Gavialis gangeticus (Gharial): 109296148
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Entry
109296148 CDS
T07453
Symbol
TRIM24
Name
(RefSeq) transcription intermediary factor 1-alpha
KO
K08881
tripartite motif-containing protein 24 [EC:
2.3.2.27
]
Organism
ggn
Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ggn01001
]
109296148 (TRIM24)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ggn04121
]
109296148 (TRIM24)
Enzymes [BR:
ggn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109296148 (TRIM24)
Protein kinases [BR:
ggn01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
109296148 (TRIM24)
Ubiquitin system [BR:
ggn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
109296148 (TRIM24)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
PHD-1st_NSD
HAT1_C_fung
Motif
Other DBs
NCBI-GeneID:
109296148
NCBI-ProteinID:
XP_019370942
LinkDB
All DBs
Position
Unknown
AA seq
940 aa
AA seq
DB search
MREFIVLTYVSLYFFSPVGVIRCPICGQECAERHIIDNFFVKDTTEVPSSTVEKSNQVCT
SCEDNAEANGFCVECVEWLCKTCIRAHQRVKFTKDHTVRQKEEVSPEAVGVTSQRPVFCP
SHKKEQLKLYCETCDKLTCRDCQLLEHKEHRYQFIEEAFQNQKVIIETLITKLMEKTKYI
KFTGKQIQNRILEVNQNQKQVEQDIKVAIFTLMVEINKKGKALLHQLESLAKEHRMKLLQ
QQQEVAGLSKQLEHVMNFSKWAVSSGSSTALLYSKRLITYRLRYLLRARCDASPVTNNTI
QFHCDPSFWAQNIFNLGSLVIEDKETPPHVPKSPVMEPNLQPQSGLPTNQLSKFPTQINL
AQLRLQHMQQQVMAQRQQAQRRAGPVGLPNPRVPGPVQQAPTHQHPPPRLINFQNHSPKS
NGSVLPAQPQMRFPQAQSIPKQTIKPNPLQMAFLAQQAIKQWQISSGQTSAAPSTASSTT
STPSSPTVTSAAGYDGKTYGPPLIDLSSPLGSSYNLPSLPDIDCSGNITLDNIVRKDGVV
EHTQPKPPSNRTVQSPNSSVPSPGLSGAVSMTNIHPPIRSPSASSVGSRGSSGSSSRPPG
ADSTHRVPVVMLEPIRIKQESSAPSENYDFPIVIVKQETDEESRPRNANFSRSILTSLLL
DNNRNSSSDETVLRTDAPDSTGDRPGILQENTSNGKTTWIGASHIGDSRKEDDPNEDWCA
VCQNGGELLCCEKCPKVFHLTCHVPTLMNFPSGEWICTFCRDLSKPEVEYDCDNPSNNAE
KRKLEGYTGLAPIDRRKCERLLLYLYCHEMSLAFQDPVPPTVPDYYKIIKKPMDLSTIKN
RLQVNHSFYSKPEDVVADFRLIFQNCAEFNEPDSEVADAGMKLEVYFEELLKSLYAEKKF
PVQPHSRVESENSELADDSDNDFVQPRKKRLKVEDRQFLK
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgagagagtttatagttctaacatatgtctcactttactttttttctccagttggtgtt
atccgctgtccaatttgtggtcaggaatgtgcagagagacacatcatagataattttttt
gtaaaggataccacagaggttcctagtagcacagtggaaaagtcaaatcaggtctgtaca
agctgtgaagacaatgcagaagcaaatggtttttgtgtggaatgtgtagaatggttgtgt
aagacttgtatcagagctcatcaaagagttaaattcacaaaggatcacacagtcagacag
aaagaggaagtatctccagaggcagttggtgtaaccagtcagcgacctgtgttttgtcct
tcccacaaaaaggaacagttaaaactctattgtgaaacttgtgacaagttgacatgccgg
gactgccagttactggaacacaaagagcacagataccagtttatagaagaagcttttcag
