Gavialis gangeticus (Gharial): 109296362
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Entry
109296362 CDS
T07453
Symbol
ARID2
Name
(RefSeq) AT-rich interactive domain-containing protein 2
KO
K11765
AT-rich interactive domain-containing protein 2
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109296362 (ARID2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ggn03000
]
109296362 (ARID2)
03021 Transcription machinery [BR:
ggn03021
]
109296362 (ARID2)
03036 Chromosome and associated proteins [BR:
ggn03036
]
109296362 (ARID2)
Transcription factors [BR:
ggn03000
]
Eukaryotic type
Helix-turn-helix
ARID
109296362 (ARID2)
Transcription machinery [BR:
ggn03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
109296362 (ARID2)
Chromosome and associated proteins [BR:
ggn03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
109296362 (ARID2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFX_DNA_binding
ARID
TSTD2_N
Motif
Other DBs
NCBI-GeneID:
109296362
NCBI-ProteinID:
XP_019371319
LinkDB
All DBs
Position
Unknown
AA seq
1802 aa
AA seq
DB search
MAVSEKNQWGEIAEGFNFPRSCSNAAFALKQYYLRYLEKYEKVHHFGEDDDEVQPGNPKP
QLPIGAIPSSYNYQQHSVSDYLRQSYGLSMDFNSPNDYNKLVLSLLSGLPNEVDFAINVC
TLLSNESKHVMQLEKDPKIITLLLANAGVFDDIGCCSTRLNYSSHVPRPKYCLTLGQSQG
LPALGSFSAVFGEEWKEKTDRDFVKFWKDIVEDNEVRDLISDRNKSQDIPSEEWIWESLF
HPPRKLGINDIEGQRVLQIAVILRNLSFEEGNVKLLAANRTCLRFLLLSAHSHFISLRQL
GLDTLGNIAAELLLDPVDFKTTHLMFHTVTKCLMSRDRFLKMRGMEILGNLCKAEDNGVL
ICEYVDQESYKEIICHLTLPDVLLVISALEVLYMLTEMGEVACTKIAKVEKSIDTLVCLI
SMDIQMFGPDALAAVKLVEHQSSNHQVVPEIRTQVVEHASSQAHGTAVSASRAAQHVAPP
PGIVEIDSEKFACQWLNAHFEVNSDCSVSRAEMYSEYLSTCSKLARGGILTSTGFYKCLR
TVFPNHTVKRVEDPNNNGQAHIHVVGVKRRAIPLPIQMYYQQQPTSTPVVRIDSVPDVSQ
SPSPAGIPHGPQSVGNHFQRTTVNNQCSNLTATQMSFPIQGVHTIAQTISRIPQNPSVHT
QQQQNSPLTVIQNKAPISCEVVKATVIQSSVPQSAVPVTIAVGGAASNQNHSSAGPQPSV
TVVSSQTLLHHQPVIQQQSPLHAVVPGQIPSGTPVTVIQQAVPQGHIFGRVQNIPACTSA
VSQGQQLITTSSPVQTSSQQSSAGNQQQDTVIIAPQQYVTTSASNIVSATTVQNFQVAAG
QMVTIAGVQNPQTSRVGFQNIAPKPLPSQQVPPTVVQQPMQQQQQQQPSQQSVVIVSQPA
QQGQTYAPAIHQIVLTNPTSIPPGQTVQLTGQPNLTPSSSPSPGPVTNNQVPAVMSSTST
TQSQGPPPTVSQMLSVKRQQQQQHSPAPSQQQVQVQQQQPIQMQVQPQQANAGVSQPNSG
ESSLIKQLLLPKRGPSTPGGKLILPAPQIPPPNNARAPSPQVVYQVANNQASSFGVQGQS
PAQQLLVGQQNVQLVPSAIQPQGAVQTVPISNLQILPGQLISNSPATIFQGTSGNQVTIT
VVPNTSFAPATVSQGNATQIIAPAGIAVSGTQAGVGLQVQTLPTTQAPPAGQSPCAAAAP
PFKGDKIICQKEEEAKEATGLHIHERKIEVMENPSCRRGAVNASNGDANENEMQVGSLLN
GRKYNDSSLPPSNSGKAQNEANQCLQVSNGPSLELGENGSPGKQNFEQMDTQEIKSDLKK
PLVNGICDFDKGDGSHLSKNIPNHKTSNHVGNGEISPVEQQGNLDATQQDTAKGDQGERI
SNGPVLTLNSSPVVSGTQESAKLLPQQLSGTNTDLPNGPLASSVNSDVPQQRPSVVVSPQ
STASVIQGHQIITVPHSGSRGSQSTLSSEVRSTNGTAECKTVKRPAEDNDRETVPGIPNK
VGVRIVTISDPNNAGCSATMVAVPAGADPSTVAKVAIESAVQQKQQHPATYVQSMVTQGT
PVTSVPTVQVQGQQINLQPPSYTAASQHGEQAKKPGQNFMCLWQSCKKWFQTPSQVFYHA
ATEHGGKDVYPGQCLWEGCEPFQRQRFSFITHLQDKHCSRDALLAGLKQDEHGQAGNQKP
PNKPPNAGGTASAPRAQKAIVNHPSAALMALRRGSRNLVFRDFTDEKEGPITKHIRLTAA
