Gavialis gangeticus (Gharial): 109295557
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Entry
109295557 CDS
T07453
Symbol
RAB11FIP1
Name
(RefSeq) LOW QUALITY PROTEIN: rab11 family-interacting protein 1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109295557 (RAB11FIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ggn04131
]
109295557 (RAB11FIP1)
Membrane trafficking [BR:
ggn04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
109295557 (RAB11FIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RBD-FIP
C2
Motif
Other DBs
NCBI-GeneID:
109295557
NCBI-ProteinID:
XP_019370027
LinkDB
All DBs
Position
Unknown
AA seq
1415 aa
AA seq
DB search
MSLPGPGSPPGSPRWAPTHVQVTVLQAQGLRPXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXLQLTVLHRALVGLDKFLGRADVPLEPLLHDGGRRHTRWYKLHSKPGK
KEKERGEIEVDIQFMRSNLTASMFDLSMKDKSRSPFGKLKDKLKGKRSSGLSDTASAIVP
SITHSIADSEDESAEKEKKKFKIKTLFSKPGLQKSSLSQSMSALPALQPVTEKVKLRPGD
FKSSWYDDDHEDEKTLTPVSEKNFDGKAEDTTLHPPAVTAYKKTASVDKQLNQTASSNTK
KEGLSLFGGLKSKNDPASRSNVCINGSHVYMEECEAMAKDGTPSSSSSPSPQTFRKKHLY
ASEENLSSKSVKGPEELEKTNRALSGSSSLETFKSLTLPSYKLLSGGDSLESSVPSNADS
TKETKKAALLSLVTGKKELGKNTDVEKLTDVTVKEKDVKGPENQKNESKAEPAEVPTALP
RESPSESSIAAYVPRNKQSLNPFGEEQKPEKPVASARTNQTKVVKPRRGVSSEDETEATL
ATSAPDCLPAFTSAHLASSTSNPFASKVEQNFSAQTSESITSPLVSLSALRSSGKNPFTP
NWGQESKAQDSPSSANSSHPFSASVPKSVVSACLTKNDNNPFTFKGGQDSQKEEFGRSCS
PPLYFSHPAPAVLVHGSSSLPSVYHANDNNPFTSEAGQELEAATSPASLFPPCVASSMRC
STVEHLASSESSSVSSDKPQNETVAGNANTVPKSLGLLSDSSVSQYERAEATPRKQGGSK
GVQIVSALKKNNKGKKKSLTFSLDLEDTCPGNSDEDSDREHPDKCEEVAATGEIVTAERA
GFASAPNTVCVLSPEPCDEQVNSHQNSKRAVWGDMETSNASAETCMGESKEFTSLPKSNS
NLLSGNAEVKASSAMRKINEELETVSEEKRIWSLGMGEQKPVSKSVASPVAEGDLSDQVE
PPKPTPRIRTLLSMEAGKARDVSELSPLFVAPKPAPRNAARKPKCASDSQPSIAKEKEML
SSERTKMASGDVLCREMASDPCENLLSESSLKTAATSAVLSLEGVASNDECLKCSSDHHD
MSLLDCVIDLKPAVPVLGDGSAKPLGLPVILEVGSDDEQLDDNQKGNDMSAPGNSLPKTE
SDPLQFTEEIKQSSSTNSFADKIPGVLHEREENPEDIGESVEPSKLTSGNIFCANSKAGL
DAEVSYSKKCGCDFEESGSINIEEGAGGNLLKPPVSPSSLSSSSQPLSYSQSLQSGTCNS
NRAETPRKPTAEGFDDKAGSAGKKKLLQAWVSPSETHPNQTQQSGGAVSAKHRPHPVKPM
NTTPKSFSITSSVTEKRTEINPKKYDPSDPAYAFAQLTHDELIQLVLKQKDVITKRELQV
RELEDYIDNLLVRVMEETPNILRVSAQINKKAGRM
NT seq
4248 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgccggggccggggtccccgccggggtccccgcgctgggcgcccacgcacgtg
caggtgacggtgctgcaggcgcaggggctgcggcccnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncctgcagctcaccgtgctgcac
cgcgccctcgtcggcctcgacaagttcctgggccgcgccgacgtgcccctcgagccgctg
ctgcacgacggcggccgccgccacacgcggtggtataaacttcattccaaaccagggaag
aaggagaaagagagaggggagattgaggtggatatccagttcatgaggagcaatttgacg
gccagcatgtttgatttgtctatgaaggataagtctcggtctccattcggcaagttgaaa
gacaagttgaagggaaagcggagcagtggactgtcagacacagcatctgccattgttcct
agcataacacactcaatagctgacagtgaggatgagtcagctgagaaagagaagaagaaa
tttaagatcaaaaccctgttttccaagcctggcttgcagaagagctccctctcccagtcc
atgtctgctttacctgcactccagccagtcacagagaaagtgaagcttagaccaggtgac
tttaagtccagttggtatgacgacgatcatgaggatgagaaaacacttaccccagtctca
gaaaagaactttgatggcaaagctgaagatacaacacttcatcctcctgctgttacggct
tataagaaaacggcaagtgtggataagcagctaaaccaaacagcttccagcaacaccaag
aaagaaggactgtctttatttggtggccttaagtccaaaaatgatcctgcctcccgctca
aatgtgtgtattaatggcagtcacgtttacatggaggaatgtgaagccatggcaaaagat
ggcactccatcctcatcctcttccccttcccctcagaccttcaggaagaaacatctgtat
gcatctgaagagaacttgtcttccaaatctgttaaggggcctgaggaattggaaaaaact
