Gavialis gangeticus (Gharial): 109296348
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Entry
109296348 CDS
T07453
Symbol
SAMM50
Name
(RefSeq) sorting and assembly machinery component 50 homolog
KO
K07277
outer membrane protein insertion porin family
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
109296348 (SAMM50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
ggn03029
]
109296348 (SAMM50)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ggn02000
]
109296348 (SAMM50)
Mitochondrial biogenesis [BR:
ggn03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
109296348 (SAMM50)
Transporters [BR:
ggn02000
]
Other transporters
Pores ion channels [TC:
1
]
109296348 (SAMM50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Omp85
POTRA
FLQE3_permease
Motif
Other DBs
NCBI-GeneID:
109296348
NCBI-ProteinID:
XP_019371295
LinkDB
All DBs
Position
Unknown
AA seq
469 aa
AA seq
DB search
MGTVQARSLDPLPMSGPDLGALGEEAELIEVEPETKQEILENKDVVVQHVHFDGLGRTKD
DIIMYEIGDVFRAKNLIDVMRKSHEAREKLLRLGIFRQVEVLIDTCQGDDALPNGLDVTF
EVTELRRLTGSYNTMVGNNEGSMVLGLKFPNLLGRAEKVTFQFSYGTKETSYGLSFFKPQ
PGNFERNFSVNLYKVTGQFPWSSLRETDRGVSTEFNFPVWKTNHTLKWEGVWRELGCLAR
TASFPVREESGHSLKSSLSHAMVIDSRNSSILPKRGALLKINQELAGYSGGDVSFLKEDF
ELQLNKQVFWDSVFSASLWGGLLVPIGDKPSSIADRFYLGGPTSVRGFSMYSIGPQSEGD
YLGGEAFWASGLHLYTPLPFRPGRGGFGDLFRTHFFLNAGNLCNLNYGEGPKAHLRKLAE
CIRWSYGAGIVLRLGNIARLELNYCFPMGVQSGDRICDGVQFGAGIRFL
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgggcacggtgcaggcgcggagtttggaccctcttccaatgagtggacctgatttaggt
gctttaggagaagaagctgaactaattgaagttgaacctgaaaccaaacaggaaattctt
gaaaacaaggatgtggtggttcaacatgtacactttgatggacttggaagaaccaaagac
gatattatcatgtatgaaatcggtgatgttttcagggctaaaaacttgattgatgtaatg
agaaaatcacatgaagctcgtgaaaagttgcttcgactgggaatttttagacaagtggaa
gttctgattgatacttgtcaaggagatgatgcccttccaaatggtttagatgtaacattt
gaagtaacagaattgagaagactaactggaagctataacactatggtcggcaataatgaa
ggcagcatggtccttgggctcaaattccctaatctccttggacgtgcagagaaagtgacc
ttccagttctcctatggaactaaggaaacttcatatggcttatcattcttcaaaccacag
cctggcaactttgaaagaaatttttcagtaaacctgtataaagtaaccgggcagttccct
tggagctctcttcgtgaaactgacagaggagtatcaacagaatttaattttccagtatgg
aagacgaatcacacgctgaagtgggaaggtgtttggagagagcttggatgtctcgcaaga
acagcatcttttcctgttcgagaagaaagtggacactctcttaaatcttctctctctcat
gccatggtaatcgattctcggaactcttcaatcttgccgaaacgaggtgctctgctgaaa
attaatcaggagctggctggctacagtggtggtgatgtgagctttctgaaagaggacttt
gagcttcagttgaataagcaggttttttgggattcggtattttcggcatctctgtggggt
ggattgttggttcctattggagacaagccatccagtattgctgataggttttatcttggt
ggaccaacaagtgttcgtggattcagtatgtacagcattggaccccaaagcgaaggtgat
tacctgggaggagaagccttttgggccagtggcctgcacctgtacacgcctctccctttt
cggccaggccgggggggatttggagaccttttcagaacacacttcttcctcaatgctgga
aacctctgcaaccttaactatggtgaaggccccaaagctcacctcaggaagctggctgag
tgtatccgatggtcgtacggtgctggaatagtgctcagacttggaaacattgctagattg
gagcttaactactgtttccccatgggagtgcaaagtggcgacaggatatgtgatggtgtc
cagtttggagctggaataaggttcctataa
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