LILKNIGKYSECGRRLLKRHENHLSVLAISNMEASSTLAKCLYELNFTVPSKEQDKVSEM
LQ
NT seq
5409 nt
NT seq
+upstream
nt +downstream
nt
atggcagtctctgagaagaatcagtggggagaaattgcagaggggttcaactttcccaga
agttgctctaacgctgccttcgctttaaaacagtattacttgcggtatttggaaaagtat
gagaaagtacatcattttggggaggatgatgatgaggtacaaccaggcaatccaaagcca
caacttcctattggtgcaattccatcttcctacaattaccagcaacacagtgtgtcagat
taccttcgtcaaagttacgggctgtctatggactttaattcgccaaatgactataataaa
ttggtgctttcactgttatctggactcccaaatgaagtggactttgctattaatgtgtgt
actcttctgtcaaatgaaagcaaacatgtcatgcagcttgaaaaagaccctaagatcatc
actttgctgcttgctaatgctggggtgtttgacgacataggatgttgttctacaagatta
aactattcctcacacgtacccagaccaaaatattgtctgactctgggccagtcgcaagga
ctcccagctttaggatcattttctgctgtatttggagaagaatggaaagagaaaactgat
agagattttgttaagttttggaaggatattgttgaggataacgaagtacgtgacctcatt
tctgaccgaaacaaatctcaagatattccatcagaagaatggatatgggaatccttattt
cacccacctcgcaagttgggcattaatgatatagaagggcagcgggtacttcagattgca
gtgattttgagaaatctttcctttgaggagggaaatgttaaacttttggcagctaatcgc
acttgtcttcggtttctgctgctctctgctcatagtcattttatatctctgagacagctg
ggacttgacacactaggaaatattgcagcagagcttctgttggatccagttgatttcaaa
actacccatcttatgtttcacactgttacaaaatgcctgatgtcaagggataggttttta
aaaatgagaggcatggaaatcttggggaatctttgtaaagctgaagataatggtgtttta
atttgtgaatatgtggatcaagaatcctacaaagaaataatatgtcatctcactttacca
gatgttctgcttgtaatctcagcacttgaggtgctttatatgctcacagaaatgggagaa
gtggcctgcacaaagattgctaaagtagaaaagagcatagatacattagtgtgtctgatt
tctatggacatccagatgtttggacctgatgcccttgctgctgtaaaacttgttgaacat
caaagctccaaccaccaagtagtgcctgaaatcaggacgcaggtagtggagcatgcttcc
tcccaggcccatggcacagctgtgtcagcatcaagagcagcacagcatgttgctccacca
ccaggaatagtagaaatagacagtgagaaatttgcatgtcagtggttgaatgcacatttt
gaggtgaattcagattgctcagtctctcgagcagaaatgtactctgaatatctctcaacc
tgcagtaaattagctcgaggtggaattctgacatcaactggattttataaatgtcttcga
actgtctttccaaatcacacagtgaagagagtagaggatccgaacaacaatggacaggca
catatacacgtggtaggagtaaaaaggagagctataccacttcccattcagatgtactat
cagcagcaaccaacttctacccctgtcgtccgaattgattctgttcctgatgtatctcag
tctccttcaccagcaggaatcccgcatggaccacaaagtgtaggaaaccattttcagagg
acaacagttaataaccagtgttcaaatttaacagcaacacaaatgtcttttccaattcaa
ggtgttcacactatagcacagactatttcaagaattccacaaaatccttcagttcacaca
cagcagcaacaaaattctccactgactgtcatacaaaataaagctccaatttcctgtgaa
gtagtcaaggccacggtaatacagagctctgttccccagtctgcggttcctgttactatt
gctgtaggaggagcagcatctaatcaaaatcacagcagtgcaggaccacagccatctgtt
actgttgtcagttctcagacattgcttcaccaccaacctgtaattcaacaacagtctcca
ctacacgcagtggtaccaggacagataccatcaggcactcctgttacagtaattcaacaa
gctgtacctcagggtcacatatttggcagagtacagaacataccagcatgcacttcagca
gtttcacagggtcagcagttaatcacgacatcgtcacctgtgcagacttcatctcagcaa
tcttctgctggtaaccagcaacaggacacagtcatcatagcaccccaacagtatgtcacg
acatctgcgtccaatattgtttctgccactacagtacagaatttccaagttgcagccggg
cagatggttactattgctggtgtccaaaatccacaaacgtctagggtaggattccagaat
attgcgccaaagcctctaccttctcagcaggtccctcctactgtggtacaacagccgatg
cagcaacagcagcagcagcaaccatcgcaacaaagtgtagtgattgtaagccagccagct