aatagagctttatctgggtcttcatctttggagacctttaaatctttgacattaccatcc
tacaaattgcttagtggtggagactctttagaaagcagtgttccttcgaatgctgacagc
acaaaagagaccaagaaagctgccttgttgtctctggttacaggaaaaaaggaattgggg
aaaaacactgatgtagaaaaacttacagacgtaactgtgaaggagaaagatgtcaaaggt
cctgaaaaccagaagaacgagagcaaggcggagcctgcagaagtcccgacagccctgccc
agagagagcccttcagaaagcagcatcgcagcatatgttcccagaaacaagcagtcactc
aacccttttggcgaagaacagaaacccgaaaagcctgtagcctctgcgaggacaaaccaa
accaaagtggttaagcccagacggggcgtgtcttcagaggatgaaaccgaagccacgctt
gctacttctgcacccgattgccttcctgctttcacttctgcacatcttgccagtagtacg
agtaaccctttcgcttccaaagtggaacagaatttcagtgcacaaacctctgaaagcatt
actagccctcttgtatccctttctgcactgcggtctagtggcaaaaaccctttcactcct
aactggggccaggagtccaaagcacaggactccccaagttctgctaattcttctcatcct
ttttcagcttctgttcccaagtcggttgtctctgcgtgtcttactaaaaatgacaataac
cctttcactttcaaagggggacaggactcccaaaaagaagagtttggaaggtcttgcagt
cctcccttgtatttctctcatcctgctcctgctgttttggtgcatggttcttcctctctc
ccctctgtttatcatgctaacgacaataacccttttacctctgaagcaggacaggagttg
gaagcagctacttctcctgcttctctcttccccccttgtgtagcctctagcatgcgctgt
tctacagtggagcatcttgctagctcagagtcctcttctgtttcttcagacaagccacag
aacgagactgtagctggtaatgcaaatactgtgccaaaatctttagggttgctgtcagac
agttctgtatctcagtatgaaagagcagaggcaactccaaggaaacaaggtggtagtaaa
ggggtgcagatagtatcagctttaaaaaaaaataacaaaggaaagaaaaagtccttgacc
ttcagcttagatctggaagatacttgcccagggaacagtgatgaggattcagacagagag
caccctgataaatgtgaagaagtggctgctacaggtgaaatagtaacagccgagagggca
ggatttgcctctgcgcctaatactgtgtgtgtcctttcacctgaaccctgtgatgagcag
gtgaattctcatcaaaacagtaaaagagctgtttggggtgacatggaaactagcaatgca
agtgctgaaacctgtatgggagagagcaaagaatttacttctctccccaaatctaactct
aaccttttatccgggaatgctgaagtaaaggcatcctctgctatgaggaaaataaatgag
gagctagagacagttagtgaagagaaaaggatctggtcactcggcatgggagaacagaag
cccgtatccaaatctgtggcatcccctgttgctgaaggagacttgtcagatcaagtagag
ccacccaaaccaaccccaaggattcgcacattgctctcgatggaagctggcaaggcaagg
gatgtctccgagctcagtcctctctttgttgcaccaaagccagcaccaaggaatgctgcg
agaaaacctaagtgtgcctctgattctcagcctagcatagcaaaagagaaagagatgctg
tcttctgagaggacaaagatggcatctggagatgtgttgtgtagggagatggcctcagat
ccctgtgagaatctgctaagtgagagttcattaaaaaccgctgcaacttcagctgtgctt
tctcttgaaggggtggctagcaatgatgaatgcctaaaatgcagctctgaccatcacgat
atgtcactgttggactgtgttatagaccttaagcctgctgttcctgttcttggagatggc
agtgcgaaacctcttggtcttccagttattctagaagtgggctcggacgatgagcagctg
gacgacaaccaaaagggcaatgacatgtctgcacctggcaacagtcttccaaagactgaa
agtgatccattgcaattcacagaggaaataaagcagagttcaagtacaaactcttttgct
gataaaatacctggagtgcttcatgagagagaagagaaccctgaggatattggtgaatct
gtggaaccatccaaactaacttcaggcaacattttttgtgcaaatagtaaggcaggttta
gatgcagaggtttcttattccaaaaagtgtggctgtgactttgaggaaagtggtagtatt
aacattgaggaaggtgcaggtggtaatcttttgaagccccccgtttctcctagctcttta
tccagttcttcccagcccttgtcttattctcaatctctccaatctggcacttgcaacagt
aatagagcagaaactccaaggaagccaacagcagaaggcttcgatgataaagcaggaagt
gctggcaagaagaagctgcttcaggcatgggtttcaccctctgaaacacatcccaatcaa
acacagcagagcggtggagctgtgtctgctaagcacagacctcatcctgtcaagccaatg
aacaccacacctaaaagcttcagcatcaccagtagtgtgactgaaaaacgcaccgagatc
aacccaaagaaatatgatccttcagaccctgcttatgcctttgctcagctgacgcacgac
gagctgatccagctggtcttgaaacagaaggatgtgattaccaagagagagctccaggtg
cgggaattggaggactacattgacaacctgcttgtcagagtcatggaagaaacccccaac
attcttcgggtttcggctcaaataaacaaaaaggctgggaggatgtga
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