Gavialis gangeticus (Gharial): 109295979
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Entry
109295979 CDS
T07453
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1I-like
KO
K04856
voltage-dependent calcium channel T type alpha-1I
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn04010
MAPK signaling pathway
ggn04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
109295979
04020 Calcium signaling pathway
109295979
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ggn04040
]
109295979
Ion channels [BR:
ggn04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
109295979
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
GRP
Motif
Other DBs
NCBI-GeneID:
109295979
NCBI-ProteinID:
XP_019370704
LinkDB
All DBs
Position
Unknown
AA seq
1552 aa
AA seq
DB search
MLGNVLLLCFFVFFIFGIIGVQLWAGLLRNRCFMEENFTIQGDIVLPPYYQPEEDDEMPF
ICSLSGDNGIMGCHEIPPLKERGHECCLDKDDYYYYNSVRQEFNVSGMCVNWNQYYNVCR
TGNTNPHKGAINFDNIGYAWIVIFQVITLEGWVEIMYYVMDAHSFYNFIYFILLIIVGSF
FMINLCLVVIATQFSETKQREHQLMQEQRARYLSSSTVASYMEPGDCYEEIFQYICHIVR
KAKRRTLSLYNNLQNRRQGRMEPGNMKPDMNGKGQRCYRHCQKHNSLDYTPQALVQPIAV
TLTSDPNNCPRCHRVQREAARRLSILDSADSDQEDGGAGEEEGEGSRESNGVAELEKEEE
EGEEGKPMRLCSDMWQEVRVKLRGIVESKYFNRGIMIAILVNTISMGIEHHEQPEELTNI
LEISNVVFTSMFALEMILKLTAFGLFDYLRNPYNIFDSIIVIISIWEIIGQSDGGLSVLR
TFRLLRVLKLVRFMPALRRQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHIFGCKFSLK
TDTGDTVPDRKNFDSLLWAIVTVFQILTQEDWNVVLYNGMASTSPWASLYFVALMTFGNY
VLFNLLVAILVEGFQAEGDANRSYSDEEQSSSNVEELDRFQDVQDGSDPKLCAIPVTPNG
HLDPSLPSSNQPVVSAAVTNSSRHSLQPDQVLVAVGSRKSSVMSLGRVTYDQRSLSSSRS
SHYGAWGRSGAWGSRRSSWNSLARGHSLKHKPPSAEHESLLSGERHRTADGERAGMGRAP
HHRRTLSLDTKGSCDLVELASVPSSHRATRKVGVTSGTTEHQDCNGKMPDIAKEIFPKMN
NRKDRGEEEEEIDYTLCFRIRKMIEVYKPDWCELREDWSIYLFSPQNRFRILCQTIIAHK
LFDYVVLAFIFLNCITIALERPQIEHRSTERIFLTVSNYIFTAIFVAEMTLKVVSLGLYF
GDQAYLRSSWNILDGFLVFVSLIDIVVSVASAGGAKILGVLRVLRLLRTLRPLRVISRAP
GLKLVVETLISSLKPIGNIVLICCAFFIIFGILGVQLFKGKFYHCLGVDIRNITNRSDCV
AANYKWVHHKYNFDNLGQALMSLFVLASKDGWVNIMYNGLDAVAVDQQPVTNNNPWMLLY
FISFLLIVSFFVLNMFVGVVVENFHKCRQHQEAEEARRREEKRLRRLEKKRRKAQRLPYY
ASYCPVRLLIHSVCTSHYLDIFITFIICLNVVTMSLEHYNQPVSLETALKYCNYMFTTVF
VLEAVLKLVAFGLRRFFKDRWNQLDLAIVLLSVMGITLEEIEINAALPINPTIIRIMRVL
RIARVLKLLKMATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGKLVCNDEN
PCEGMSRHATFENFGMAFLTLFQVSTGDNWNGIMKDTLRDCTQDDRSCLSNLQFISPLYF
VSFVLTAQFVLINVVVAVLMKHLDDSNKEAQEDAEMDAEIELEMAHGLCPRSLGSPSSGQ
GGSGGGGGGGGGGRVDPEGRLCMRCYSPAQVGRSLCLPARLLQVAVGRSRAV
NT seq
