KEGG   Gavialis gangeticus (Gharial): 109295783
Entry
109295783         CDS       T07453                                 
Symbol
POC1B
Name
(RefSeq) POC1 centriolar protein homolog B isoform X1
  KO
K16482  centriolar protein POC1
Organism
ggn  Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:ggn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ggn03036]
    109295783 (POC1B)
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:ggn03037]
    109295783 (POC1B)
Chromosome and associated proteins [BR:ggn03036]
 Eukaryotic type
  Centrosome formation proteins
   Centriole proteins
    109295783 (POC1B)
Cilium and associated proteins [BR:ggn03037]
 Primary cilia and associated proteins
  Other primary cilia associated proteins
   109295783 (POC1B)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_IFT122_1st ANAPC4_WD40 Beta-prop_EML Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_TEP1_C NBCH_WD40 Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_RIG_2nd eIF2A Beta-prop_SCAP Ge1_WD40 RMC1_N Beta-prop_WDR35_TULP_N Beta-prop_Nup120_160 Beta-prop_DCAF4 Beta-prop_NWD2_C Beta-prop_HPS5 Beta-prop_SPT8 Beta-prop_IP5PC_F Beta-prop_RIG_1st Cytochrom_D1 Beta-prop_NUP159_NUP214 Beta-prop_WDR75_2nd KNTC1_N THSD1_N
Other DBs
NCBI-GeneID: 109295783
NCBI-ProteinID: XP_019370389
LinkDB
Position
Unknown
AA seq 440 aa
MIWKLKPQSRAFRFVGHVEAVNSVQFSPDGQLLASASQDRTVRLWVPCIHGESSVLKAHT
AAVRSVNFSHDGRFLVTASNDKSIKIWSVHRQRLLFSLSQHTHWVRCAKFSPDGRLIASC
SEDKTVRIWDTTNKVCVDSFTDCEGYANFVDFNPSGTCVVSAGSNHTVKLWDIRMNKLLQ
HYKVHRAEVNCVSFHPSGNYIITAASDGTLKILDLLEGRLIYTLHGHKGPVLSVAFSKGG
EKFASGGADSQVLLWNTNFDAFNRKEVLKHHLRRTHTDDPPHLLDIYPRSPHPHDVKSQS
IEINPNFDVTDLQTLDPPVIDIGFSSSFSSPTRTTGSSNSISTFKDDVNSEDPQYPPASF
SPTSSRRKLEDENESAVCSTDKKTGISPAVGNALEHIVEQLDVLTLTISILEQRLTLTED
KLKECLENQQKILLQSRQGE
NT seq 1323 nt   +upstreamnt  +downstreamnt
atgatatggaagttgaagccacagtccagagctttcagatttgtgggtcatgtggaagct
gtgaatagcgtacagttttcaccagatggacaactactggcctcagcttctcaagaccgt
acagttagactgtgggttccatgtattcatggagaatcttcagtactaaaagcccatact
gcagctgtccgtagtgtgaacttctcacatgatggccgctttctagtgacagcatccaac
gacaagtcaataaaaatatggagcgttcaccgtcagcggcttttgttttctttgtcccag
catacacactgggttcgctgtgccaaattttcaccagatggaagattaatagcatcttgc
agtgaagataaaactgttagaatctgggatacaacaaataaagtgtgtgtcgatagtttc
acagactgtgaagggtatgccaattttgtggatttcaatccaagtggtacatgtgtagtt
tctgcgggttctaatcatacggtgaaactctgggatattcgaatgaacaagttactgcag
cattacaaagttcacagagcagaagttaattgtgtatcattccatccttctggtaactat
atcatcactgctgcttctgatggtacccttaagattttggaccttttggaaggaagactc
atatatacactccatggacacaagggacctgtcctttccgtggccttttcaaaaggtggt
gaaaaatttgcatcaggcggagctgattctcaggtcttgctgtggaacacaaattttgat
gcattcaatcgcaaggaagttcttaaacaccaccttagaagaacacatacagatgatcca
ccccaccttcttgacatttatccaagatcacctcatccccacgatgtgaaatctcagtca
attgagatcaatcctaactttgatgtgactgatttacaaacgcttgatccacctgtcata
gatatcggtttttcctcatctttcagttctccgacaaggacaactggatcttcaaatagc
atttccacgttcaaggatgatgtgaatagtgaagatccccagtatcctccagcctcattc
tctccaactagctcaagaaggaagctggaggatgagaatgaatcagctgtgtgtagtaca
gacaagaaaactggcatctccccagctgtgggtaatgctttggagcatatagtggagcag
ctggatgttttgactctgactatttcaatcctggaacagcgactaactttgactgaagat
aaattgaaagagtgcctagaaaatcaacaaaaaatattactacaaagtaggcaaggagaa
taa

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