aaccagaaagtgatcattgagacgcttatcaccaaactaatggagaagactaaatacata
aagtttacagggaagcagatccaaaacagaatccttgaagtgaaccagaaccaaaagcaa
gttgaacaggacattaaagtcgctatatttacactgatggtggaaataaacaaaaagggt
aaagctctgttgcatcagttagagagtctggcaaaagaacatcggatgaaacttctgcag
caacagcaggaagtggcaggtctttctaaacaactggaacatgtcatgaatttttccaaa
tgggcagtttccagtgggagcagcacagcattgctatacagcaaacgtctgattacatat
cggctacggtatctccttcgagcacgatgtgatgcctcaccagtgactaacaacaccatc
cagtttcattgtgatcctagcttctgggctcaaaatattttcaatctaggttctttggta
attgaagataaagaaactccaccacacgtgcccaagagccctgtgatggaaccaaattta
cagccacaaagtggtttacctacaaaccagctatctaagtttccaacacagatcaattta
gctcagctacgactccagcacatgcagcaacaggtcatggctcaaaggcaacaggctcag
cgaagggcaggtccagtgggtctaccaaatccgagagttccaggaccagtgcagcaagct
cctactcatcagcatccacctccacgcttgattaactttcagaatcacagccccaagtct
aatgggtcagttcttcctgcacaaccacagatgaggtttccccaggcccagagcatacca
aaacaaaccataaaacccaacccattacagatggcattcttggcacagcaagctatcaaa
cagtggcagatcagcagtggacaaacttcagctgccccatcaactgcaagcagcacaaca
tccaccccatccagtcccacagttactagtgctgcaggatatgatggaaagacatatggt
ccacctctgatagatttgagttctccactgggtagctcctataacctaccttctcttcct
gatattgattgttcgggaaacattacactggacaatattgtgaggaaagatggcgttgta
gagcatacccagccaaaacccccttcaaacagaaccgtccagtctccaaattcatcagtg
ccatctccaggcctctctggagcagtaagcatgactaatatccatcctccaattcgctca
cccagtgcttctagtgtcggaagtagaggcagctctggctcatccagcagaccacctgga
gctgattctacccacagagtccctgttgtcatgttggagccaatcaggattaaacaggaa
tctagtgcaccgagtgagaactatgatttcccaattgtcatagtaaaacaagaaacagat
gaagaatcccgtcctcgaaatgccaacttttcaagaagcatacttacctcattgttgttg
gataacaatcgtaattcctcttctgatgaaactgttttaagaacagatgctccagatagc
acaggtgaccgaccagggatacttcaggagaacacatccaatggaaagacaacatggata
ggtgcctctcacattggggatagcagaaaagaggatgaccccaatgaggactggtgtgca
gtgtgtcaaaatggaggggagctcctttgttgtgagaaatgtccaaaagtattccacctt
acttgtcatgtccctacactgatgaactttccaagtggagaatggatttgcacgttctgt
cgggacttgtccaagccagaagtagaatatgattgtgataaccccagtaacaatgctgaa
aaaagaaaattggaaggatatacaggattggcaccaatagaccggaggaagtgtgaaagg
ttactgctgtacctctactgccatgaaatgagccttgcttttcaagatccagttcctccc
acggtacctgattactacaaaataatcaagaagccaatggacttgtcaactatcaaaaac
agattacaagtaaaccattcattctactcaaagccagaggatgttgtggctgatttcaga
ctgattttccaaaattgtgctgaatttaatgagcctgattcagaagtagcagatgctggc
atgaaacttgaagtatactttgaagagcttctgaaaagcctttatgctgagaagaaattc
cctgtacaacctcactcccgggttgagagtgaaaattcagaacttgctgatgactcggac
aatgattttgtacagccccggaaaaaacgtctcaaagtagaagaccgccagttccttaaa
tga
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