Gavialis gangeticus (Gharial): 109295641
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Entry
109295641 CDS
T07453
Symbol
CNTN1
Name
(RefSeq) contactin-1 isoform X1
KO
K06759
contactin 1
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
109295641 (CNTN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ggn04515
]
109295641 (CNTN1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ggn00537
]
109295641 (CNTN1)
Cell adhesion molecules [BR:
ggn04515
]
Immunoglobulin superfamily
Contactins
109295641 (CNTN1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ggn00537
]
Others
109295641 (CNTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
ig
Ig_2
V-set
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Tissue_fac
Motif
Other DBs
NCBI-GeneID:
109295641
NCBI-ProteinID:
XP_019370129
LinkDB
All DBs
Position
Unknown
AA seq
1006 aa
AA seq
DB search
MKMWLLIGHLVTVPFIFCLSEEGNKGYGPVFEEQPIDTIYPEESSDGQVSMNCRARAIPF
PTYKWKINNWDVDFTKERYSMVGGRLVINNPEKSKDAGKYVCIATNMFGTVRSSEATLSF
GYLDPFPPEERYEVKVREGVGVVLLCEPPYHYPDDLSYRWLLNEFPVFITMDKRRFVSQI
NGNLYIANVEASDRGNYSCFVSSPSITKSVFSKFIPLIPQSDGAKVYPADIKVKFKDTYA
LLGQNVTLECFALGNPVPGIRWSKYLEPMPATAEISMSGAVLKIFNIQYEDEGIYECEAE
NYKGKDKHQARVYVQASPEWVEHINDTEKDIGSDLYWPCVAAGRPIPTIRWLKNGLSYGK
GDLRIRGLTFEDAGMYQCIAENAHGIIYANAELKIVASPPNFELNPMKKKILAARGGRVV
IECKPKAAPKPKFSWSKGTELLVNGSRIHIWDDGSLEILNITKLDEGTYTCFAENNRGKA
NNSGTLEITEATKITLAPINVDVTVGENATMQCIASHDPSLDLTFIWSLNGYVIDFEREH
EHYERSVMIRSNGELLIKNVQLRHAGRYICTAQTIVDNSSASADLVVRGPPGPPGGIRVE
DIRDTSVALTWSHGTDNHSPISKYTIQYKTFLAEEWKDAKTDPPNIEGNTESARVIDLIP
WMEYEFRIIAVNTLGTGEPSMPSQRIRTEGAPPNVAPSDVGGGGGSNRELTITWVPLPRE
YHFGNNFGYVVAFKPFGAKEWRRVTVTNPDIDRYVHKDESMPPSTKYQVKVKAFNNKGDG
PFSLTAVIYSAQDAPTEIPTDVNVLVLSSSEISVSWHHISDESVEGYQIRYRAAHDKEAA
AQRVQVSNQEYSTKLEGLRPNTWYHVDVSAYNSAGYGPPSRAVDIVTYKAPPSQRPRIIS
SVRSGSRYIITWEHVKPMPNESAVSGYKVLYRPDGQHEGKLYSTGKHSIEVPVPRDGEYV
VEVRAHSKGGDGEVAQIKISAASVGASPGLLGLLLPTIGVLAYLEF
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgtggctcttaatcggtcatcttgttacagtgcctttcatcttctgcctgtca
gaggaaggaaataaaggctatggacctgtttttgaagagcagcctattgataccatctac
ccggaggaatcatcagatggacaagtatcaatgaactgccgagccagagcaatccccttt
cctacttacaagtggaaaataaacaactgggatgttgacttcacaaaggaacgctacagc
atggtgggaggcagacttgttatcaataacccagaaaaatcaaaggatgctggaaaatat
gtttgtatagcaacaaatatgtttggaacggtcagaagcagtgaagctactctaagtttt
ggataccttgatccttttccccctgaggaacgctatgaagttaaagtgcgggagggtgtt
ggagtagtgcttctttgtgagcctccttaccattacccagatgatctcagttatcgctgg
cttctgaatgagtttcctgtattcattactatggacaaacgacgatttgtgtcacagatt
aatggcaatctctatattgcaaatgtagaagcatcagatagaggcaattattcatgtttt
