Gavialis gangeticus (Gharial): 109295644
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Entry
109295644 CDS
T07453
Symbol
PDZRN4
Name
(RefSeq) PDZ domain-containing RING finger protein 4
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
ggn
Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ggn04121
]
109295644 (PDZRN4)
Enzymes [BR:
ggn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109295644 (PDZRN4)
Ubiquitin system [BR:
ggn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
109295644 (PDZRN4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
109295644
NCBI-ProteinID:
XP_019370134
LinkDB
All DBs
Position
Unknown
AA seq
777 aa
AA seq
DB search
MGCNLCTFQKREEHYKLLYEVSQVNGKDLSKATHEEAVEAFRNAREPIVVQVLRRAPINK
AHSCPQDVQLVDASTQTDITFEHIMALAKLRPSTPPVPDICPFLLSDSCHSLHPVEHEFY
EGNDYLSSLPADADRTEDFEYEEVELCRVSSQEKLGLTVCYRTDDEEDTGIYVSEVDPNS
IAARDGRIREGDRILQINGQDIQNREEAVALLSSDECKKIVLLVARPEMQLEEGWLDDER
NEFLEELNLEMLEEQHNEAMQYTANEVEQPKKHEEEDGTTDTATSSSNNHEKDSGVGPTD
ESLRNDESSEQENAPEEQSTAALQSKRELGQSQDTLGSVELQCNESFVSGEYIESDFVRN
QDEDCERFRQLLELKCKIRNHGEYDLYYSSSTIECNRKEQDGVEHELQLLNEELRNIELE
CQNIMQAHRLQKVRDQYGDIWSLHDGGFRNYNTSIDVQRGKLDDIIEHPEKSDKDSSSAY
NTAESCRSTPLTVDRSPDSSLQRMISITNRKNLRSTIVANQLSSGQSSREATPTKTKTTE
QSSTVEDKVMVSESSKFTDQEKQSAENIPYLSPYHSSSYRYGNIPAHAKHYQSYMQLIQQ
KSAVEYAQSQLSLVSMCKDSSKCTEPKMEWKVKIRSDGTRYITKRPVRDRILKERALKIK
EERSGMTTDDDTMSEMKMGRYWSKEERKQHLVRAKEQRRRREFMMRSRLECLKESPQSGS
EGKKEINIIELSHKKMMKKRNKKILDNWMTIQELMTHGAKSPDGTRVHNAFLSVTTV
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcaatctgtgcacttttcagaagagagaggaacactacaaactgctctatgaa
gtttcacaggtcaatgggaaggacctctccaaggctacacatgaagaggcagtggaagct
tttcgcaatgccagggagccaattgtagttcaggttttacggagagcacccattaataaa
gcacatagttgcccacaggatgttcagcttgtggatgctagcacccagactgacatcacc
tttgagcacattatggctctggccaagcttaggccatccacacctccagtacctgatatc
tgcccttttttactttcagacagctgccattcgcttcacccagtggagcatgaattttac
gaaggtaacgactatctttccagcctgcctgctgatgcagatagaacagaagacttcgag
tatgaggaggttgagctctgtcgtgtaagcagtcaagagaagttggggctgactgtctgt
tacagaacggatgatgaggaggacacaggaatctatgtcagtgaggttgatccaaacagt
attgctgccagagatggccggatccgagaaggagaccgcattttgcagataaatggccaa
gacatccagaatcgagaggaggcagtggcattgctctccagcgatgaatgcaagaaaatt
gtgttgctggttgcaagacctgagatgcagctggaggaagggtggctggatgatgaaagg
aacgagttcttagaggagttaaacttagaaatgttggaagaacagcataatgaagcgatg
cagtacacagccaatgaggtggagcagccaaagaagcatgaggaagaggatggcacaaca
gacaccgcaacttcttcatccaacaaccatgagaaagacagtggagtggggcctacagat
gagagtctacgtaatgatgagagctcggagcaggagaatgcacctgaggagcagagcact
gctgccctacaaagcaagcgggagctgggccagagccaggatactttaggaagtgttgaa
ctccaatgcaatgaaagctttgtgtctggggaatatattgaatcagattttgttagaaac
caagatgaggactgtgaaaggtttcggcaactcttggaactcaaatgcaagattagaaac
cacggtgaatatgacttatattactcaagcagtacaatagagtgtaacagaaaggaacaa
gatggggtggagcatgagctacagttactcaatgaggaattgaggaatattgaactcgag
tgtcagaacattatgcaggctcacaggcttcaaaaggtgagggatcagtatggagatatt
tggtccttacatgatggaggattcaggaattataacaccagcatagatgtacaaagaggt
aagctggatgatatcatagagcaccctgagaaatctgacaaagatagctccagtgcttac
aacacagcagaaagctgcaggagcactccactgactgttgaccgatctcctgatagctca
ctccagagaatgattagcatcaccaataggaaaaacttgagaagcacaattgtagctaac
cagttgtcttctggacagagtagcagggaggcaaccccaaccaaaaccaaaactactgag
caaagcagtactgttgaagataaggtaatggtttcagaaagcagcaaattcacagaccag
gagaagcaaagcgccgagaacattccttacctatctccatatcacagttcatcatacaga
tatgggaatatacctgcacatgcaaaacattatcaaagctatatgcagctgatccaacag
aaatctgctgtagagtatgcccaaagtcagctcagcctagtgagcatgtgcaaagattca
tcgaagtgtacagaaccgaagatggaatggaaagtgaaaataagaagtgatggaacacga
tatatcacaaagagaccagtacgagacagaatcctgaaggaacgtgccttaaaaattaaa
gaggagcgcagtggaatgacaacggatgatgatacgatgagcgaaatgaaaatgggacgt
tactggagcaaagaggagcggaagcagcatttggtgagagctaaggagcagaggcggcgg
cgagagttcatgatgcggagcaggttagagtgtcttaaggaaagtccacaaagtggcagt
gagggaaaaaaagaaattaacattattgaactcagtcacaaaaagatgatgaaaaagagg
aacaagaaaattttggacaactggatgacaatccaagaactaatgacacatggtgctaag
tctccagatggcacaagagtgcacaatgcctttctatcagttactactgtatga
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