369603
LinkDB
All DBs
Position
Unknown
AA seq
460 aa
AA seq
DB search
MALHPRRVRLKPWLVAQVDSGLYPGLVWLNREVKRFQIPWKHATRHSPQHEEENTIFKAW
AVETGKYQEGVDEPDPAKWKAQLRCALNKSREFNLMYDGTKEVPMNPIKIYEVCDIPQSQ
GSIINPGSTGSAPWDEKDNDLDDEEEEELNPSQHVPIQDTFPFLNINDSPMAPASVENCS
TEAAWSKNEPVDMEMPPSTLQHDFFSSPELWISSLPMTDLEIKFEYRGKDTGATTTVSNP
QGCRLFYGELGPMPDQEELFGPISLEQVKFPGTEQITNENQKIFTSRLLDVMDRGLILEV
SGHAIYAIRLCQCKVYWSGPCAPSSTTPNLIERQKKVKLFCLETFLSELIAHQKGQMEKQ
PPFEIYFCFGEEWPDGKPRDRKLIVVQVIPVVARMIYEMFSGDFTRSFDSGSVRLQISTP
DIKDNIVAHLKQLYRLLQTHQDTWPMPGPNMQITQPLPAQ
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggcactacacccacggagagttcgtttgaaaccctggctggtagcccaggtggacagt
ggtctgtacccaggccttgtctggctaaatcgggaagtaaagcgatttcagatcccctgg
aagcacgcaacacgacacagtcctcagcacgaagaggagaacaccatctttaaggcttgg
gccgtggaaacaggaaagtatcaggaaggagtcgatgaaccagaccctgcaaaatggaaa
gcccagctccgatgtgctctcaacaaaagccgggaattcaacttgatgtacgatggaacc
aaagaggtgcccatgaaccctattaaaatttacgaagtgtgcgatatcccgcagtcccag
ggatcaatcattaatccagggtccactggctctgctccttgggatgagaaagataatgac
cttgatgatgaggaagaagaagaattaaacccatctcaacatgtccccatacaggacact
tttccgtttcttaatattaatgattccccgatggctccagccagcgtagaaaattgcagc
actgaagcggcgtggtccaagaatgaaccggtagatatggagatgcccccaagtactctg
cagcatgacttcttcagctctcctgagctctggattagctctctccccatgacagatcta
gaaataaagtttgaatatcgaggaaaagataccggggcaaccacaactgtcagcaatccc
cagggatgcaggctgttctacggagaattgggtcctatgccagaccaggaagagctgttt
ggacctattagtctggagcaagtaaagtttccaggaacagaacaaatcaccaatgaaaat
caaaagattttcacaagtcggctgctagatgtcatggacaggggactgattctggaggtc
agtggccatgccatctatgccatccggctatgccagtgcaaggtgtactggtctggacca
tgtgccccttcgtccaccacaccaaacctgattgagaggcaaaagaaagtcaagctcttc
tgtctggaaacatttctaagtgaactgattgctcatcagaaaggacagatggaaaagcag
cccccctttgagatctacttctgttttggggaagagtggcctgatggaaaacctagagac
agaaagctgattgtggtgcaggtcattccagttgtagctcggatgatttatgaaatgttt
tcaggcgacttcacacgttccttcgacagtggcagcgtgcggcttcagatctccacgccg
gatattaaagacaacatcgttgcccatttgaagcagctgtaccgcctcctgcagacccac
caagatacctggcccatgccaggcccaaatatgcagattactcaaccgctcccagcgcaa
tga
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