Gavialis gangeticus (Gharial): 109296508
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Entry
109296508 CDS
T07453
Symbol
NUP50
Name
(RefSeq) nuclear pore complex protein Nup50
KO
K14295
nuclear pore complex protein Nup50
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109296508 (NUP50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ggn03019
]
109296508 (NUP50)
Messenger RNA biogenesis [BR:
ggn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109296508 (NUP50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUP50
Ran_BP1
Motif
Other DBs
NCBI-GeneID:
109296508
NCBI-ProteinID:
XP_019371463
LinkDB
All DBs
Position
Unknown
AA seq
472 aa
AA seq
DB search
MAKRIAEKELTDRNWDQEDEAEEVGTFSIASEEVLKNRAIKKAKRRNVASESESGGAFKG
FKGFIIPSAKGGGGFTGFGNGTGLKPLEGLSNGSSGISNTAPLICLKTTSGTPPVFGSPT
SNGPTATGLVEKKTASPKANGGSQQSSSGYSQSKMCNCSLYYEHLTALNCSVRDWIVKHV
NTNPLCDLTPIFRDYEKYLANIEQQYGSGSDSSSENENNKTTPGTQSVPTFGTSKLQQGS
TFLFNSNKTEDASDKKMESVSEKNREPTPGVASNVSFNFGKKVDSSVLGSLGSGTLSSFS
FSPGNSRLFGKDTSQTKSVTPLPTSVLEAQTESGSSDDKGGDEDEEEPPKVVVNEIKEDD
AFYSKKCKLFYKKNNEFKEKGIGTLHLKPAGNEKTQLLVRADTNLGNILLNVLIPPKMPC
TRTGKNNVLIVCVPNPPVDEKNPTVPITILIRVKTSEDADELHKILLEKKEA
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagagaattgcagagaaggagttgacagacaggaattgggatcaagaggatgaa
gctgaggaggtgggaactttttcaatagctagtgaagaagtcctgaagaacagagctatt
aagaaagcaaagcgccgaaatgttgcgtctgagtctgaaagtggaggagcttttaaaggg
tttaaaggtttcattataccttctgcaaaaggaggaggtggcttcactggatttggtaat
ggtacaggattaaagcctttagaagggctgtctaatggaagcagtggcatttctaatact
gcacctttaatctgtttaaagacaacttctggaaccccgcctgtatttgggtctcctaca
tccaatggtccaactgctactggcttggttgagaaaaagactgcaagtccaaaagctaat
ggtggcagtcagcagtcatcatctggttactctcagagtaaaatgtgcaactgtagtctt
tattatgaacatttaactgcactaaactgttctgtgcgtgactggatagtaaagcatgtg
aacacaaatccactgtgtgatctgacacctatctttagagactatgagaaatatttagca
aacattgaacaacagtatggaagcggtagtgatagcagctctgagaatgaaaataacaag
acaacacctggaactcagtctgttcctacatttgggacttcaaaacttcagcaaggatca
acatttttgtttaacagcaacaaaactgaggatgcatcagacaagaaaatggaatctgtg
tcagaaaagaacagagaaccaacaccaggagttgcatcaaatgtctcatttaattttggc
aagaaagttgacagttctgttttgggttcccttggttctggaacgctaagtagtttctcc
ttctctcctgggaattcccgtctatttggaaaagatacaagtcagacaaagtctgttact
ccacttccaaccagtgtattggaggctcagacagaaagtggtagtagtgatgataaagga
ggagatgaggatgaggaggagccacccaaagtagttgttaatgaaataaaggaagatgat
gctttctactctaagaagtgtaaactgttctacaaaaaaaataatgaatttaaagaaaag
ggcataggaacactgcacttgaagcctgcaggaaacgagaaaactcagctgttagtgcga
gcagataccaatttaggcaacatactcttgaatgttttgattccacccaagatgccatgc
acaagaacaggaaaaaacaacgttcttattgtctgtgttcccaatccaccagttgatgag
aagaaccccactgtccccatcactatcttaataagagtgaaaacaagtgaagatgcagat
gagttgcacaaaatcttactggagaaaaaggaggcttaa
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