Gavialis gangeticus (Gharial): 109295876
Help
Entry
109295876 CDS
T07453
Symbol
UTP20
Name
(RefSeq) small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
ggn
Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ggn03009
]
109295876 (UTP20)
Ribosome biogenesis [BR:
ggn03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
109295876 (UTP20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
GAIN_ADGRG2
Motif
Other DBs
NCBI-GeneID:
109295876
NCBI-ProteinID:
XP_019370537
LinkDB
All DBs
Position
Unknown
AA seq
2809 aa
AA seq
DB search
MKNKSASHKAANTHRFLTFSERLGNVNIDIIHRIDRTGSYAEDVETYFYEGLQKWKELNL
THHFVKFYREVINKCQSFNQLVYYQSAVVQSLKTHLQIKGSLAYQPLLDLVVHLARDLQT
DFYPHFPDFFLAITKLLDTQDTELLEWAFTSLSYLYKYLWRLMVKDISNIYSLYSTLLAH
NKPHIRNFAAESFTFLMRKVSDKNALFNLMFLDLREHPEKVEGVGQLLFEMCKGVRNMFH
SCAETAIKLIMLKLGPVTEAEVELPWIVVGEAFKYMVKSAAVYIYKEHFDVLFSCLQDSV
IELQKKITKTNSSESSAQFEMILQVYLILAEHGNGSKISQPEAVCKTLTTMLQTPDLSAS
CCETLLKAISALLLAENVFLPDALTKETIEKVFRSGFERHNLLNFSEAMFAMKQFERHFL
PCFLEYIEHCFSGEDVQASNEALAILAKLILVKAEPPTVGSMAFEKYPLVFTQSSIGAST
RQQKNKSNGERSLAPVLDHILSLIQLPGNEDVTNLSHSWAALVVLPHIRPIDKEKIVPPV
TRFIESLFVAIDKGGLCKESLFVACQAVSTLLSLSESSEILLLLPVERVKSLVTTFPSDP
SVLLLADLYYTRLALCGCQDPLSQGNLMDLFDKLLTNLSTSLSKVRLLTVRILSHFESLL
PTPTEGDGPGELQSVFALLLQAELVPATVNDYREKLLHLRKLRCDVVQAAIPEGPLREVP
LRYLLGMLYVNFSPLWDPVIELIISHASEMENKQFWKVYYEHLERAATYAERELQSELEE
EQEHTAETENEKISGGDVRTLHLEQLRLRTDCSERMDHANFRFLLWKALAKFPDRVEPRS
RQLSPLLLRFISNEYYPADSLVAPTQDLRKKNNGAVEEEKPAEEINQTTMEEEGEEGKEE
GEVERPAVEELVVEVFQKKKTRRAAAKQLIAHLQVFSKFSNPRALYMEPKLNELYTQLLS
HQDQNVQKIALDCIMTYKHPHLLPYRENLQRLLEDKSFKEEIVHFSISEENTIVKMQHRP
DLVPILMRILYGRMRNKTGSKTQGKSAAGTRMSIVLRFLAGSLPEEIRMFLDLLFEPVKH
LSNGPCQMAVLQTVSQLDLSKVLPLGRQHSLFNSLEVVLKNMGHLISQYLSEILQILLCM
TATISYSLQQREKIQLRFINPLKNLRRLGIKLVAAFFSDFETYSFSSEETDAVFHAVIWP
QISRLASESQYSPTLLLKLIHIWSKNPRYFPLLAKQRPGHPECDILSNVFALLSAKSLSE
STANVVMDVTDNLLNSPEFEPTELLPSLTVNDCVFRDTDEMTEESPSLGVRLILPHVPVI
LQYLSKTMLNVEKVKKKKFRAQVSKELNILSNISKFIQDKGQSSVLISLLLPFLHQSNIM
QDTEIDILETVQNLLRHCSNPTSFLKPLAKLFSVIQNKLSRQTLCLVFQTLSDFESDLKY
ITDVVKLNAFDQRHLDDIDFDVRLSAFQAIASRIKEMQEVDINFIIPVMHNCFYTIQLGD
MSLSDSASLCLTSIIRRLAEIEHTEDEYKEIIQHTLLEALRKGLKSKTESIQQDYTSLLS
CLIQTFPKHAEFQDLVQLTDCHDPEMDFFENMKHIQIHRRARALKKLAKHISEDKIALSS
KSLQNYIMPYATTTIFDEKMLKHENMITASVEVVGAVCRHLSWSAYMYHLKHFIHVLQTG
QINQKLGVSLLVTVLEAFHFDHETLEKRLETIQNEDADIMDVEQGAENEEAMELEQSGGE
EAPAEEEKDQNIPEDGGNQNDPAQIQPEQAVTKESEGIQKVVKSISSLPRNKEELECLIK
HIQETVIENILPKLQRCLAAKVKRDEEHKLVKSKVVNDEEVVRVPLAFAMVKMMQSLPQE
