Gavialis gangeticus (Gharial): 109296128
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Entry
109296128 CDS
T07453
Symbol
PARPBP
Name
(RefSeq) PCNA-interacting partner isoform X1
KO
K27412
PCNA-interacting partner
Organism
ggn
Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ggn03400
]
109296128 (PARPBP)
DNA repair and recombination proteins [BR:
ggn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
109296128 (PARPBP)
TLS (translesion DNA synthesis) factors
Other TLS factors
109296128 (PARPBP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD_C
Motif
Other DBs
NCBI-GeneID:
109296128
NCBI-ProteinID:
XP_019370908
LinkDB
All DBs
Position
Unknown
AA seq
586 aa
AA seq
DB search
MAAFQQKILNMVKDFRRQWHLFSDSERTTVCGADCMLMALQLSMAEVNKQHCGDFTVLLS
DVLETWNYFLRDKLGLSCEDMEAPVHYADIRKAYDTFLKSSNLLDLIEICQKCHMLIPES
EEISSVQLLEFISGIPDLAEENSTVLCTPSSPVTRQSQDSMKVLLVVKKFFCAYLNLLVN
SKNDLALAHVLNVPERGLGREAFTDLKHTAQERQMSIFLVATSFIRTIELGGKGYAPSLF
DPLRTHVKGLSDFVNFIDKLEEIVGEVVDPRIAGGRILSTVKMHLIKSRNSRDPFCQAAE
EVVHDLDLRIKNIINSQHEATTASTTGISPARPKLHAINHGTAYCGRDTVKALLVLLDEE
AVNPPTKNKAELLYDDENLTSFGITSVLTLFRSPSQPRGSSPKPLRQRIKKLEEESKIKM
KQPLIRSQFACTYKDDLTKKKSLQFFSSSESPACVHPTQKQDPALPLKDAPLAAEGMNSD
FERQAFGTKSENIHQNGSKSKKEDAKLSCQLRNKSTKRKQVELNKEVICNNDNEPSQDTN
IKRPKTSNNPQKKLDSKLDRAGKSNKTTAKTKLIAGQAKLTHFFRL
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctttcagcaaaagatcttaaatatggtcaaagattttagaagacaatggcat
ctattttcagattcagaaagaacaactgtgtgtggagcagactgtatgcttatggcttta
cagctctcaatggctgaggtcaataaacagcactgtggagacttcacagtattgctaagt
gatgtgttggaaacgtggaattactttctacgtgacaaattgggattatcatgtgaagac
atggaagcacctgtacattatgcagacattagaaaagcttatgatacattcttaaagagc
agcaatctgttggatctaatagagatatgtcagaagtgtcatatgctaatacctgaaagt
gaagagatatcctcagttcagttgctggaattcatatctggaataccagacttggcagaa
gaaaatagtactgttctttgtacgccctcttcaccagtcaccagacagagccaggatagt
atgaaggtgctactggtggtgaagaagtttttttgtgcgtatttaaacctgttggtgaat
tctaagaatgatctggcgttggctcatgttctaaatgttcctgaaagagggctgggaaga
gaagctttcactgacctgaagcacactgcgcaagaaagacaaatgtccatttttctggtg
gcaacatctttcatccgaaccatagaacttggaggcaaaggttatgcaccttcactgttt
gatcctttaaggacccatgtaaagggactttcagactttgttaattttattgacaaactg
gaagaaattgttggtgaagtcgtggatccaagaattgcaggggggcgaattctatcaaca
gtcaagatgcatttgataaaaagccgaaacagcagggatcctttctgtcaagcagctgag
gaagttgtacatgatttggatttaaggattaaaaatattatcaattctcaacatgaagcc
acgactgctagcaccactggaatcagtccagcccggccaaaattacatgccataaatcat
ggcacggcatactgtggcagagatactgtgaaggccttactagtgcttttggatgaagaa
gctgtcaatcctcctactaaaaacaaagcagaattattatatgatgatgaaaatttaact
tcatttggaatcacctctgttttgacactgttcaggtctccatctcagcctaggggatct
tctccaaaaccgctcaggcaacgtattaaaaaacttgaggaagaaagtaaaattaagatg
aaacaacccttaatcaggtctcagtttgcatgtacatataaagatgacttgactaagaag
aagagtctgcagtttttcagtagcagtgaaagcccagcttgcgtacacccaacacaaaaa
caagaccccgctctccctctaaaagatgcacctcttgcagctgaaggtatgaattcagat
tttgaaagacaagcatttggaactaaatctgaaaatattcaccagaatggaagtaaaagt
aaaaaagaagatgcaaagctgagctgtcagctaagaaacaagagcacaaagaggaaacag
gtggagctgaataaagaagtcatctgtaataatgacaatgaaccatctcaggatacaaat
attaagagacctaagacttcaaacaaccctcagaagaaattggacagcaaattggataga
gcaggaaaaagcaacaaaactactgccaagactaaattgattgctggtcaggcaaaatta
acacatttttttagattatga
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