Gavialis gangeticus (Gharial): 109296346
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Entry
109296346 CDS
T07453
Symbol
VPS45
Name
(RefSeq) vacuolar protein sorting-associated protein 45
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109296346 (VPS45)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ggn04131
]
109296346 (VPS45)
Membrane trafficking [BR:
ggn04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
109296346 (VPS45)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec1
B12-binding
Motif
Other DBs
NCBI-GeneID:
109296346
NCBI-ProteinID:
XP_019371332
LinkDB
All DBs
Position
Unknown
AA seq
570 aa
AA seq
DB search
MNVVFAVKQYVSKMIEDSGPGMKVLLMDKETTSIVSMVYTQSEILQKEVYLFERIDSSNR
ETMKHLKAICFLRPTKENVEYLIQELRRPKYSIYFVYFSNVISKSDIKSLAEADEQEVVA
EVQEFYGDYIAVNPHVFSLNLLGCCQGRNWDAAQLSRTTQGLTALLLSLKKCPMIRYQLS
SESAKRLAECVKQVITKEYELFDFRRTEVPPLLLILDRSDDAITPLLNQWTYQAMVHELL
GINNNRIDLSRVPGISKDLREVVLSAENDEFYANNMYLNFAEIGSNIKNLMEDFQKKKPK
EQQKLESIADMKAFVENYPQFKKMSGTVSKHVTVVGELSRLVSERNLLEVSEVEQELACQ
NDHSSALQNMRRLLQNPKVTEFDAARLVMLYALHYERHSSNSLPGLMMDLKNKGVSEKYR
KLVSAVVEYGGKRVRGSDLFSPKDAVSITKQFLKGLKGVENVYTQHQPLLHETLDQLIKG
KLKDNQYPYLGPSTLRDRPQDIIVFVIGGATYEEALTVYNLNRTNPGVRIVLGGTTVHNT
KSFLEEVLASGFRGRSGESSHVTPRSSSRR
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtggtgtttgcagtgaagcagtatgtgtccaagatgatcgaggacagcgggccg
gggatgaaggtcctcttgatggataaagaaacgaccagtattgtaagcatggtatacacc
cagtcggagatcctgcagaaagaagtttacctctttgagcgcattgattcttcaaacaga
gagaccatgaaacacttgaaagcaatctgtttcttgcgacccacaaaggagaatgtggaa
tatctcattcaagagctgcggagaccaaaatacagcatctattttgtttatttcagtaac
gtgattagtaagagcgatatcaagtcactggctgaggctgatgaacaggaagttgtggca
gaagttcaggagttctatggagattatattgcagtgaatccacatgtcttttccctcaac
ctcttaggctgctgtcagggtcgcaactgggatgcagcccaactatccagaaccactcaa
gggctaacagctttgcttttgtctttgaagaaatgccccatgatacgttaccagctttcc
tctgaatcggcaaagaggcttgctgaatgtgttaagcaagtaattactaaagaatatgag
ctgtttgatttccggcgcacagaagttcctccattactcctgattctggaccggtcggat
gatgctatcaccccacttctgaaccagtggacctaccaagccatggttcatgagctgctg
gggatcaacaacaaccgtatcgatctgtctcgagtacctggaataagcaaggatctgagg
gaggtggttctgtctgcggagaacgatgagttttatgccaacaacatgtatctgaacttt
gctgagattggcagcaatatcaagaatctcatggaggatttccagaagaagaaacccaag
gagcagcagaagcttgagtccatagcagacatgaaggcctttgtggagaactacccgcag
ttcaagaagatgtcaggcacagtatcgaagcatgtgacagtggtgggtgagctttccagg
ctggtcagcgagcggaacctgctggaggtgtcagaggttgagcaggagctagcttgtcag
aatgaccactcaagcgcactccagaacatgcggcggctcctgcagaatccgaaggtgacg
gagtttgatgctgcccgcctggtgatgctttatgctctgcactatgagcgccacagcagc
aacagcctgcctgggctgatgatggacctcaagaacaaaggagtttcggagaagtatcgg
aagctggtgtctgcagttgtggaatatggtgggaagcgtgtccgaggcagcgatcttttc
agccccaaggatgctgtgtccatcactaaacaattcctcaaaggactgaagggagttgag
aatgtgtacactcagcatcagcccctccttcatgagacgctggatcaactcatcaaagga
aaactcaaggacaaccagtacccctacctgggccctagcacactccgtgacaggcctcaa
gatattattgtgtttgtaattggaggagcaacctatgaagaagccctaactgtctacaac
ctcaaccgcaccaatccaggtgtccgcattgtgctgggtgggaccacagtccacaacaca
aaaagcttcctcgaggaagttttggcttctgggttccgtggccggagtggcgagagctct
catgttacgccgaggtcaagcagcagacggtga
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