caacaaggtcaaacatatgcaccagccattcaccaaattgtgcttactaatccaacttct
attccacctggtcaaactgtccagttgactgggcagccaaatttaactccgtcttcctca
ccatcccctggaccagttacaaataaccaagtccctgctgtaatgtcatctacatctacc
actcagtcacaaggaccccctcctactgttagccagatgctgtctgtaaagagacaacaa
cagcagcaacattcaccagcaccatcacagcaacaggtacaagtccagcaacagcaaccg
atacaaatgcaggttcagccacagcaagctaacgcaggagtcagccagcctaactccggt
gaatctagtctgataaaacaactgcttcttccaaaaagaggcccttcaactccaggtggt
aaacttatactcccagctccacagatccctccacctaacaatgcaagagctcctagccct
caggtggtttatcaggtggccaataaccaagcatccagttttggagttcaaggacagtct
cctgctcagcagctactagttggacagcaaaatgttcagctggttccgagtgcaatccag
ccccaaggggcagtacaaacagtacccatttctaatttgcaaatattgcctggccagttg
atctcaaatagcccagcaactattttccaagggacttctggcaaccaagttactataact
gttgtgccaaatactagttttgctcccgcaactgtgagtcagggaaatgcaactcagatc
attgctccagcaggaattgcagtgagtggaacgcaggcaggagttgggctacaggtgcaa
acacttccgactactcaagcacctccagctggacaatcaccatgtgctgctgctgctccc
ccattcaaaggtgataaaataatttgccaaaaggaggaagaagcaaaggaagcaacaggt
ttacacattcatgaacgtaaaattgaagtaatggagaatccctcctgtcgaagaggagct
gtgaatgccagcaatggagatgcaaatgaaaatgaaatgcaggtgggaagtcttttaaat
gggagaaagtataatgactccagtctacctccttctaactcagggaaagctcaaaatgag
gccaatcagtgcttacaagtcagtaatgggccatcattagaattgggtgagaatggatct
cctggaaagcagaactttgagcaaatggacacacaggaaattaaaagtgatttgaagaag
cccttggttaatggaatctgtgattttgataaaggtgatggttctcatttgagcaaaaac
attccaaatcacaaaacttccaatcatgtaggaaatggtgagatatctccagtggaacaa
caagggaatttggatgccacacagcaagatactgccaaaggtgatcaaggggaaagaatt
tctaatgggcctgtattaactttgaatagttcacctgttgtaagcggtacacaggagtct
gcaaaactgttaccccaacaacttagtggtaccaatactgatttacctaatggacctcta
gcttcaagtgtgaattcagatgtgcctcagcaacgcccaagtgtagttgtctctccacaa
tctacagcctctgttatacaggggcatcaaatcataacagttccacactcgggatccaga
gggtcccaatctaccctgtcatctgaagttcggtctactaatggcacagcagaatgcaaa
actgtaaagaggccagcagaggataatgatagggaaactgttccaggaattccaaataaa
gtaggagttagaattgttacaatcagtgaccccaacaatgctggttgcagtgctactatg
gttgctgtgccagctggagcggatccaagcactgtagctaaagtagcaatagaaagtgct
gttcagcaaaagcagcagcatccagcaacatatgtacaaagtatggtcacacagggcaca
cctgtgacatcggtaccaacagtgcaagtacagggacagcagatcaatttgcagccaccc
tcatacactgcagcaagtcagcacggagagcaagcaaaaaaaccgggacagaacttcatg
tgtctgtggcagtcatgtaaaaagtggtttcaaacaccatcgcaggttttctatcatgca
gccactgaacatggtggaaaagatgtctatccagggcagtgcttatgggagggctgtgaa
cctttccagcggcaaagattttccttcattacccacttacaggataagcactgctccaga
gatgctctgcttgcaggattgaaacaagatgaacatggacaagcaggaaatcagaaacct
cctaataagccaccaaatgcagggggtactgcctctgctcccagagcacagaaggccatt
gtgaatcatcctagtgctgccctcatggcattaaggaggggatcaagaaaccttgtcttc
agagatttcacagatgaaaaagagggaccaataactaaacacatccgattaacagctgcc
ttaatattaaaaaatattggtaaatattcagaatgtggtcgcagattgctaaagagacat
gaaaatcatctatcagtgctagccattagtaacatggaagcttcctccacacttgccaaa
tgcctttatgaacttaattttactgtcccaagtaaagaacaagataaagtctccgaaatg
ctgcagtga
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integrated database retrieval system