VMEANLPSILLKVCLLLRNRAQEIRDIARNTLTKIIEALGAQYLQYILKEMQSTLVHGYQ
VHVLTFTVHLLLKGLTSRLHAGDLDPCLDILIEIFNQELFGDIAEEKEVRGIVSKVMEAR
QSKSYDSYEILAKYIGKDQVTKLILPLKEILENTTSLKISRKVNETLRRIMAGLILNPEM
NAESVLLLSHGLISENLPLLTEKAKTKAAPPSDPRLQPESCLLLPPTPSRGGQKAPVSSK
TNMYILVDSGLRLLHMSLKRSKINSSEERVLEMLDPFVQLLINCLQSRDVKVITGALQSF
VWILKFPLPSIEKNLEQLTKQLFLLLKDFAKAGAAKGQNFHLVVNCFKCVTILVRNTKSH
ITDKQLQVLLGYAEEDIYDSSRQATAFGLLKAIVSRKLIVPEIDAVMQKVAKLAVTGQGE
PVRVQCRQIYLKYILDYPLGDKLRPNLEYIFAQLNYDYETGRESALEMIAYLFEMFPQGL
LHIYCGLFFVPLCMMMINDDSAKCKKMAAIAGKSLLSKINSTKRDLMFSLVTTWFNSEKS
SHKRLAAQACGLFVEAEGVEFQRRLGVVLPLIEKEIDPLKFDDISEEAEEKAADRLLFSF
LILITKLIKECNIIELTNHNEILSNIWCHVQSHLRYPHSWVWLTAAQIFGLLFASHKPEK
LVSKWKEGKAGKKRSAMSEPSASTFLTDELDKKMKELALAFCHQLQSKFLDQSLGEQVIK
NLLFVAKVLYLLAPDSEKDEESKDEMHCETGAQDASEAEGEEAPAQEEKDSEEAEEKSRP
ATLLWVMKKLSLMAKREAAYSPKSPLKRTCILKFLGAVAMDLGKDRIKSYLPTIITPLHR
ELSSTYAEQDPTLKNLSQEIIELLKKLVGLETFSLAFASVQKQANQKRAIRKKQRALQTV
ANPDIAARKKLKKHKNKIEAKKRKIEFLRPGYKAKKPRSHALKDLAMVE
NT seq
8430 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacaaatccgcctcccacaaggcggccaacacgcacaggtttctcaccttttca
gaacgcttaggcaatgttaatattgatattattcatcggatcgacaggactggaagctat
gctgaggatgttgaaacctatttttatgaaggactgcagaaatggaaagagctgaacctc
acccatcatttcgtaaagttctacagggaagtgattaacaaatgccagtcattcaaccag
ctggtatattatcagagtgctgttgtgcaaagcttgaagactcatctgcaaatcaaaggc
agtcttgcttatcaaccccttctggacctagtggttcacctggctcgagatctgcaaaca
gatttctaccctcacttcccagacttttttctggctattaccaagttgctggatacccag
gacacagagctgctggaatgggcttttacttctctttcctatctttacaaatacctgtgg
agattaatggtgaaggatatatccaacatatatagtttatacagtaccctgttggctcac
aacaaaccacacatcagaaattttgctgctgaaagctttacctttttaatgaggaaggtt
tctgataaaaatgccctgttcaatttaatgtttctggacttgagagagcacccagaaaag
gtggaaggtgtcgggcagttgcttttcgagatgtgcaagggggttagaaacatgttccac
tcttgtgcagagacagctataaagttaattatgctaaagctgggtcctgttacagaagct
gaagttgaacttccatggattgttgttggagaagccttcaaatatatggtaaaatcagct
gcagtgtacatctacaaggagcattttgatgttctcttcagttgtttgcaagactctgtc
atagaattgcaaaagaaaataactaagaccaactcttctgagagttcagcacaatttgaa
atgatattgcaagtatatctgatcctagcagagcatggaaatgggtccaaaatctcacaa
cctgaagcagtttgtaagacattaacgacaatgttacaaacgccggatctctcagcatcg
tgttgtgagaccctgcttaaagccatttctgccttgcttcttgctgaaaatgtgtttctg
ccagatgctttgactaaggaaactattgagaaggtatttagaagtggatttgaaagacac
aaccttttgaatttctctgaggcaatgtttgcaatgaaacagtttgagaggcattttctt
ccatgctttctggagtacattgagcactgcttctctggagaagatgttcaggctagcaat