4659 nt
NT seq
+upstream
nt +downstream
nt
atgctggggaatgttctgcttctctgcttctttgtcttcttcatctttggcatcattgga
gtgcaattgtgggctggtctgctccggaaccgctgtttcatggaggaaaacttcacaata
caaggcgacattgtcttacccccgtattaccaacccgaggaggatgatgagatgcccttc
atctgctcactgtcaggagacaatggcatcatggggtgtcatgagatcccaccactgaag
gagaggggccacgagtgctgtttggacaaagatgactactattactacaactctgtccgg
caggagttcaatgtcagtggcatgtgcgtcaactggaaccagtactacaatgtttgccgc
acaggcaataccaacccacacaaaggcgccatcaattttgacaatattggctatgcctgg
attgttatatttcaggtgatcacactggaagggtgggtggagattatgtattatgtgatg
gatgctcattcattctacaactttatctactttatcttgctgataatcgttggctccttt
ttcatgattaacctatgcctcgtggtcatagccacacagttctctgagaccaagcagcgg
gagcaccagctcatgcaggagcagcgagcacggtatctgtcctccagcactgtggccagc
tacatggagccaggtgactgctatgaggaaatcttccagtacatctgccacattgtgcgc
aaagccaaacgccgcaccctcagcctctacaacaacctgcagaaccgacgccagggccgg
atggagccaggcaacatgaagccagacatgaatgggaaaggacagagatgctacagacat
tgtcagaaacacaactctcttgactacactcctcaggcccttgtccagcccattgccgtg
acactgacttctgaccccaacaactgcccaagatgccacagagtacagcgtgaagcagcc
cggaggctctccatccttgacagtgctgactcagaccaggaggatggaggggccggtgaa
gaggagggagaaggaagcagggaaagcaatggtgttgctgagctggagaaagaggaagag
gagggggaagagggcaaaccgatgaggctgtgtagtgacatgtggcaggaagtgagagtc
aaactgagagggattgtggagagcaagtatttcaaccgtgggatcatgatagcgatcctg
gtgaacaccatcagcatgggcattgagcaccatgaacagccagaagagctgacaaacatt
ttggagatcagcaatgttgtgttcaccagcatgtttgccctggagatgattctgaaactc
accgcctttgggctcttcgattacctccgcaatccctacaacatctttgacagcatcatt
gtcatcatcagcatctgggaaatcattggtcagtcagatgggggcctatcggtgctaagg
acgttccgtcttttgcgtgtgttgaagctggtgcgtttcatgcctgccctacggcgccag
ctggtggtgctgatgaagaccatggacaatgtggccaccttctgcatgcttctcatgctt
ttcatcttcatattcagcatcctgggaatgcacatctttgggtgcaaattcagcctcaag
acagacactggagatacagtccctgaccggaagaattttgactccctgctctgggccata
gtcactgtgttccagatcctaacccaggaggactggaatgttgtgctctataatgggatg
gcatctacctcaccttgggcatccctttactttgtagccctcatgacctttggcaattat
gtccttttcaatcttctggtggctatcctggtggagggcttccaggctgagggtgatgcc
aaccgatcatactcagatgaagagcagagctcatccaatgtggaggagcttgacaggttc
caggatgtccaggatggctctgatcccaagctttgtgcaattcccgtgacaccaaatgga
catcttgacccctccctgccttcttccaaccagccagtggtatctgctgctgtcacaaat
tcatcccggcactctttgcagccagaccaagtcctcgttgctgttgggtccaggaagagc
agtgtgatgtcactggggagagtgacctatgaccagaggtcactgtctagctctcgaagt
tctcactatggtgcatggggtcgcagtggggcctggggaagccgccgctccagctggaat
agcctggctcggggacacagcctaaaacacaaacctccatcagctgagcatgaatctctg
ttatctggggaaaggcacaggacagcagatggggagcgagctgggatgggaagggcccct
