Gavialis gangeticus (Gharial): 109296368
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Entry
109296368 CDS
T07453
Symbol
CPSF6
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 6
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn03015
mRNA surveillance pathway
ggn03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109296368 (CPSF6)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
109296368 (CPSF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ggn03019
]
109296368 (CPSF6)
Messenger RNA biogenesis [BR:
ggn03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
109296368 (CPSF6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSLD_CPSF6
RRM_1
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
109296368
NCBI-ProteinID:
XP_019371325
LinkDB
All DBs
Position
Unknown
AA seq
586 aa
AA seq
DB search
MEFISIILVEAGTEKSLNGFDIQEAEYGGHDQIDLYDDVISPSANNGDAPEDRDYMDSLP
PSVGDDVGKGAAPNVVYTYTGKRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFEN
RANGQSKGFALVGVGSEASSKKLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQSRKTTQS
GQMSGEGKAGPPGGSSRAAFPPTNRGRGRFPGSIPGADRFPGPAGPGGPPPPFPAGQNPP
RPPLGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPP
PPVPGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLTGPPPSGPPPAPHV
NPAFFPPPANSGIPTSDSRGPPPTDPYGRPPPYDRGDYGPPGRRFTGNNMSIREKLHIPF
YGRHTKNNTQNSGREMDAARTPLSEAEFEEIMNRNRAISSSAISRAVSDASAGDYGSAIE
TLVTAISLIKQSKVSADDRCKVLISSLQDCLHGIESKSYGSGSRRRERSRERDHSRSREK
SRRHKSRSRDRHDDYYRERSRERERHRDRDRDRDRERDREREYRHR
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggaattcatctccattatcttagttgaggcaggaactgaaaaatctttgaatgggttt
gatattcaagaagctgaatatggtggacatgatcagattgatttgtatgatgatgtcatt
tctccatctgcaaataatggagatgccccagaggaccgtgattatatggactctctccca
ccatctgtgggagatgatgtaggtaaaggagcagcaccaaatgtggtctatacctatact
ggaaagagaattgcattatacattgggaatcttacctggtggacaacagatgaagactta
actgaagcagttcattctctgggagttaatgatattttggagataaaattttttgaaaat
cgtgctaatggccagtcaaaagggtttgctcttgtaggtgttgggtctgaagcatcctca
aaaaagctgatggatctgttgcctaaaagagaactgcatgggcagaatcctgttgtaact
ccatgtaataaacagttcctgagtcaatttgaaatgcagtcaaggaaaactacacagtca
ggtcagatgtctggagaaggtaaagctggtcctccaggaggtagttcacgtgcagcattt
ccaccaactaacagaggacgaggccgttttccaggttccattccaggtgcggacagattt
cctggacctgcagggccaggaggaccaccgcctccttttccagctggacagaatccaccg
cgtccacccctaggtcctcctggtccaccaggccctccaggtccccctcctcctggtcag
gttcttcctcctccattagctgggcctcctaatcgcggtgaccgtcctcctcctccagtt
ctgtttcctggacaaccctttggtcaacctccactggggccacttcctcctggacctcca
cctcccgttccaggctatggcccacctccaggtccaccgccaccacaacagggtccacct
cctccaccaggcccttttccccctcgaccccctggtcctcttgggccacccctgacactt
gctcctcctccacatcttactgggccacctccaagtggtcccccacctgcaccacatgtg
aatccagctttcttccccccacctgccaatagtggtatacctacttcagacagccgtggt
ccaccaccaacagatccatatggtcgacctccaccatatgacagaggtgactatgggcca
cctggaaggcgtttcactggaaataacatgtccataagagaaaaattacatattccattc
tatgggaggcacacgaaaaataatactcaaaactcagggagagagatggatgctgcaaga
acacccttaagtgaagcagagtttgaagaaatcatgaacagaaatagggccatctcaagc
agtgccatttcaagagctgtgtcagatgccagtgctggtgactatggaagtgctatagaa
accttagtaactgcaatttccttaattaaacaatccaaagtatctgctgatgatcgttgt
aaagtacttattagctctcttcaggattgtcttcatggaattgagtccaagtcttacgga
tctggatcaagaagacgtgaacgatcaagggagagggaccacagtaggtcgagagaaaaa
agcagacgtcacaagtcccgtagcagagatcgtcacgatgactattaccgggaaagaagc
cgtgagcgagagagacatcgtgatcgtgacagagatcgcgacagagagcgtgacagagaa
cgagagtatcgtcatcgttaa
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integrated database retrieval system