gaggccttagcaattctggctaaacttattctggtgaaagcagaacctcccacagttggc
tcaatggcttttgaaaagtatcctcttgttttcacacagtcatccataggggccagtaca
agacagcagaaaaataagagcaatggagaaaggtcactagcgccagtgctggatcacatt
ctatctctaattcagttaccaggaaatgaagacgttactaatctttcacactcttgggct
gcccttgtggtacttccacatattagaccaatagacaaagaaaaaatcgtgccaccagtc
accaggtttatagaatccctcttcgtggctattgacaaaggaggcctctgcaaagaaagc
ctgtttgtggcctgccaagctgtaagcacactacttagtttatcagaatcttctgaaatt
ctccttttgttacctgtggaacgtgtgaagagcttggtgaccaccttcccttcagatcca
tcggtcttgctgttggctgatctgtattacaccaggttggcactgtgtggttgccaagat
ccactttcccaagggaacttaatggatttgtttgataaattgctcacaaatctttccacc
agcttatccaaggtccggctcttgactgtaaggattttaagccattttgagtctctgctg
cctaccccaactgagggtgatggaccaggtgagcttcagtctgtgtttgccttattactt
caagctgaactcgttccagcgactgtaaatgattacagggagaaacttctgcatttaaga
aaactcagatgtgatgtggtgcaggctgcaataccagagggaccattacgtgaggtgcct
cttcgatatttattgggaatgctttatgttaacttcagtcctctctgggatcctgttatt
gagcttataatttctcatgccagtgaaatggagaataaacagttttggaaagtgtattat
gaacacctggagagagctgctacttatgcagaaagggagttgcaaagtgagttggaggaa
gagcaggaacacactgcagaaacagagaatgagaagatctcaggaggagatgtgaggact
ctgcatttggagcagctgaggctcagaacagattgcagtgagaggatggatcacgcaaat
ttccgttttctactgtggaaagcgttggccaagtttcctgacagagtggagccccggtca
aggcagctttccccacttctcttgagattcattagcaatgagtattacccagcagattca
ctggtagctcccacccaggatcttagaaagaaaaataatggtgcagtagaagaagaaaaa
cctgctgaagaaataaatcaaactacaatggaggaggaaggggaggagggaaaggaagag
ggagaagtagaaagaccagcggtggaagaactggtggttgaagtgtttcagaaaaagaaa
acgagaagagctgctgctaagcaactaatagcccatttgcaagttttctctaaattttca
aatcctcgagcactgtatatggagccaaagttgaacgaattgtatacccagttgttgtct
catcaagaccaaaatgtccaaaaaatagcccttgactgtatcatgacttacaagcatcca
cacttgcttccatatagggagaacttgcagcggttactggaagacaagagctttaaagaa
gaaatagtccatttcagcatatctgaggaaaacaccatagttaaaatgcaacaccgacca
gatcttgttcctatccttatgagaattctgtatgggcggatgagaaacaaaactggaagc
aaaacacagggcaagtctgctgcaggcactcggatgtcaattgttttgaggttccttgct
ggttcgctgcctgaggaaattcgtatgttcctggatctgctctttgaacctgtgaaacac
ttaagcaatggaccttgccagatggcagtgctccaaacagtatcgcaactggatttatct
aaagtcctgcctctaggtcgtcagcacagtctgttcaatagccttgaggttgtattgaaa
aacatggggcatctgatcagtcagtatctatctgagattttgcagattttactgtgtatg
acagcaaccatatcctacagccttcagcaaagagagaagatccaactaaggtttatcaac
ccattaaaaaatttaaggcgtcttgggatcaaactcgtagctgcgtttttttctgatttt
gagacctacagctttagctcagaagagactgatgcagtttttcatgcagttatctggccc
cagatcagcaggcttgcttctgagagccagtattctcccactctgctgctcaaactcatt
catatctggagcaagaatcccaggtacttccctttgctggccaagcagagaccaggacac