caccaccggcgaacactttccctggacaccaaaggctcctgtgatctggtggagctggca
tcagtcccatccagtcacagagcaacccggaaggttggtgtaacatcgggaaccactgaa
catcaggactgcaatggcaaaatgcctgatattgctaaggagatcttcccaaagatgaac
aaccgcaaggaccgtggagaggaagaggaggagatagactacaccctgtgtttccgcatc
cggaagatgatagaggtctacaagccagactggtgtgagttacgggaggattggtctatc
tacctcttttctccccaaaacaggtttcgcatcctctgccaaacaatcattgctcacaag
ctctttgactacgttgttctggcctttatcttcctcaactgcatcaccatcgctctggag
agaccacagattgagcacaggagcacggagaggatcttcctcactgtgtccaactacatt
ttcacagcaatctttgtagctgagatgacactaaaggtggtctctctaggcctctatttt
ggggatcaggcctatctccgcagcagctggaacatcctggatggcttcttggtctttgta
tccctcattgacattgtggtctcagtggcctctgctggaggagccaaaattctgggggtg
ctccgggtcctccgactgctgcgtaccttacgccccctcagggtaatcagccgtgcccca
ggcctgaagctggtggtggagacgctcatctcctccctcaagcctattgggaacattgtc
ctcatttgctgtgccttcttcatcatctttggcatcctgggcgtgcagctcttcaaaggg
aagttctaccactgcctaggtgttgacatccgtaacatcaccaacaggtctgactgtgtg
gccgccaattacaaatgggtacaccacaagtacaacttcgacaacctggggcaggctctg
atgtctctctttgttcttgcctccaaagatggttgggtcaatattatgtataatggacta
gatgctgtggctgttgaccaacagccagtgaccaacaataacccctggatgctcctctac
ttcatctctttcctcctcattgtcagcttctttgtcctcaacatgtttgtgggggtagtg
gtggagaacttccacaagtgccggcagcaccaggaagccgaggaagcacgccggcgggaa
gagaagcggctgaggcgcctggagaagaagcgcaggaaagcgcagcgtttgccatactac
gcctcctactgccctgtccgcctcctcatccattcagtctgcaccagccactacttggac
atcttcatcaccttcatcatctgcctgaacgtcgtcaccatgtccctggagcactacaac
cagcctgtgtctctagagacagctttgaagtattgcaactacatgttcacaaccgtcttt
gtgctggaggcagttctgaagctggtggcatttgggctgcggcgattcttcaaagacagg
tggaaccagctggatctggctattgtgttgctttctgtcatgggcatcacactggaggag
attgagatcaatgcagctctccccatcaaccccactatcatccgcatcatgagggttctg
cgcatcgcccgggttctgaagcttctgaagatggccacagggatgcgagcattgctggac
acagttgtgcaagctctgccccaggtggggaaccttgggctgctcttcatgctcctcttt
ttcatctatgctgctctgggagtggagctctttggaaaactggtatgcaatgatgagaac
ccctgtgaaggcatgagtcgccatgccacctttgagaactttgggatggccttcctcacg
ctcttccaggtctccactggtgacaactggaatggaataatgaaggacacgctgcgggac
tgcacccaggatgaccggagctgcctcagcaacctgcagttcatctcaccgctctacttc
gttagctttgtgctcactgcccagtttgttctcattaatgtggtggtcgctgtgcttatg
aaacacctggatgacagcaacaaagaggcacaggaggacgctgagatggatgctgagatt
gagctagagatggcacatgggttgtgcccccgcagcttgggctcaccgagttcaggacag
ggaggaagtggaggaggtggtggaggaggaggtggtgggagagtggaccctgaaggacgt
ctttgcatgagatgttactctccagcacaggtgggtagatctttgtgcttaccagcaaga
ctgctgcaggttgcagtggggagaagcagagcagtgtaa
DBGET
integrated database retrieval system