gtatccagtccttcaatcacaaagagtgtattcagcaaattcattccacttattccccaa
tcagatggtgctaaagtatatcctgctgatatcaaggtcaagttcaaggatacatatgcc
cttcttggacaaaatgtgaccctggaatgttttgcgctcgggaaccctgttcctggaatc
agatggagtaagtatcttgaacccatgccagccactgctgagataagcatgtctggtgca
gttctcaagatcttcaatattcagtatgaagatgaaggaatttatgaatgtgaagctgaa
aactataaaggaaaagataaacatcaagcacgagtttatgttcaagcatctccagaatgg
gtagagcatatcaatgacacagagaaagatataggcagtgacctatattggccttgtgta
gctgcaggaagaccaattccaaccattaggtggttgaaaaatggactatcgtatgggaaa
ggagatttaagaatacggggcctgacttttgaggatgctggaatgtatcaatgtatagca
gaaaatgcacatggaattatttatgctaatgccgaactgaagattgtagcttcacctcct
aattttgaactgaacccaatgaaaaagaagatcttggctgctagaggaggccgtgtggta
attgaatgcaagcctaaagctgctcccaagccaaaattctcatggagcaaaggaacagaa
ctgctggtaaatgggagccgtatacacatttgggatgatggaagcctagaaattttgaat
atcacaaagctggatgaaggcacttatacatgttttgcagaaaataaccgaggaaaagct
aacaattctggtactcttgaaatcacagaagctacaaagattactttagctccaattaat
gttgatgtcacagtgggagagaatgccactatgcagtgtattgcatcccacgacccctcg
ttagacctgacatttatttggtctctaaatggctatgtaatagattttgagagagaacat
gaacattatgaaagaagtgttatgatcaggtccaatggtgagcttcttattaaaaatgta
cagctccggcatgctggaagatacatatgcaccgcacagacaattgttgacaactcctca
gcttcagctgatcttgttgtaagaggtcccccgggtccccctggagggataagagtggag
gatattcgagacacttctgtagcactcacctggagtcatgggacagataaccatagccct
atttctaagtacactatccagtacaagacttttctagctgaagagtggaaagatgccaaa
acagatcccccaaacattgaaggaaacacggaaagtgcaagggtgattgatttaatccca
tggatggagtatgaattccggataatagcagtgaatactttgggaacaggagaacctagt
atgccatcacagagaattagaacagaaggagctcctcctaatgtggctccttctgacgtt
ggaggaggaggtggaagcaatcgagagctgactataacatgggtgcctttacctagagaa
taccattttggcaataattttggttatgtagtagcattcaagccatttggggcaaaggag
tggagaagagttacagtgaccaatccagatattgaccgatacgtccacaaggatgaatcc
atgcccccctcaacaaagtatcaagtaaaagtgaaagcatttaacaacaaaggggatggg
cctttcagcctcactgctgttatttattcagcacaagatgctccaactgagatacctaca
gatgtgaacgtcttagttctatcatcttctgaaatctctgtttcttggcaccacatttct
gatgaatctgttgaaggatatcagattcgttaccgggccgctcatgataaagaagcagct
gcccagagggtgcaagtgagcaatcaggaatactcaaccaaactggaaggcttaaggcct
aacacatggtatcatgtggacgtttctgcctacaatagtgcagggtatggacctcccagc
agagctgttgatattgtcacatataaagcacctccaagtcaacgtccaagaattatcagt
tctgtaaggtctggttcaaggtacatcatcacttgggaacacgtcaagcccatgccaaat
gaatcagcagtttctggatacaaagtgctgtatcgaccagatggccaacatgagggcaaa
ttgtattcaactggtaaacattcaatagaggtcccagtccccagagatggtgaatatgtg
gttgaggttcgtgcacacagtaaaggaggagatggagaagtagctcaaatcaaaatttca
gctgcttcggtcggtgcatcgcctggtctccttggcctactgctgcctaccattggtgtc
cttgcctacttggaattctga
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