KEGG   Gavialis gangeticus (Gharial): 109295302
Entry
109295302         CDS       T07453                                 
Symbol
AAAS
Name
(RefSeq) aladin isoform X1
  KO
K14320  aladin
Organism
ggn  Gavialis gangeticus (Gharial)
Pathway
ggn03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:ggn00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    109295302 (AAAS)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ggn03019]
    109295302 (AAAS)
Messenger RNA biogenesis [BR:ggn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     109295302 (AAAS)
SSDB
Motif
Pfam: Beta-prop_Aladin Beta-prop_THOC3 Beta-prop_WDR3_1st Beta-prop_WDR5 WD40_WDHD1_1st ANAPC4_WD40 WD40 Beta-prop_EML_2 WD40_Prp19 WD40_CDC20-Fz Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_IFT140_1st eIF2A Beta-prop_CAF1B_HIR1 PD40 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_WDR36-Utp21_2nd Tricorn_N Beta-prop_WDR75_1st Beta-prop_WDR3_2nd
Other DBs
NCBI-GeneID: 109295302
NCBI-ProteinID: XP_019369627
LinkDB
Position
Unknown
AA seq 517 aa
MCSLALFPPPPLLGDVTLYEGNNALVSGRVLETLPLPFQSQLADLPMLTIPKETLKAHSR
LEHSTKPAFIHHRESLWKRCINAWRDVGVCGVLSEIANAEEEVLQWVKTGSRYALAVCHW
VSSLHGSLFPHLSLTSEDMIAEFSQAVDWAGCSIRAFAWHPHTSKFAVALLDDSIRVYNT
NSATVPTLKHRLQRNVASMAWKPLCASILAVACQSCVLVWHLDPTSLSTRPSSGCAQVLS
HPGHSPVTSLAWAPSGGMLLSASPVDTAMLVWDVSTENCVQLQWFGGGGVTHLAWSPDGS
KVLAATPSAVFRVWEAQMWTCERWPTIKGRCQTGCWSPDGSRLLFTVLGESVIYSLSFSE
YKGEMQGQVGGPKTASIVADLSETTFETLYGEERIGGEVHSMVWDPSGERLAVVIRGNPG
SRTVIAVFRTRNSPVFELLPCGFVQGEQGAQPQLIAFHPCFKKGALLTVCWSTGRISHIP
FFFVGAQFPCFSPSHSPMASLSRSSTRVREQPLFSEL
NT seq 1554 nt   +upstreamnt  +downstreamnt
atgtgctccctggcgctgttccctccgccgccgctgctcggggacgtcaccctctacgag
ggcaacaacgcgctggtctccggccgcgtcttggagacgctcccgctgcctttccagagc
cagttggctgacctgcctatgcttaccatccccaaggagacactgaaagctcacagccgc
ctggagcacagcacaaaacctgccttcatccaccaccgggaatccctctggaaaaggtgt
atcaatgcgtggcgcgatgtgggtgtgtgcggggtgcttagtgagatcgccaatgcagag
gaggaagttctccagtgggtgaagacaggatcacgctatgccctggctgtgtgccactgg
gtttcctctctccatggctccctcttcccccatttgtcgctaacaagtgaagacatgata
gcagagttctcccaggcagtggactgggctggttgctccatccgggcctttgcttggcac
ccccataccagcaagtttgctgtggccctattggatgactctatccgagtgtacaacaca
aacagtgccacagtgcccaccctgaagcatcgcttgcagagaaatgtggcctccatggcc
tggaagccactgtgcgcctctatcctcgctgtggcatgccagagctgcgtgctggtgtgg
cacctggaccccacttccctttccaccaggccttcctctggttgtgcacaggtgctttcc
catcctggtcacagtcccgtcaccagcctggcctgggcgcccagcggggggatgctgctt
tcagcttcgccggttgacacagccatgctggtgtgggacgtgtccactgaaaactgtgtc
cagctgcagtggtttggagggggcggggtcacccatctggcttggtcgccagatggcagc
aaggtgctagctgctacaccctcggctgtgttcagggtgtgggaagcccagatgtggacg
tgtgagaggtggccaaccatcaagggccgttgccagacaggctgctggagccctgatggc
agccgcttgctctttacagttctgggggagtcagtcatttattccttgtccttctcagag
tacaaaggagagatgcaggggcaagtaggagggcccaagacagcatctattgtggcagac
ctgtcagagaccacctttgagacattgtatggggaggagaggattggcggggaagtacac
tccatggtctgggaccccagcggcgagaggcttgcagtcgtcatcagaggaaaccccgga
agcaggacagtcatcgctgtgtttcgtactcgcaacagcccagtgtttgaactcctgcca
tgcggctttgtacagggcgagcagggagctcagccacagctcatcgctttccatccctgc
tttaagaagggggccctcttgactgtgtgctggtctacaggacggatcagccatatcccc
ttcttctttgtgggtgcccagttcccttgcttcagccccagtcacagtcccatggcatcc
ctgagcaggagcagcaccagggtacgggagcagcccctgttctcagagctgtga

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