ccagaatgtgatatactgtcaaatgtctttgccctgctctcagccaagagcctgtctgag
tccacagccaatgttgtgatggatgtgactgacaacctcctcaacagcccagagtttgaa
cccacagagttgcttcctagtttgactgtgaacgactgtgttttcagagacactgatgaa
atgacagaagagtcgccaagcctgggtgtccggttaattctacctcatgttcctgtcatc
cttcagtatctcagcaaaactatgttaaatgtggagaaggtgaaaaagaaaaagtttaga
gcccaagtgagcaaagagctcaacattctttccaatatcagcaagtttatacaagacaag
ggtcagagttctgtactcatcagtctcctccttcctttccttcaccagagtaacatcatg
caggatacagagattgacatcctggagaccgtgcaaaatttgctgaggcactgctcaaac
cccacaagcttcctcaaacctctggcaaaacttttctctgtaattcagaacaaattatct
cgacagacgctctgtttggtgtttcagactttatctgatttcgagagtgacttgaaatac
attacagatgtagttaagctgaatgcctttgatcaacggcatcttgatgatatcgacttt
gatgttcgcttgtcagcattccaggcaattgcttctcgtattaaagaaatgcaagaagtg
gatatcaactttatcattccagttatgcataattgcttctataccattcagttgggggat
atgtccttaagcgacagtgccagcctgtgtttgactagcattatccgtcggctagcagaa
attgaacacacagaagatgaatacaaagaaataatccagcacactctcctggaagctctg
agaaaaggtttgaaaagcaaaactgaaagcattcaacaagactacacatcattgctttcc
tgcttgattcaaacgtttccaaagcatgctgagtttcaagacttggtccagctgactgac
tgccatgaccctgagatggacttctttgagaacatgaagcatattcagatccacagaaga
gcacgagccttaaagaaattagctaagcacataagtgaagacaagattgctctgtcctcc
aagtctctgcaaaattacatcatgccttatgcaactacaactatttttgatgagaaaatg
cttaagcatgaaaatatgataactgcttcagttgaagttgtaggagctgtttgcaggcat
ctctcttggtcagcttatatgtaccatttaaagcatttcattcatgttttacaaactgga
cagatcaatcaaaaactgggtgtgagcttgttagtgaccgtactagaagcttttcacttt
gaccatgaaacacttgaaaagcgtcttgagacaattcagaatgaggatgcagatatcatg
gatgttgagcagggagcagagaacgaagaagccatggaactggagcagagtgggggggag
gaggcaccagctgaggaagagaaggaccagaacatccctgaagatggtggaaaccagaat
gacccagcacaaattcagcctgaacaggcagtcactaaagaatctgagggcatccagaaa
gtggtcaaatctatttcttcccttcccagaaataaggaagagctggagtgtctgataaaa
cacattcaagaaacagtaattgagaacatcttgcccaagttacagaggtgtcttgcagca
aaggtgaaaagagatgaggagcacaagctcgtgaaatccaaagttgtaaatgatgaagag
gttgttcgagtccctttagcttttgcgatggtcaaaatgatgcagtctctgccgcaggag
gtgatggaagctaatctaccaagcattctcctgaaagtctgcttacttctgaggaacaga
gcacaggaaatccgggacattgcacggaacaccctcactaaaataatagaagctctggga
gcccagtatctgcaatacatcctaaaagagatgcagtcaactcttgtccatgggtaccag
gtccacgtgctgactttcactgtgcatctcttactgaaaggccttaccagtaggctgcat
gctggtgatctggacccttgcttagacattctgattgagattttcaatcaagagctgttt
ggagatattgctgaagaaaaggaggtcaggggaatcgtctccaaggtcatggaggctcgg
caaagcaagagttatgattcctatgaaatccttgccaagtatatagggaaagaccaagtg
accaaacttattctgccattaaaagagatcttagagaataccacgagcctgaagatatcc
cgcaaggtgaatgaaacattgcgtcgcattatggcaggattaattctgaatccggaaatg
