Gavialis gangeticus (Gharial): 109295520
Help
Entry
109295520 CDS
T07453
Symbol
USP39
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109295520 (USP39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ggn03041
]
109295520 (USP39)
Spliceosome [BR:
ggn03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
109295520 (USP39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
109295520
NCBI-ProteinID:
XP_019369945
LinkDB
All DBs
Position
Unknown
AA seq
529 aa
AA seq
DB search
PEPDRARLKREAESERERARRERAGERERAEGPPRIKREREAEADSDPEPEVTVRYGRFD
PEDRRSRHCPYLDTINRSVLDFDFEKLCSISLSHINVYACLVCGKYFQGRGLKSHAYIHS
VQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDITYVLKPTFTKQQIANLDKQAKLSRAYD
GTTYLPGIVGLNNIKANDYANAVLQALSNVPPLRNYFLEEDNYKSIQRPPGDIMFLLVQR
FGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKKNFQITKQGDGVDFLSWFLNALHAALGG
TKRKKKTIVTDVFQGSMRIFTKKLPHPDLPAEEKEQLLLNTEYQETMVESTFMYLTLDLP
TAPLYKDEKEQLIIPQVPLFNILAKFNGITEKEYKTYKENFLKRFQLTRLPPYLIFCIKR
FTKNNFFVEKNPTIVNFPITNVDLREYLSEEVQATHTHTTYDLIANIVHDGKPSEGSYRI
HVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWKRREDEETIQQGA
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
ccggagcctgaccgcgcgcgcctgaagcgcgaggccgaatccgagcgggagcgcgcgcgg
cgggagcgcgccggggagcgggagcgagccgaggggccgccccgcatcaagcgcgagcgc
gaggccgaggctgactccgacccggagcccgaagtcaccgtgcgctacgggcgcttcgac
cccgaggaccggcgcagccgccactgcccctacctggacaccatcaacaggagtgtcctg
gacttcgacttcgagaagctctgctcgatctccctgtcacacatcaacgtctacgcctgc
cttgtctgcggcaagtacttccagggccgcggcctgaagtcccacgcctacatccacagt
gtgcagttcagccaccacgtcttcctgaatctccatacgcttaagttctattgcctgcct
gacaactatgagatcattgactcctcactggaagacatcacgtatgtgctgaagcccaca
ttcaccaaacaacagattgccaacctggacaagcaggccaagctgtcgcgggcatatgac
ggtaccacctatctgccgggcattgtgggattgaataacatcaaggccaatgactatgcc
aatgctgtgctccaggctctgtccaatgttccaccgctccgtaactacttcctggaagaa
gacaactacaagagcattcagcgcccaccaggagacatcatgttcctgttggttcagcga
ttcggggagctgatgcggaaactatggaacccccgtaacttcaaggcccacgtgtccccc
catgagatgctgcaagctgtggtgctttgcagcaagaagaatttccagatcaccaagcaa
ggcgatggtgtggatttcctctcctggttcctcaatgctcttcacgctgctctaggcggg
acgaagaggaagaagaagaccatcgtgactgacgtcttccagggctccatgcgcatcttc
accaagaagctgccacaccctgacctgccagcagaggagaaggagcagctgctgctgaat
actgagtaccaggaaaccatggtggagtcgaccttcatgtacctgacactggacctgccc
acagccccactctacaaggatgagaaggagcagctcattatcccccaagtgcccctcttc
aacatcctggccaagttcaatggcatcacagaaaaggagtacaagacatacaaggagaac
ttcttgaagcggttccagctgacccgactgccaccctacctcattttctgcatcaagcgc
ttcaccaagaacaacttctttgtggagaagaaccccaccatcgtcaacttccccatcacg
aacgtggacctccgcgagtacctttcagaggaggtccaggccacacacacacacaccaca
tacgacctcatcgccaacattgtccatgatggaaagcccagcgagggctcctaccgcatc
catgtgctgcatcacggcacaggcaagtggtatgagctgcaggacctccaggtgactgac
atcctgccccagatgatcacactctctgaagcctacatccagatctggaagaggcgagag
gatgaggagaccatccagcagggtgcgtga
DBGET
integrated database retrieval system