aatgcagaatctgttctcctgctcagccatggcctgatcagtgaaaatctgcctctgtta
actgaaaaggcaaaaactaaagctgcacctccttcagatcctcgtctgcaaccagaaagc
tgcctgctcctcccacctactccaagtcgaggaggacagaaagcacctgttagcagcaag
actaacatgtatatcttggttgactcaggactccggctgctgcacatgagtctgaagaga
tccaaaattaattcttcagaggagcgcgttttagaaatgctggatccttttgttcagctg
ctgataaactgcctacagtccagggatgtgaaggtgatcactggtgctctgcagtctttt
gtgtggattttaaagttccctttgccatctattgaaaagaacctggagcagctcaccaag
cagctattccttctgctgaaagactttgccaaggcaggagcagccaagggccagaacttt
catttggtcgtgaactgtttcaaatgtgtgactatacttgtgaggaatacgaaaagtcac
ataacggacaaacaactacaggtgttgcttgggtatgctgaagaagacatctatgattcc
tcacgtcaagccaccgccttcggtcttttaaaggctattgtatccaggaagctgattgtt
cctgagattgatgctgtcatgcagaaggttgccaagcttgctgtgacggggcagggtgag
ccagtgcgagtccagtgcagacagatttacctgaaatacattcttgactacccccttggt
gacaagctgaggcctaatctggagtacatattcgctcagcttaattatgattatgagact
ggaagagagtctgcgttggagatgattgcatacctctttgaaatgttccctcagggatta
ctacacatatactgtgggttattttttgttcctctttgcatgatgatgataaatgatgac
tctgcaaaatgcaagaaaatggcagccatagcaggaaagtctcttctcagcaagataaac
tcaacaaaacgagacctgatgttttcactagttaccacgtggtttaacagtgagaagagt
tcacacaagaggttagctgcccaggcctgtggcttgtttgtggaagccgagggggtggaa
tttcaaagacgacttggagttgttctcccactgatcgaaaaagaaattgaccctttgaaa
tttgacgatatatctgaagaggctgaagaaaaggctgcagatagactgctgttcagtttt
cttattttgataacaaagctaatcaaggaatgcaacattattgagttaaccaatcataat
gagattttgagcaatatctggtgccatgtccagtcccatttgcggtatcctcacagctgg
gtgtggctgactgctgctcagatttttggtttgttgttcgcttctcacaagccagaaaaa
cttgtcagcaaatggaaggagggaaaggcaggaaagaagagaagtgccatgtcagagcca
tcagcatccaccttcctcacagatgagctggacaaaaagatgaaggaactcgccttagcg
ttctgccaccagctgcagtccaaatttctggatcagtcccttggggaacaggttataaag
aatttgctgtttgtggccaaagttctctatcttctggcccctgactcagagaaggatgag
gagagcaaagatgaaatgcattgtgaaacaggagcacaggatgcttctgaggctgaaggt
gaggaagctccagctcaggaagagaaggacagtgaagaagcagaagagaaaagcaggcca
gccacactgttatgggtgatgaaaaagctctccctaatggcaaagcgagaagcagcgtac
tcccctaaaagccctttaaagagaacttgcatcttaaagttccttggagctgtagcaatg
gatctgggaaaagacaggatcaagtcatatcttccaacaatcatcacaccattgcacaga
gagctgagcagcacatatgctgagcaagatccaacgctgaagaatctttcacaggaaatt
atagaactgcttaagaaattagttggtctggagacattttcgcttgcctttgcttctgtg
cagaaacaggccaatcagaaaagggcaatcaggaaaaaacagagggctttgcagactgta
gcaaaccctgacattgctgccaggaagaagctgaagaaacacaaaaataaaatagaggca
aagaagagaaaaatagagttcttgaggcctggatacaaggctaagaaaccaaggagtcat
gcactgaaagacttggcaatggtagaatga
DBGET
integrated database retrieval system
